RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 CLPBQ9H078 707 aa17.42■□□□□ 0.38
PHGDH-232ENST00000641947 FAM83DQ9H4H8 585 aa17.42■□□□□ 0.38
PHGDH-232ENST00000641947 NPHS2Q9NP85 383 aa17.42■□□□□ 0.38
PHGDH-232ENST00000641947 TRPV5Q9NQA5 729 aa17.42■□□□□ 0.38
PHGDH-232ENST00000641947 NFKBIL1Q9UBC1 381 aaPredicted RBP17.42■□□□□ 0.38
PHGDH-232ENST00000641947 IGLV3-16A0A075B6K0 115 aa17.41■□□□□ 0.38
PHGDH-232ENST00000641947 VPS26AO75436 327 aa17.41■□□□□ 0.38
PHGDH-232ENST00000641947 ITGB6P18564 788 aa17.41■□□□□ 0.38
PHGDH-232ENST00000641947 MLLT1Q03111 559 aaPredicted RBP17.41■□□□□ 0.38
PHGDH-232ENST00000641947 KHDC1Q4VXA5 237 aaKnown RBP17.41■□□□□ 0.38
PHGDH-232ENST00000641947 PIP5KL1Q5T9C9 394 aa17.41■□□□□ 0.38
PHGDH-232ENST00000641947 ZDHHC20Q5W0Z9 365 aa17.41■□□□□ 0.38
PHGDH-232ENST00000641947 ERN2Q76MJ5 926 aaKnown RBP17.41■□□□□ 0.38
PHGDH-232ENST00000641947 CCDC91Q7Z6B0 441 aa17.41■□□□□ 0.38
PHGDH-232ENST00000641947 SUGP1Q8IWZ8 645 aaKnown RBP17.41■□□□□ 0.38
PHGDH-232ENST00000641947 C10orf82Q8WW14 230 aa17.41■□□□□ 0.38
PHGDH-232ENST00000641947 PPP1R16AQ96I34 528 aa17.41■□□□□ 0.38
PHGDH-232ENST00000641947 CDX2Q99626 313 aaPredicted RBP17.41■□□□□ 0.38
PHGDH-232ENST00000641947 GATA5Q9BWX5 397 aaPredicted RBP17.41■□□□□ 0.38
PHGDH-232ENST00000641947 RSPH9Q9H1X1 276 aaPredicted RBP17.41■□□□□ 0.38
PHGDH-232ENST00000641947 ZDHHC3Q9NYG2 299 aa17.41■□□□□ 0.38
PHGDH-232ENST00000641947 PCDHB1Q9Y5F3 818 aa17.41■□□□□ 0.38
PHGDH-232ENST00000641947 COMMD10Q9Y6G5 202 aa17.41■□□□□ 0.38
PHGDH-232ENST00000641947 C1QTNF3-AMACRE9PGA6 284 aa17.4■□□□□ 0.38
PHGDH-232ENST00000641947 MID1O15344 667 aa17.4■□□□□ 0.38
PHGDH-232ENST00000641947 ADAM23O75077 832 aa17.4■□□□□ 0.38
PHGDH-232ENST00000641947 CHRM3P20309 590 aa17.4■□□□□ 0.38
PHGDH-232ENST00000641947 CCR10P46092 362 aa17.4■□□□□ 0.38
PHGDH-232ENST00000641947 SLC1A6P48664 564 aa17.4■□□□□ 0.38
PHGDH-232ENST00000641947 SATB1Q01826 763 aa17.4■□□□□ 0.38
PHGDH-232ENST00000641947 SKIV2LQ15477 1246 aaKnown RBP17.4■□□□□ 0.38
PHGDH-232ENST00000641947 TMEM196Q5HYL7 178 aa17.4■□□□□ 0.38
PHGDH-232ENST00000641947 GPRC6AQ5T6X5 926 aa17.4■□□□□ 0.38
PHGDH-232ENST00000641947 LYPLAL1Q5VWZ2 237 aa17.4■□□□□ 0.38
PHGDH-232ENST00000641947 NUDT18Q6ZVK8 323 aa17.4■□□□□ 0.38
PHGDH-232ENST00000641947 DSG4Q86SJ6 1040 aa17.4■□□□□ 0.38
PHGDH-232ENST00000641947 CPNE9Q8IYJ1 553 aa17.4■□□□□ 0.38
PHGDH-232ENST00000641947 PPP1R14CQ8TAE6 165 aa17.4■□□□□ 0.38
PHGDH-232ENST00000641947 GRAMD1AQ96CP6 724 aa17.4■□□□□ 0.38
PHGDH-232ENST00000641947 RMDN2Q96LZ7 410 aa17.4■□□□□ 0.38
PHGDH-232ENST00000641947 PHF7Q9BWX1 381 aaPredicted RBP17.4■□□□□ 0.38
PHGDH-232ENST00000641947 HDAC8Q9BY41 377 aa17.4■□□□□ 0.38
PHGDH-232ENST00000641947 SARS2Q9NP81 518 aaKnown RBP17.4■□□□□ 0.38
PHGDH-232ENST00000641947 SMOXQ9NWM0 555 aa17.4■□□□□ 0.38
PHGDH-232ENST00000641947 SERGEFQ9UGK8 458 aa17.4■□□□□ 0.38
PHGDH-232ENST00000641947 TRMT6Q9UJA5 497 aaKnown RBP17.4■□□□□ 0.38
PHGDH-232ENST00000641947 GNPTGQ9UJJ9 305 aa17.4■□□□□ 0.38
PHGDH-232ENST00000641947 TRIM13O60858 407 aa17.4■□□□□ 0.38
PHGDH-232ENST00000641947 MTX2O75431 263 aa17.4■□□□□ 0.38
PHGDH-232ENST00000641947 COL9A1P20849 921 aa17.4■□□□□ 0.38
PHGDH-232ENST00000641947 NFKBIAP25963 317 aa17.4■□□□□ 0.38
PHGDH-232ENST00000641947 COPAP53621 1224 aa17.4■□□□□ 0.38
PHGDH-232ENST00000641947 ITIH4Q14624 930 aa17.4■□□□□ 0.38
PHGDH-232ENST00000641947 ACOX1Q15067 660 aa17.4■□□□□ 0.38
PHGDH-232ENST00000641947 LIPMQ5VYY2 423 aa17.4■□□□□ 0.38
PHGDH-232ENST00000641947 PTRHD1Q6GMV3 140 aaKnown RBP17.4■□□□□ 0.38
PHGDH-232ENST00000641947 MACC1Q6ZN28 852 aa17.4■□□□□ 0.38
PHGDH-232ENST00000641947 RALGPS2Q86X27 583 aaPredicted RBP17.4■□□□□ 0.38
PHGDH-232ENST00000641947 TRAM1L1Q8N609 369 aa17.4■□□□□ 0.38
PHGDH-232ENST00000641947 IL17RCQ8NAC3 791 aa17.4■□□□□ 0.38
PHGDH-232ENST00000641947 DTD2Q96FN9 168 aa17.4■□□□□ 0.38
PHGDH-232ENST00000641947 DERL2Q9GZP9 239 aa17.4■□□□□ 0.38
PHGDH-232ENST00000641947 KCNK13Q9HB14 408 aa17.4■□□□□ 0.38
PHGDH-232ENST00000641947 THAP1Q9NVV9 213 aa17.4■□□□□ 0.38
PHGDH-232ENST00000641947 MID2Q9UJV3 735 aa17.4■□□□□ 0.38
PHGDH-232ENST00000641947 A8MT66 165 aa17.39■□□□□ 0.37
PHGDH-232ENST00000641947 E5RI56 91 aa17.39■□□□□ 0.37
PHGDH-232ENST00000641947 H0Y858 1186 aa17.39■□□□□ 0.37
PHGDH-232ENST00000641947 PSMD11O00231 422 aa17.39■□□□□ 0.37
PHGDH-232ENST00000641947 EBAG9O00559 213 aa17.39■□□□□ 0.37
PHGDH-232ENST00000641947 MMP20O60882 483 aa17.39■□□□□ 0.37
PHGDH-232ENST00000641947 SOD1P00441 154 aa17.39■□□□□ 0.37
PHGDH-232ENST00000641947 PYGLP06737 847 aa17.39■□□□□ 0.37
PHGDH-232ENST00000641947 C6P13671 934 aa17.39■□□□□ 0.37
PHGDH-232ENST00000641947 KPNA2P52292 529 aaKnown RBP17.39■□□□□ 0.37
PHGDH-232ENST00000641947 TAS2R38P59533 333 aa17.39■□□□□ 0.37
PHGDH-232ENST00000641947 ELP6Q0PNE2 266 aa17.39■□□□□ 0.37
PHGDH-232ENST00000641947 CST6Q15828 149 aa17.39■□□□□ 0.37
PHGDH-232ENST00000641947 ZNF648Q5T619 568 aaPredicted RBP17.39■□□□□ 0.37
PHGDH-232ENST00000641947 AGBL4Q5VU57 503 aa17.39■□□□□ 0.37
PHGDH-232ENST00000641947 KLC3Q6P597 504 aa17.39■□□□□ 0.37
PHGDH-232ENST00000641947 EEF1AKMT1Q8WVE0 214 aa17.39■□□□□ 0.37
PHGDH-232ENST00000641947 GUCD1Q96NT3 240 aa17.39■□□□□ 0.37
PHGDH-232ENST00000641947 ATOH8Q96SQ7 321 aa17.39■□□□□ 0.37
PHGDH-232ENST00000641947 COPS8Q99627 209 aa17.39■□□□□ 0.37
PHGDH-232ENST00000641947 GABRG3Q99928 467 aa17.39■□□□□ 0.37
PHGDH-232ENST00000641947 SLC6A17Q9H1V8 727 aa17.39■□□□□ 0.37
PHGDH-232ENST00000641947 DYRK4Q9NR20 520 aa17.39■□□□□ 0.37
PHGDH-232ENST00000641947 KLHL14Q9P2G3 628 aa17.39■□□□□ 0.37
PHGDH-232ENST00000641947 MARCOQ9UEW3 520 aaPredicted RBP17.39■□□□□ 0.37
PHGDH-232ENST00000641947 DCTN4Q9UJW0 460 aa17.39■□□□□ 0.37
PHGDH-232ENST00000641947 DHRS7Q9Y394 339 aa17.39■□□□□ 0.37
PHGDH-232ENST00000641947 FADS3Q9Y5Q0 445 aa17.39■□□□□ 0.37
PHGDH-232ENST00000641947 A0A1W2PQF6 199 aa17.38■□□□□ 0.37
PHGDH-232ENST00000641947 K7ESM1 405 aa17.38■□□□□ 0.37
PHGDH-232ENST00000641947 CDC7O00311 574 aa17.38■□□□□ 0.37
PHGDH-232ENST00000641947 RBP1P09455 135 aa17.38■□□□□ 0.37
PHGDH-232ENST00000641947 GRK2P25098 689 aa17.38■□□□□ 0.37
PHGDH-232ENST00000641947 PPARGP37231 505 aaPredicted RBP17.38■□□□□ 0.37
PHGDH-232ENST00000641947 NSG1P42857 185 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms