RNA–Protein interactions for RNA: ENST00000043402.7

RTN4R-201, Transcript of reticulon 4 receptor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RTN4R, Length 2,157 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-201ENST00000043402 MIS18AQ9NYP9 233 aa32.95■■■□□ 2.87
RTN4R-201ENST00000043402 SLC4A3P48751 1232 aa32.94■■■□□ 2.86
RTN4R-201ENST00000043402 C1orf115Q9H7X2 142 aa32.94■■■□□ 2.86
RTN4R-201ENST00000043402 ESCO1Q5FWF5 840 aa32.93■■■□□ 2.86
RTN4R-201ENST00000043402 RTF1Q92541 710 aaKnown RBP32.93■■■□□ 2.86
RTN4R-201ENST00000043402 CHMP4BQ9H444 224 aaKnown RBP32.93■■■□□ 2.86
RTN4R-201ENST00000043402 GAS2L2Q8NHY3 880 aa32.92■■■□□ 2.86
RTN4R-201ENST00000043402 NUCB1Q02818 461 aa32.9■■■□□ 2.86
RTN4R-201ENST00000043402 HAP1P54257 671 aaPredicted RBP32.9■■■□□ 2.86
RTN4R-201ENST00000043402 LTV1Q96GA3 475 aaPredicted RBP32.9■■■□□ 2.86
RTN4R-201ENST00000043402 LTN1O94822 1766 aa32.89■■■□□ 2.86
RTN4R-201ENST00000043402 RGS12O14924 1447 aa32.89■■■□□ 2.86
RTN4R-201ENST00000043402 SIRT2Q8IXJ6 389 aa32.88■■■□□ 2.85
RTN4R-201ENST00000043402 PSME1Q06323 249 aa32.87■■■□□ 2.85
RTN4R-201ENST00000043402 TSPYL4Q9UJ04 414 aa32.87■■■□□ 2.85
RTN4R-201ENST00000043402 RTL1A6NKG5 1358 aa32.86■■■□□ 2.85
RTN4R-201ENST00000043402 NFAT5O94916 1531 aa32.86■■■□□ 2.85
RTN4R-201ENST00000043402 INTS3Q68E01 1043 aaKnown RBP32.85■■■□□ 2.85
RTN4R-201ENST00000043402 LNPKQ9C0E8 428 aa32.84■■■□□ 2.85
RTN4R-201ENST00000043402 HTATSF1O43719 755 aaKnown RBP32.83■■■□□ 2.85
RTN4R-201ENST00000043402 CHD1LQ86WJ1 897 aa32.83■■■□□ 2.85
RTN4R-201ENST00000043402 ORAI2Q96SN7 254 aa32.83■■■□□ 2.85
RTN4R-201ENST00000043402 LRRC37A3O60309 1634 aa32.83■■■□□ 2.85
RTN4R-201ENST00000043402 IP6K1Q92551 441 aa32.82■■■□□ 2.84
RTN4R-201ENST00000043402 GNAT3A8MTJ3 354 aa32.82■■■□□ 2.84
RTN4R-201ENST00000043402 USHBP1Q8N6Y0 703 aa32.81■■■□□ 2.84
RTN4R-201ENST00000043402 GCC1Q96CN9 775 aa32.81■■■□□ 2.84
RTN4R-201ENST00000043402 DAXXQ9UER7 740 aaPredicted RBP32.8■■■□□ 2.84
RTN4R-201ENST00000043402 SLC4A2P04920 1241 aa32.79■■■□□ 2.84
RTN4R-201ENST00000043402 PTPRCP08575 1304 aa32.79■■■□□ 2.84
RTN4R-201ENST00000043402 IL17REQ8NFR9 667 aa32.78■■■□□ 2.84
RTN4R-201ENST00000043402 MSH6P52701 1360 aa32.78■■■□□ 2.84
RTN4R-201ENST00000043402 TBC1D32Q96NH3 1257 aa32.77■■■□□ 2.84
RTN4R-201ENST00000043402 ANKRD45Q5TZF3 282 aa32.77■■■□□ 2.84
RTN4R-201ENST00000043402 MAP3K5Q99683 1374 aa32.77■■■□□ 2.84
RTN4R-201ENST00000043402 XPCQ01831 940 aaPredicted RBP32.76■■■□□ 2.83
RTN4R-201ENST00000043402 UPF2Q9HAU5 1272 aaKnown RBP32.75■■■□□ 2.83
RTN4R-201ENST00000043402 NBPF6Q5VWK0 638 aa32.75■■■□□ 2.83
RTN4R-201ENST00000043402 KCNH5Q8NCM2 988 aa32.75■■■□□ 2.83
RTN4R-201ENST00000043402 NBPF4Q96M43 638 aa32.75■■■□□ 2.83
RTN4R-201ENST00000043402 G2E3Q7L622 706 aa32.74■■■□□ 2.83
RTN4R-201ENST00000043402 PROSER2Q86WR7 435 aaPredicted RBP32.71■■■□□ 2.83
RTN4R-201ENST00000043402 PHRF1Q9P1Y6 1649 aaKnown RBP32.71■■■□□ 2.83
RTN4R-201ENST00000043402 ZBTB7CA1YPR0 619 aa32.7■■■□□ 2.83
RTN4R-201ENST00000043402 ATP10DQ9P241 1426 aa32.7■■■□□ 2.82
RTN4R-201ENST00000043402 RGPD2P0DJD1 1756 aa32.69■■■□□ 2.82
RTN4R-201ENST00000043402 GCP02774 474 aa32.68■■■□□ 2.82
RTN4R-201ENST00000043402 TAF7Q15545 349 aaPredicted RBP32.67■■■□□ 2.82
RTN4R-201ENST00000043402 RTL5Q5HYW3 569 aaPredicted RBP32.67■■■□□ 2.82
RTN4R-201ENST00000043402 MEIS3Q99687 375 aa32.66■■■□□ 2.82
RTN4R-201ENST00000043402 ANKRD44Q8N8A2 993 aa32.66■■■□□ 2.82
RTN4R-201ENST00000043402 F6X3S4 739 aa32.65■■■□□ 2.82
RTN4R-201ENST00000043402 ARHGEF25Q86VW2 580 aa32.65■■■□□ 2.82
RTN4R-201ENST00000043402 LRRC59Q96AG4 307 aaKnown RBP32.65■■■□□ 2.82
RTN4R-201ENST00000043402 DCTPP1Q9H773 170 aa32.65■■■□□ 2.82
RTN4R-201ENST00000043402 SLIT3O75094 1523 aa32.65■■■□□ 2.82
RTN4R-201ENST00000043402 PLEKHG5O94827 1062 aa32.65■■■□□ 2.82
RTN4R-201ENST00000043402 MFAP1P55081 439 aaKnown RBP32.65■■■□□ 2.82
RTN4R-201ENST00000043402 BMP2KLQ5H9B9 411 aa32.64■■■□□ 2.82
RTN4R-201ENST00000043402 TRPM3Q9HCF6 1732 aaPredicted RBP32.64■■■□□ 2.82
RTN4R-201ENST00000043402 CEP85Q6P2H3 762 aa32.63■■■□□ 2.81
RTN4R-201ENST00000043402 BABAM1Q9NWV8 329 aa32.63■■■□□ 2.81
RTN4R-201ENST00000043402 C1orf167Q5SNV9 1468 aa32.63■■■□□ 2.81
RTN4R-201ENST00000043402 FAM208AQ9UK61 1670 aaKnown RBP32.62■■■□□ 2.81
RTN4R-201ENST00000043402 CEMIPQ8WUJ3 1361 aa32.62■■■□□ 2.81
RTN4R-201ENST00000043402 DEKP35659 375 aaKnown RBP32.62■■■□□ 2.81
RTN4R-201ENST00000043402 LMOD2Q6P5Q4 547 aa32.62■■■□□ 2.81
RTN4R-201ENST00000043402 RPAP2Q8IXW5 612 aaPredicted RBP32.62■■■□□ 2.81
RTN4R-201ENST00000043402 STK31Q9BXU1 1019 aa32.62■■■□□ 2.81
RTN4R-201ENST00000043402 C19orf44Q9H6X5 657 aa32.62■■■□□ 2.81
RTN4R-201ENST00000043402 KRT28Q7Z3Y7 464 aa32.61■■■□□ 2.81
RTN4R-201ENST00000043402 CCDC30Q5VVM6 783 aa32.6■■■□□ 2.81
RTN4R-201ENST00000043402 SLC4A10Q6U841 1118 aa32.6■■■□□ 2.81
RTN4R-201ENST00000043402 C22orf23Q9BZE7 217 aa32.6■■■□□ 2.81
RTN4R-201ENST00000043402 NECTIN2Q92692 538 aa32.6■■■□□ 2.81
RTN4R-201ENST00000043402 BECN1Q14457 450 aa32.59■■■□□ 2.81
RTN4R-201ENST00000043402 LGR6Q9HBX8 967 aa32.59■■■□□ 2.81
RTN4R-201ENST00000043402 USP35Q9P2H5 1018 aa32.59■■■□□ 2.81
RTN4R-201ENST00000043402 FLIIQ13045 1269 aa32.58■■■□□ 2.81
RTN4R-201ENST00000043402 CCT4P50991 539 aaKnown RBP32.57■■■□□ 2.8
RTN4R-201ENST00000043402 SOS1Q07889 1333 aaPredicted RBP32.56■■■□□ 2.8
RTN4R-201ENST00000043402 DNAJC5Q9H3Z4 198 aa32.56■■■□□ 2.8
RTN4R-201ENST00000043402 MED1Q15648 1581 aaPredicted RBP32.56■■■□□ 2.8
RTN4R-201ENST00000043402 CACNA1FO60840 1977 aa32.55■■■□□ 2.8
RTN4R-201ENST00000043402 KIF1AQ12756 1690 aa32.55■■■□□ 2.8
RTN4R-201ENST00000043402 BCL11AQ9H165 835 aa32.54■■■□□ 2.8
RTN4R-201ENST00000043402 AXIN2Q9Y2T1 843 aa32.54■■■□□ 2.8
RTN4R-201ENST00000043402 NCAPD2Q15021 1401 aa32.53■■■□□ 2.8
RTN4R-201ENST00000043402 NFKBIBQ15653 356 aa32.53■■■□□ 2.8
RTN4R-201ENST00000043402 TBC1D2Q9BYX2 928 aa32.53■■■□□ 2.8
RTN4R-201ENST00000043402 FKBP5Q13451 457 aaPredicted RBP32.53■■■□□ 2.8
RTN4R-201ENST00000043402 ANKRD24Q8TF21 1146 aa32.53■■■□□ 2.8
RTN4R-201ENST00000043402 PLEKHM2Q8IWE5 1019 aa32.52■■■□□ 2.8
RTN4R-201ENST00000043402 LMO7Q8WWI1 1683 aa32.52■■■□□ 2.8
RTN4R-201ENST00000043402 STRCP1A6NGW2 1772 aa32.51■■■□□ 2.8
RTN4R-201ENST00000043402 ZNF530Q6P9A1 599 aaPredicted RBP32.51■■■□□ 2.79
RTN4R-201ENST00000043402 C16orf71Q8IYS4 520 aaPredicted RBP32.51■■■□□ 2.79
RTN4R-201ENST00000043402 AKAP4Q5JQC9 854 aa32.5■■■□□ 2.79
RTN4R-201ENST00000043402 TMEM94Q12767 1356 aa32.49■■■□□ 2.79
RTN4R-201ENST00000043402 PLEKHO1Q53GL0 409 aaPredicted RBP32.49■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms