RNA–Protein interactions for RNA: ENST00000221554.12

CCDC130-201, Transcript of coiled-coil domain containing 130, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC130, Length 1,792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-201ENST00000221554 RBM25P49756 843 aaKnown RBP26.31■■□□□ 1.8
CCDC130-201ENST00000221554 HSP90AB2PQ58FF8 381 aa26.31■■□□□ 1.8
CCDC130-201ENST00000221554 DCTN1Q14203 1278 aa26.3■■□□□ 1.8
CCDC130-201ENST00000221554 NGDNQ8NEJ9 315 aaKnown RBP26.3■■□□□ 1.8
CCDC130-201ENST00000221554 HTATSF1O43719 755 aaKnown RBP26.29■■□□□ 1.8
CCDC130-201ENST00000221554 KDRP35968 1356 aa26.28■■□□□ 1.8
CCDC130-201ENST00000221554 RPAP2Q8IXW5 612 aaPredicted RBP26.28■■□□□ 1.8
CCDC130-201ENST00000221554 GAS2L2Q8NHY3 880 aa26.28■■□□□ 1.8
CCDC130-201ENST00000221554 RTF1Q92541 710 aaKnown RBP26.28■■□□□ 1.8
CCDC130-201ENST00000221554 MAP3K19Q56UN5 1328 aa26.27■■□□□ 1.8
CCDC130-201ENST00000221554 FMN2Q9NZ56 1722 aa26.27■■□□□ 1.8
CCDC130-201ENST00000221554 CRB1P82279 1406 aa26.27■■□□□ 1.8
CCDC130-201ENST00000221554 NUTM2FA1L443 756 aa26.26■■□□□ 1.79
CCDC130-201ENST00000221554 SIRT2Q8IXJ6 389 aa26.26■■□□□ 1.79
CCDC130-201ENST00000221554 XRN1Q8IZH2 1706 aaKnown RBP26.25■■□□□ 1.79
CCDC130-201ENST00000221554 HSCBQ8IWL3 235 aa26.25■■□□□ 1.79
CCDC130-201ENST00000221554 SNX21Q969T3 373 aa26.25■■□□□ 1.79
CCDC130-201ENST00000221554 DCTPP1Q9H773 170 aa26.25■■□□□ 1.79
CCDC130-201ENST00000221554 NPHP4O75161 1426 aaPredicted RBP26.24■■□□□ 1.79
CCDC130-201ENST00000221554 AMPHP49418 695 aa26.23■■□□□ 1.79
CCDC130-201ENST00000221554 MCM10Q7L590 875 aa26.23■■□□□ 1.79
CCDC130-201ENST00000221554 SLKQ9H2G2 1235 aaPredicted RBP26.23■■□□□ 1.79
CCDC130-201ENST00000221554 IGSF1Q8N6C5 1336 aa26.23■■□□□ 1.79
CCDC130-201ENST00000221554 ANKRD44Q8N8A2 993 aa26.23■■□□□ 1.79
CCDC130-201ENST00000221554 C1orf115Q9H7X2 142 aa26.23■■□□□ 1.79
CCDC130-201ENST00000221554 SOS1Q07889 1333 aaPredicted RBP26.22■■□□□ 1.79
CCDC130-201ENST00000221554 CHMP5Q9NZZ3 219 aa26.21■■□□□ 1.79
CCDC130-201ENST00000221554 USP54Q70EL1 1684 aa26.2■■□□□ 1.78
CCDC130-201ENST00000221554 RGS12O14924 1447 aa26.19■■□□□ 1.78
CCDC130-201ENST00000221554 BABAM1Q9NWV8 329 aa26.19■■□□□ 1.78
CCDC130-201ENST00000221554 MTHFSDQ2M296 383 aaKnown RBP26.18■■□□□ 1.78
CCDC130-201ENST00000221554 PIK3C2AO00443 1686 aa26.17■■□□□ 1.78
CCDC130-201ENST00000221554 CDC45O75419 566 aa26.17■■□□□ 1.78
CCDC130-201ENST00000221554 TSPYL4Q9UJ04 414 aa26.17■■□□□ 1.78
CCDC130-201ENST00000221554 CCT4P50991 539 aaKnown RBP26.16■■□□□ 1.78
CCDC130-201ENST00000221554 EYA1Q99502 592 aa26.16■■□□□ 1.78
CCDC130-201ENST00000221554 NLRP6P59044 892 aa26.15■■□□□ 1.78
CCDC130-201ENST00000221554 STRCP1A6NGW2 1772 aa26.15■■□□□ 1.78
CCDC130-201ENST00000221554 HMMRO75330 724 aa26.15■■□□□ 1.78
CCDC130-201ENST00000221554 SLC4A2P04920 1241 aa26.15■■□□□ 1.78
CCDC130-201ENST00000221554 RTL1A6NKG5 1358 aa26.14■■□□□ 1.78
CCDC130-201ENST00000221554 RGPD8O14715 1765 aaPredicted RBP26.14■■□□□ 1.77
CCDC130-201ENST00000221554 CHD2O14647 1828 aaKnown RBP26.14■■□□□ 1.77
CCDC130-201ENST00000221554 SOX12O15370 315 aa26.13■■□□□ 1.77
CCDC130-201ENST00000221554 ATP10DQ9P241 1426 aa26.13■■□□□ 1.77
CCDC130-201ENST00000221554 CEP85Q6P2H3 762 aa26.12■■□□□ 1.77
CCDC130-201ENST00000221554 TBC1D9Q6ZT07 1266 aa26.12■■□□□ 1.77
CCDC130-201ENST00000221554 PLEKHM2Q8IWE5 1019 aa26.12■■□□□ 1.77
CCDC130-201ENST00000221554 STK31Q9BXU1 1019 aa26.12■■□□□ 1.77
CCDC130-201ENST00000221554 CIZ1Q9ULV3 898 aaPredicted RBP26.12■■□□□ 1.77
CCDC130-201ENST00000221554 NCOA3Q9Y6Q9 1424 aa26.11■■□□□ 1.77
CCDC130-201ENST00000221554 GNAT3A8MTJ3 354 aa26.11■■□□□ 1.77
CCDC130-201ENST00000221554 KRT24Q2M2I5 525 aa26.11■■□□□ 1.77
CCDC130-201ENST00000221554 HOXC9P31274 260 aa26.1■■□□□ 1.77
CCDC130-201ENST00000221554 KCNA6P17658 529 aa26.1■■□□□ 1.77
CCDC130-201ENST00000221554 MSH6P52701 1360 aa26.09■■□□□ 1.77
CCDC130-201ENST00000221554 TTC22Q5TAA0 569 aa26.09■■□□□ 1.77
CCDC130-201ENST00000221554 CCDC30Q5VVM6 783 aa26.09■■□□□ 1.77
CCDC130-201ENST00000221554 LRRC37A3O60309 1634 aa26.08■■□□□ 1.77
CCDC130-201ENST00000221554 CHMP4AQ9BY43 222 aa26.08■■□□□ 1.77
CCDC130-201ENST00000221554 CASC1Q6TDU7 716 aa26.07■■□□□ 1.76
CCDC130-201ENST00000221554 FOXO3O43524 673 aa26.07■■□□□ 1.76
CCDC130-201ENST00000221554 MCM4P33991 863 aa26.06■■□□□ 1.76
CCDC130-201ENST00000221554 ABTB2Q8N961 1025 aa26.06■■□□□ 1.76
CCDC130-201ENST00000221554 MAP3K5Q99683 1374 aa26.04■■□□□ 1.76
CCDC130-201ENST00000221554 HSP90AB1P08238 724 aaKnown RBP26.04■■□□□ 1.76
CCDC130-201ENST00000221554 MEIS3Q99687 375 aa26.04■■□□□ 1.76
CCDC130-201ENST00000221554 GNAI3P08754 354 aa26.03■■□□□ 1.76
CCDC130-201ENST00000221554 DDIT3P35638 169 aa26.03■■□□□ 1.76
CCDC130-201ENST00000221554 MARF1Q9Y4F3 1742 aaKnown RBP26.03■■□□□ 1.76
CCDC130-201ENST00000221554 DDX11L8A8MPP1 907 aa26.02■■□□□ 1.76
CCDC130-201ENST00000221554 GSPT1P15170 499 aaKnown RBP26.02■■□□□ 1.76
CCDC130-201ENST00000221554 PTMSP20962 102 aa26.02■■□□□ 1.76
CCDC130-201ENST00000221554 TAF7Q15545 349 aaPredicted RBP26.02■■□□□ 1.76
CCDC130-201ENST00000221554 L1TD1Q5T7N2 865 aaKnown RBP26.02■■□□□ 1.76
CCDC130-201ENST00000221554 KIF2CQ99661 725 aa26.02■■□□□ 1.76
CCDC130-201ENST00000221554 PHF8Q9UPP1 1060 aa26.02■■□□□ 1.76
CCDC130-201ENST00000221554 CACNA1FO60840 1977 aa26.02■■□□□ 1.76
CCDC130-201ENST00000221554 ZNF335Q9H4Z2 1342 aaPredicted RBP26.02■■□□□ 1.76
CCDC130-201ENST00000221554 GNAI2P04899 355 aa26.02■■□□□ 1.76
CCDC130-201ENST00000221554 MIS18AQ9NYP9 233 aa26.02■■□□□ 1.76
CCDC130-201ENST00000221554 NWD1Q149M9 1564 aa26.01■■□□□ 1.75
CCDC130-201ENST00000221554 SPRYD3Q8NCJ5 442 aa26■■□□□ 1.75
CCDC130-201ENST00000221554 OSBPL3Q9H4L5 887 aa26■■□□□ 1.75
CCDC130-201ENST00000221554 K7ELQ4 463 aaPredicted RBP25.99■■□□□ 1.75
CCDC130-201ENST00000221554 RABEP1Q15276 862 aa25.99■■□□□ 1.75
CCDC130-201ENST00000221554 KCNH5Q8NCM2 988 aa25.98■■□□□ 1.75
CCDC130-201ENST00000221554 IP6K1Q92551 441 aa25.98■■□□□ 1.75
CCDC130-201ENST00000221554 PXDNLA1KZ92 1463 aa25.98■■□□□ 1.75
CCDC130-201ENST00000221554 XIRP1Q702N8 1843 aaKnown RBP25.97■■□□□ 1.75
CCDC130-201ENST00000221554 FLIIQ13045 1269 aa25.97■■□□□ 1.75
CCDC130-201ENST00000221554 SLC4A10Q6U841 1118 aa25.97■■□□□ 1.75
CCDC130-201ENST00000221554 G2E3Q7L622 706 aa25.97■■□□□ 1.75
CCDC130-201ENST00000221554 REC8O95072 547 aa25.95■■□□□ 1.74
CCDC130-201ENST00000221554 HSP90AA1P07900 732 aaKnown RBP25.95■■□□□ 1.74
CCDC130-201ENST00000221554 IL17REQ8NFR9 667 aa25.95■■□□□ 1.74
CCDC130-201ENST00000221554 GBP4Q96PP9 640 aa25.95■■□□□ 1.74
CCDC130-201ENST00000221554 FAM208AQ9UK61 1670 aaKnown RBP25.94■■□□□ 1.74
CCDC130-201ENST00000221554 LTBP4Q8N2S1 1624 aa25.94■■□□□ 1.74
CCDC130-201ENST00000221554 FKBP5Q13451 457 aaPredicted RBP25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms