RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 SERPINC1P01008 464 aa12.44□□□□□ -0.42
TRPS1-201ENST00000220888 ME1P48163 572 aa12.44□□□□□ -0.42
TRPS1-201ENST00000220888 CLEC11AQ9Y240 323 aa12.44□□□□□ -0.42
TRPS1-201ENST00000220888 PLEKHH2Q8IVE3 1493 aa12.43□□□□□ -0.42
TRPS1-201ENST00000220888 ZNF622Q969S3 477 aaKnown RBP eCLIP12.43□□□□□ -0.422e-8■□□□□ 10.5
TRPS1-201ENST00000220888 RRS1Q15050 365 aaKnown RBP12.43□□□□□ -0.42
TRPS1-201ENST00000220888 RPGRIP1LQ68CZ1 1315 aa12.43□□□□□ -0.42
TRPS1-201ENST00000220888 GNAT3A8MTJ3 354 aa12.43□□□□□ -0.42
TRPS1-201ENST00000220888 CETN2P41208 172 aa12.43□□□□□ -0.42
TRPS1-201ENST00000220888 MYO1BO43795 1136 aa12.42□□□□□ -0.42
TRPS1-201ENST00000220888 IMMTQ16891 758 aaKnown RBP12.42□□□□□ -0.42
TRPS1-201ENST00000220888 AEBP1Q8IUX7 1158 aa12.42□□□□□ -0.42
TRPS1-201ENST00000220888 WIZO95785 1651 aa12.42□□□□□ -0.42
TRPS1-201ENST00000220888 ZNF444Q8N0Y2 327 aaPredicted RBP12.42□□□□□ -0.42
TRPS1-201ENST00000220888 TRMT112Q9UI30 125 aaKnown RBP12.42□□□□□ -0.42
TRPS1-201ENST00000220888 IGF1RP08069 1367 aa12.42□□□□□ -0.42
TRPS1-201ENST00000220888 ATAD2Q6PL18 1390 aa12.42□□□□□ -0.42
TRPS1-201ENST00000220888 UBAP1LF5GYI3 381 aa12.42□□□□□ -0.42
TRPS1-201ENST00000220888 FIBPO43427 364 aa12.42□□□□□ -0.42
TRPS1-201ENST00000220888 TOM1O60784 492 aa12.42□□□□□ -0.42
TRPS1-201ENST00000220888 MAP7D2Q96T17 732 aa12.42□□□□□ -0.42
TRPS1-201ENST00000220888 MPHOSPH6Q99547 160 aaKnown RBP12.42□□□□□ -0.42
TRPS1-201ENST00000220888 NOB1Q9ULX3 412 aaKnown RBP12.42□□□□□ -0.42
TRPS1-201ENST00000220888 LRPPRCP42704 1394 aaKnown RBP12.42□□□□□ -0.42
TRPS1-201ENST00000220888 BLOC1S2Q6QNY1 142 aa12.41□□□□□ -0.42
TRPS1-201ENST00000220888 FGD6Q6ZV73 1430 aa12.41□□□□□ -0.42
TRPS1-201ENST00000220888 MINDY4BA8MYZ0 360 aa12.41□□□□□ -0.42
TRPS1-201ENST00000220888 MAP4K4O95819 1239 aaPredicted RBP12.41□□□□□ -0.42
TRPS1-201ENST00000220888 PPP2R1AP30153 589 aa12.41□□□□□ -0.42
TRPS1-201ENST00000220888 NUDT16Q96DE0 195 aaKnown RBP12.41□□□□□ -0.42
TRPS1-201ENST00000220888 PPP6R1Q9UPN7 881 aa12.41□□□□□ -0.42
TRPS1-201ENST00000220888 CCDC61Q9Y6R9 512 aa12.41□□□□□ -0.42
TRPS1-201ENST00000220888 MBD3O95983 291 aa12.41□□□□□ -0.42
TRPS1-201ENST00000220888 RABEP1Q15276 862 aa12.41□□□□□ -0.42
TRPS1-201ENST00000220888 CEP57L1Q8IYX8 460 aa12.41□□□□□ -0.42
TRPS1-201ENST00000220888 GOLGA6L10A6NI86 522 aa12.4□□□□□ -0.42
TRPS1-201ENST00000220888 CA8P35219 290 aa12.4□□□□□ -0.42
TRPS1-201ENST00000220888 KRT32Q14532 448 aa12.4□□□□□ -0.42
TRPS1-201ENST00000220888 TSR2Q969E8 191 aaKnown RBP12.4□□□□□ -0.42
TRPS1-201ENST00000220888 SLC5A1P13866 664 aa12.4□□□□□ -0.42
TRPS1-201ENST00000220888 ENOX2Q16206 610 aaKnown RBP12.4□□□□□ -0.42
TRPS1-201ENST00000220888 CABP5Q9NP86 173 aa12.4□□□□□ -0.42
TRPS1-201ENST00000220888 RFC4P35249 363 aa12.4□□□□□ -0.42
TRPS1-201ENST00000220888 IFIT5Q13325 482 aaKnown RBP12.4□□□□□ -0.42
TRPS1-201ENST00000220888 GSE1Q14687 1217 aa12.4□□□□□ -0.42
TRPS1-201ENST00000220888 AMOTQ4VCS5 1084 aa12.4□□□□□ -0.42
TRPS1-201ENST00000220888 LARP1Q6PKG0 1096 aaKnown RBP12.4□□□□□ -0.42
TRPS1-201ENST00000220888 CCDC150Q8NCX0 1101 aa12.4□□□□□ -0.42
TRPS1-201ENST00000220888 HFM1A2PYH4 1435 aa12.4□□□□□ -0.43
TRPS1-201ENST00000220888 ANAPC15P60006 121 aa12.39□□□□□ -0.43
TRPS1-201ENST00000220888 MAP3K12Q12852 859 aa12.39□□□□□ -0.43
TRPS1-201ENST00000220888 VTI1AQ96AJ9 217 aa12.39□□□□□ -0.43
TRPS1-201ENST00000220888 CCDC7Q96M83 1385 aa12.39□□□□□ -0.43
TRPS1-201ENST00000220888 DHX8Q14562 1220 aaKnown RBP12.39□□□□□ -0.43
TRPS1-201ENST00000220888 CEP131Q9UPN4 1083 aa12.39□□□□□ -0.43
TRPS1-201ENST00000220888 PHF8Q9UPP1 1060 aa12.39□□□□□ -0.43
TRPS1-201ENST00000220888 H0YHG0 523 aa12.39□□□□□ -0.43
TRPS1-201ENST00000220888 RNF214Q8ND24 703 aa12.39□□□□□ -0.43
TRPS1-201ENST00000220888 FOXO3O43524 673 aa12.38□□□□□ -0.43
TRPS1-201ENST00000220888 GBP2P32456 591 aaPredicted RBP12.38□□□□□ -0.43
TRPS1-201ENST00000220888 DDX46Q7L014 1031 aaKnown RBP12.38□□□□□ -0.43
TRPS1-201ENST00000220888 ST5P78524 1137 aa12.38□□□□□ -0.43
TRPS1-201ENST00000220888 WDR70Q9NW82 654 aa12.38□□□□□ -0.43
TRPS1-201ENST00000220888 LDHCP07864 332 aa12.38□□□□□ -0.43
TRPS1-201ENST00000220888 AXDND1Q5T1B0 1012 aaPredicted RBP12.38□□□□□ -0.43
TRPS1-201ENST00000220888 CCDC112Q8NEF3 446 aa12.38□□□□□ -0.43
TRPS1-201ENST00000220888 CTCFLQ8NI51 663 aaPredicted RBP12.38□□□□□ -0.43
TRPS1-201ENST00000220888 POLD1P28340 1107 aa12.38□□□□□ -0.43
TRPS1-201ENST00000220888 HSP90AA2PQ14568 343 aaPredicted RBP12.38□□□□□ -0.43
TRPS1-201ENST00000220888 NAPBQ9H115 298 aa12.38□□□□□ -0.43
TRPS1-201ENST00000220888 NBPF8Q3BBV2 869 aa12.37□□□□□ -0.43
TRPS1-201ENST00000220888 NBPF14Q5TI25 921 aa12.37□□□□□ -0.43
TRPS1-201ENST00000220888 JAKMIP3Q5VZ66 844 aa12.37□□□□□ -0.43
TRPS1-201ENST00000220888 LARP1BQ659C4 914 aaKnown RBP12.37□□□□□ -0.43
TRPS1-201ENST00000220888 RAB34Q9BZG1 259 aa12.37□□□□□ -0.43
TRPS1-201ENST00000220888 ANKRD18BA2A2Z9 1011 aa12.37□□□□□ -0.43
TRPS1-201ENST00000220888 CCDC39Q9UFE4 941 aa12.37□□□□□ -0.43
TRPS1-201ENST00000220888 BRD4O60885 1362 aaPredicted RBP12.37□□□□□ -0.43
TRPS1-201ENST00000220888 A0A087WZG4 1122 aa12.37□□□□□ -0.43
TRPS1-201ENST00000220888 KRT85P78386 507 aa12.37□□□□□ -0.43
TRPS1-201ENST00000220888 MYD88Q99836 296 aa12.37□□□□□ -0.43
TRPS1-201ENST00000220888 NF2P35240 595 aa12.36□□□□□ -0.43
TRPS1-201ENST00000220888 EIF5P55010 431 aaKnown RBP12.36□□□□□ -0.43
TRPS1-201ENST00000220888 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.36□□□□□ -0.43
TRPS1-201ENST00000220888 IQCA1Q86XH1 822 aa12.36□□□□□ -0.43
TRPS1-201ENST00000220888 TEX13AQ9BXU3 409 aaPredicted RBP12.36□□□□□ -0.43
TRPS1-201ENST00000220888 UBA5Q9GZZ9 404 aa12.36□□□□□ -0.43
TRPS1-201ENST00000220888 CBFA2T2O43439 604 aa12.36□□□□□ -0.43
TRPS1-201ENST00000220888 HLA-DOAP06340 250 aa12.36□□□□□ -0.43
TRPS1-201ENST00000220888 CT47B1P0C2W7 299 aaPredicted RBP12.36□□□□□ -0.43
TRPS1-201ENST00000220888 CALRP27797 417 aaKnown RBP12.36□□□□□ -0.43
TRPS1-201ENST00000220888 CDC5LQ99459 802 aaKnown RBP12.36□□□□□ -0.43
TRPS1-201ENST00000220888 CCDC196A0A1B0GTZ2 297 aa12.36□□□□□ -0.43
TRPS1-201ENST00000220888 RANBP6O60518 1105 aaKnown RBP12.36□□□□□ -0.43
TRPS1-201ENST00000220888 LIG1P18858 919 aa12.36□□□□□ -0.43
TRPS1-201ENST00000220888 ERBINQ96RT1 1412 aa12.36□□□□□ -0.43
TRPS1-201ENST00000220888 EPB41L2O43491 1005 aaKnown RBP12.36□□□□□ -0.43
TRPS1-201ENST00000220888 BCAR3O75815 825 aa12.36□□□□□ -0.43
TRPS1-201ENST00000220888 TAX1BP1Q86VP1 789 aa12.36□□□□□ -0.43
TRPS1-201ENST00000220888 TAF4BQ92750 862 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms