RNA–Protein interactions for RNA: ENST00000199706.12

MRPL28-201, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL28, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-201ENST00000199706 TATP17735 454 aaPredicted RBP23.64■■□□□ 1.37
MRPL28-201ENST00000199706 ZCRB1Q8TBF4 217 aaKnown RBP23.64■■□□□ 1.37
MRPL28-201ENST00000199706 EYA1Q99502 592 aa23.64■■□□□ 1.37
MRPL28-201ENST00000199706 DEFB132Q7Z7B7 95 aa23.63■■□□□ 1.37
MRPL28-201ENST00000199706 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.63■■□□□ 1.37
MRPL28-201ENST00000199706 USHBP1Q8N6Y0 703 aa23.62■■□□□ 1.37
MRPL28-201ENST00000199706 PCDH11XQ9BZA7 1347 aa23.61■■□□□ 1.37
MRPL28-201ENST00000199706 PCDH11YQ9BZA8 1340 aa23.61■■□□□ 1.37
MRPL28-201ENST00000199706 KDRP35968 1356 aa23.61■■□□□ 1.37
MRPL28-201ENST00000199706 MTHFSP49914 203 aa23.6■■□□□ 1.37
MRPL28-201ENST00000199706 CAMKK2Q96RR4 588 aa23.6■■□□□ 1.37
MRPL28-201ENST00000199706 PLSCR1O15162 318 aa23.59■■□□□ 1.37
MRPL28-201ENST00000199706 APBA3O96018 575 aa23.59■■□□□ 1.37
MRPL28-201ENST00000199706 COL3A1P02461 1466 aaPredicted RBP23.59■■□□□ 1.37
MRPL28-201ENST00000199706 DOT1LQ8TEK3 1739 aa23.59■■□□□ 1.37
MRPL28-201ENST00000199706 IL13P35225 146 aa23.58■■□□□ 1.37
MRPL28-201ENST00000199706 BTAF1O14981 1849 aa23.57■■□□□ 1.36
MRPL28-201ENST00000199706 NUP188Q5SRE5 1749 aa23.57■■□□□ 1.36
MRPL28-201ENST00000199706 EN1Q05925 392 aaPredicted RBP23.56■■□□□ 1.36
MRPL28-201ENST00000199706 DDX54Q8TDD1 881 aaKnown RBP23.55■■□□□ 1.36
MRPL28-201ENST00000199706 SPG7Q9UQ90 795 aa23.55■■□□□ 1.36
MRPL28-201ENST00000199706 KAT6BQ8WYB5 2073 aa23.53■■□□□ 1.36
MRPL28-201ENST00000199706 CYP27B1O15528 508 aa23.51■■□□□ 1.35
MRPL28-201ENST00000199706 DIAPH1O60610 1272 aaKnown RBP23.51■■□□□ 1.35
MRPL28-201ENST00000199706 NKX1-1Q15270 411 aaPredicted RBP23.51■■□□□ 1.35
MRPL28-201ENST00000199706 EZH2Q15910 746 aaKnown RBP23.51■■□□□ 1.35
MRPL28-201ENST00000199706 TOGARAM1Q9Y4F4 1720 aa23.5■■□□□ 1.35
MRPL28-201ENST00000199706 KCNQ2O43526 872 aa23.49■■□□□ 1.35
MRPL28-201ENST00000199706 AMOTQ4VCS5 1084 aa23.49■■□□□ 1.35
MRPL28-201ENST00000199706 PTF1AQ7RTS3 328 aa23.49■■□□□ 1.35
MRPL28-201ENST00000199706 PPP2R1AP30153 589 aa23.48■■□□□ 1.35
MRPL28-201ENST00000199706 CFAP53Q96M91 514 aa23.47■■□□□ 1.35
MRPL28-201ENST00000199706 LY75O60449 1722 aa23.47■■□□□ 1.35
MRPL28-201ENST00000199706 ITGB4P16144 1822 aa23.47■■□□□ 1.35
MRPL28-201ENST00000199706 SULT6B1Q6IMI4 303 aa23.46■■□□□ 1.35
MRPL28-201ENST00000199706 IFNL2Q8IZJ0 200 aa23.46■■□□□ 1.35
MRPL28-201ENST00000199706 ACSBG1Q96GR2 724 aa23.46■■□□□ 1.35
MRPL28-201ENST00000199706 PLEKHO1Q53GL0 409 aaPredicted RBP23.45■■□□□ 1.34
MRPL28-201ENST00000199706 AEBP1Q8IUX7 1158 aa23.45■■□□□ 1.34
MRPL28-201ENST00000199706 PHKG2P15735 406 aa23.44■■□□□ 1.34
MRPL28-201ENST00000199706 HSP90AB1P08238 724 aaKnown RBP23.43■■□□□ 1.34
MRPL28-201ENST00000199706 PRIM1P49642 420 aaKnown RBP23.43■■□□□ 1.34
MRPL28-201ENST00000199706 DDX10Q13206 875 aaKnown RBP23.43■■□□□ 1.34
MRPL28-201ENST00000199706 RALBP1Q15311 655 aa23.43■■□□□ 1.34
MRPL28-201ENST00000199706 PAPPAQ13219 1627 aa23.43■■□□□ 1.34
MRPL28-201ENST00000199706 TXNRD1Q16881 649 aa23.41■■□□□ 1.34
MRPL28-201ENST00000199706 PROM2Q8N271 834 aa23.41■■□□□ 1.34
MRPL28-201ENST00000199706 NBPF14Q5TI25 921 aa23.4■■□□□ 1.34
MRPL28-201ENST00000199706 CNGB1Q14028 1251 aaPredicted RBP23.39■■□□□ 1.33
MRPL28-201ENST00000199706 SLC27A3Q5K4L6 730 aa23.39■■□□□ 1.33
MRPL28-201ENST00000199706 ADAMTS7Q9UKP4 1686 aa23.38■■□□□ 1.33
MRPL28-201ENST00000199706 SYTL4Q96C24 671 aaPredicted RBP23.38■■□□□ 1.33
MRPL28-201ENST00000199706 DCAF5Q96JK2 942 aa23.38■■□□□ 1.33
MRPL28-201ENST00000199706 NUDCQ9Y266 331 aa23.38■■□□□ 1.33
MRPL28-201ENST00000199706 SCN11AQ9UI33 1791 aa23.37■■□□□ 1.33
MRPL28-201ENST00000199706 HMGB2P26583 209 aaKnown RBP23.37■■□□□ 1.33
MRPL28-201ENST00000199706 ZNF530Q6P9A1 599 aaPredicted RBP23.37■■□□□ 1.33
MRPL28-201ENST00000199706 SRCAPQ6ZRS2 3230 aa23.37■■□□□ 1.33
MRPL28-201ENST00000199706 KDM6AO15550 1401 aaPredicted RBP23.36■■□□□ 1.33
MRPL28-201ENST00000199706 ERVV-2B6SEH9 535 aa23.36■■□□□ 1.33
MRPL28-201ENST00000199706 LRP5O75197 1615 aa23.36■■□□□ 1.33
MRPL28-201ENST00000199706 C1orf141Q5JVX7 400 aa23.35■■□□□ 1.33
MRPL28-201ENST00000199706 QSER1Q2KHR3 1735 aa23.34■■□□□ 1.33
MRPL28-201ENST00000199706 HMOX1P09601 288 aa23.34■■□□□ 1.33
MRPL28-201ENST00000199706 ZNF831Q5JPB2 1677 aa23.33■■□□□ 1.33
MRPL28-201ENST00000199706 MRC1P22897 1456 aa23.33■■□□□ 1.33
MRPL28-201ENST00000199706 U2SURPO15042 1029 aaKnown RBP23.33■■□□□ 1.33
MRPL28-201ENST00000199706 AKAP4Q5JQC9 854 aa23.33■■□□□ 1.33
MRPL28-201ENST00000199706 SMARCC1Q92922 1105 aaPredicted RBP23.33■■□□□ 1.33
MRPL28-201ENST00000199706 VIRMAQ69YN4 1812 aaKnown RBP23.33■■□□□ 1.32
MRPL28-201ENST00000199706 TMOD3Q9NYL9 352 aa23.32■■□□□ 1.32
MRPL28-201ENST00000199706 MYBBP1AQ9BQG0 1328 aaKnown RBP23.32■■□□□ 1.32
MRPL28-201ENST00000199706 PALLDQ8WX93 1383 aa23.31■■□□□ 1.32
MRPL28-201ENST00000199706 ZNF316A6NFI3 1004 aaPredicted RBP23.31■■□□□ 1.32
MRPL28-201ENST00000199706 R3HDM1Q15032 1099 aaKnown RBP23.31■■□□□ 1.32
MRPL28-201ENST00000199706 MPRIPQ6WCQ1 1025 aa23.31■■□□□ 1.32
MRPL28-201ENST00000199706 PIGBQ92521 554 aa23.31■■□□□ 1.32
MRPL28-201ENST00000199706 RSPH6AQ9H0K4 717 aa23.31■■□□□ 1.32
MRPL28-201ENST00000199706 CASZ1Q86V15 1759 aa23.31■■□□□ 1.32
MRPL28-201ENST00000199706 FCHSD2O94868 740 aa23.3■■□□□ 1.32
MRPL28-201ENST00000199706 ANO8Q9HCE9 1232 aaPredicted RBP23.3■■□□□ 1.32
MRPL28-201ENST00000199706 TAF1LQ8IZX4 1826 aa23.3■■□□□ 1.32
MRPL28-201ENST00000199706 C5P01031 1676 aa23.29■■□□□ 1.32
MRPL28-201ENST00000199706 GAS2L2Q8NHY3 880 aa23.29■■□□□ 1.32
MRPL28-201ENST00000199706 LRRC4BQ9NT99 713 aa23.29■■□□□ 1.32
MRPL28-201ENST00000199706 PSDA5PKW4 1024 aaPredicted RBP23.28■■□□□ 1.32
MRPL28-201ENST00000199706 STK32BQ9NY57 414 aa23.28■■□□□ 1.32
MRPL28-201ENST00000199706 CICQ96RK0 1608 aaPredicted RBP23.27■■□□□ 1.32
MRPL28-201ENST00000199706 SLC15A2Q16348 729 aa23.27■■□□□ 1.32
MRPL28-201ENST00000199706 MTHFSDQ2M296 383 aaKnown RBP23.27■■□□□ 1.32
MRPL28-201ENST00000199706 U2AF1L5P0DN76 240 aaPredicted RBP23.26■■□□□ 1.31
MRPL28-201ENST00000199706 U2AF1Q01081 240 aaKnown RBP eCLIP23.26■■□□□ 1.31
MRPL28-201ENST00000199706 PRKRIP1Q9H875 184 aaPredicted RBP23.26■■□□□ 1.31
MRPL28-201ENST00000199706 CCNL1Q9UK58 526 aaPredicted RBP23.26■■□□□ 1.31
MRPL28-201ENST00000199706 PRKAR2BP31323 418 aa23.25■■□□□ 1.31
MRPL28-201ENST00000199706 MAP3K5Q99683 1374 aa23.25■■□□□ 1.31
MRPL28-201ENST00000199706 AKT1S1Q96B36 256 aa23.24■■□□□ 1.31
MRPL28-201ENST00000199706 CABP4P57796 275 aa23.23■■□□□ 1.31
MRPL28-201ENST00000199706 TUBGCP6Q96RT7 1819 aa23.22■■□□□ 1.31
MRPL28-201ENST00000199706 SIPA1L3O60292 1781 aaPredicted RBP23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms