RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.42■□□□□ 0.221e-7■■□□□ 14.1
HNRNPU-228ENST00000640306 BIRC7Q96CA5 298 aa16.42■□□□□ 0.22
HNRNPU-228ENST00000640306 SLC39A13Q96H72 371 aa16.42■□□□□ 0.22
HNRNPU-228ENST00000640306 NANOGQ9H9S0 305 aa16.42■□□□□ 0.22
HNRNPU-228ENST00000640306 TMEM248Q9NWD8 314 aa16.42■□□□□ 0.22
HNRNPU-228ENST00000640306 IQCF5A8MTL0 148 aa16.41■□□□□ 0.22
HNRNPU-228ENST00000640306 M0QZQ0 153 aa16.41■□□□□ 0.22
HNRNPU-228ENST00000640306 SLC22A3O75751 556 aa16.41■□□□□ 0.22
HNRNPU-228ENST00000640306 LDLRP01130 860 aa16.41■□□□□ 0.22
HNRNPU-228ENST00000640306 POLR2IP36954 125 aaKnown RBP16.41■□□□□ 0.22
HNRNPU-228ENST00000640306 IST1P53990 364 aa16.41■□□□□ 0.22
HNRNPU-228ENST00000640306 SELPLGQ14242 412 aa16.41■□□□□ 0.22
HNRNPU-228ENST00000640306 MAPRE1Q15691 268 aaKnown RBP16.41■□□□□ 0.22
HNRNPU-228ENST00000640306 FAM43BQ6ZT52 329 aaPredicted RBP16.41■□□□□ 0.22
HNRNPU-228ENST00000640306 OR7D4Q8NG98 312 aa16.41■□□□□ 0.22
HNRNPU-228ENST00000640306 FNDC8Q8TC99 324 aa16.41■□□□□ 0.22
HNRNPU-228ENST00000640306 NSMCE3Q96MG7 304 aa16.41■□□□□ 0.22
HNRNPU-228ENST00000640306 ZBED2Q9BTP6 218 aa16.41■□□□□ 0.22
HNRNPU-228ENST00000640306 SNX2O60749 519 aa16.41■□□□□ 0.22
HNRNPU-228ENST00000640306 NDUFS3O75489 264 aa16.41■□□□□ 0.22
HNRNPU-228ENST00000640306 NR4A1P22736 598 aa16.41■□□□□ 0.22
HNRNPU-228ENST00000640306 HTR7P34969 479 aa16.41■□□□□ 0.22
HNRNPU-228ENST00000640306 CAPGP40121 348 aa16.41■□□□□ 0.22
HNRNPU-228ENST00000640306 SLC26A3P40879 764 aa16.41■□□□□ 0.22
HNRNPU-228ENST00000640306 RGRP47804 291 aa16.41■□□□□ 0.22
HNRNPU-228ENST00000640306 DGKQP52824 942 aa16.41■□□□□ 0.22
HNRNPU-228ENST00000640306 MON1AQ86VX9 555 aa16.41■□□□□ 0.22
HNRNPU-228ENST00000640306 IFNL1Q8IU54 200 aa16.41■□□□□ 0.22
HNRNPU-228ENST00000640306 ALDH16A1Q8IZ83 802 aa16.41■□□□□ 0.22
HNRNPU-228ENST00000640306 FUBP1Q96AE4 644 aaKnown RBP16.41■□□□□ 0.22
HNRNPU-228ENST00000640306 MUS81Q96NY9 551 aa16.41■□□□□ 0.22
HNRNPU-228ENST00000640306 MTG1Q9BT17 334 aaPredicted RBP16.41■□□□□ 0.22
HNRNPU-228ENST00000640306 NOD1Q9Y239 953 aa16.41■□□□□ 0.22
HNRNPU-228ENST00000640306 TCRBV5S2A0A599 114 aa16.4■□□□□ 0.22
HNRNPU-228ENST00000640306 SYNCRIPO60506 623 aaKnown RBP16.4■□□□□ 0.22
HNRNPU-228ENST00000640306 KERAO60938 352 aa16.4■□□□□ 0.22
HNRNPU-228ENST00000640306 MATN4O95460 622 aa16.4■□□□□ 0.22
HNRNPU-228ENST00000640306 ZFP36L2P47974 494 aaKnown RBP16.4■□□□□ 0.22
HNRNPU-228ENST00000640306 POLR2JP52435 117 aaKnown RBP16.4■□□□□ 0.22
HNRNPU-228ENST00000640306 MORN1Q5T089 497 aa16.4■□□□□ 0.22
HNRNPU-228ENST00000640306 SCML4Q8N228 414 aa16.4■□□□□ 0.22
HNRNPU-228ENST00000640306 LRRC43Q8N309 656 aa16.4■□□□□ 0.22
HNRNPU-228ENST00000640306 PACRGLQ8N7B6 248 aa16.4■□□□□ 0.22
HNRNPU-228ENST00000640306 EFHBQ8N7U6 833 aa16.4■□□□□ 0.22
HNRNPU-228ENST00000640306 C1orf74Q96LT6 269 aa16.4■□□□□ 0.22
HNRNPU-228ENST00000640306 SEZ6LQ9BYH1 1024 aa16.4■□□□□ 0.22
HNRNPU-228ENST00000640306 TFB2MQ9H5Q4 396 aaKnown RBP16.4■□□□□ 0.22
HNRNPU-228ENST00000640306 TAS2R13Q9NYV9 303 aa16.4■□□□□ 0.22
HNRNPU-228ENST00000640306 BOLA2-SMG1P6H3BVE0 249 aa16.4■□□□□ 0.22
HNRNPU-228ENST00000640306 TNPO2O14787 897 aaKnown RBP16.4■□□□□ 0.22
HNRNPU-228ENST00000640306 GPR182O15218 404 aa16.4■□□□□ 0.22
HNRNPU-228ENST00000640306 KATNA1O75449 491 aa16.4■□□□□ 0.22
HNRNPU-228ENST00000640306 ZNF182P17025 639 aaPredicted RBP16.4■□□□□ 0.22
HNRNPU-228ENST00000640306 HRH2P25021 359 aa16.4■□□□□ 0.22
HNRNPU-228ENST00000640306 SERINC3Q13530 473 aa16.4■□□□□ 0.22
HNRNPU-228ENST00000640306 RCAN2Q14206 197 aa16.4■□□□□ 0.22
HNRNPU-228ENST00000640306 BEND5Q7L4P6 421 aa16.4■□□□□ 0.22
HNRNPU-228ENST00000640306 SPRED1Q7Z699 444 aa16.4■□□□□ 0.22
HNRNPU-228ENST00000640306 BRSK1Q8TDC3 778 aa16.4■□□□□ 0.22
HNRNPU-228ENST00000640306 KIAA1191Q96A73 305 aa16.4■□□□□ 0.22
HNRNPU-228ENST00000640306 BIRC8Q96P09 236 aa16.4■□□□□ 0.22
HNRNPU-228ENST00000640306 AIG1Q9NVV5 245 aa16.4■□□□□ 0.22
HNRNPU-228ENST00000640306 CD274Q9NZQ7 290 aa16.4■□□□□ 0.22
HNRNPU-228ENST00000640306 MARCH2Q9P0N8 246 aa16.4■□□□□ 0.22
HNRNPU-228ENST00000640306 SUN2Q9UH99 717 aa16.4■□□□□ 0.22
HNRNPU-228ENST00000640306 TANC1Q9C0D5 1861 aa16.4■□□□□ 0.22
HNRNPU-228ENST00000640306 WASH4PA8MWX3 477 aa16.39■□□□□ 0.21
HNRNPU-228ENST00000640306 J3QRK9 145 aa16.39■□□□□ 0.21
HNRNPU-228ENST00000640306 GPIP06744 558 aa16.39■□□□□ 0.21
HNRNPU-228ENST00000640306 HTR6P50406 440 aa16.39■□□□□ 0.21
HNRNPU-228ENST00000640306 NAA20P61599 178 aa16.39■□□□□ 0.21
HNRNPU-228ENST00000640306 RAD51Q06609 339 aa16.39■□□□□ 0.21
HNRNPU-228ENST00000640306 CRHR2Q13324 411 aa16.39■□□□□ 0.21
HNRNPU-228ENST00000640306 ITIH5Q86UX2 942 aa16.39■□□□□ 0.21
HNRNPU-228ENST00000640306 PIANPQ8IYJ0 282 aa16.39■□□□□ 0.21
HNRNPU-228ENST00000640306 GIPC3Q8TF64 312 aa16.39■□□□□ 0.21
HNRNPU-228ENST00000640306 EEF1AKMT1Q8WVE0 214 aa16.39■□□□□ 0.21
HNRNPU-228ENST00000640306 FBXL8Q96CD0 374 aa16.39■□□□□ 0.21
HNRNPU-228ENST00000640306 ASB2Q96Q27 587 aa16.39■□□□□ 0.21
HNRNPU-228ENST00000640306 TRIM54Q9BYV2 358 aa16.39■□□□□ 0.21
HNRNPU-228ENST00000640306 ADNPQ9H2P0 1102 aa16.39■□□□□ 0.21
HNRNPU-228ENST00000640306 HIPK3Q9H422 1215 aa16.39■□□□□ 0.21
HNRNPU-228ENST00000640306 PLGRKTQ9HBL7 147 aa16.39■□□□□ 0.21
HNRNPU-228ENST00000640306 IFT80Q9P2H3 777 aaPredicted RBP16.39■□□□□ 0.21
HNRNPU-228ENST00000640306 CIDEBQ9UHD4 219 aa16.39■□□□□ 0.21
HNRNPU-228ENST00000640306 DOLKQ9UPQ8 538 aa16.39■□□□□ 0.21
HNRNPU-228ENST00000640306 MANSC4A6NHS7 340 aaPredicted RBP16.39■□□□□ 0.21
HNRNPU-228ENST00000640306 TCF3P15923 654 aa16.39■□□□□ 0.21
HNRNPU-228ENST00000640306 NFKBIAP25963 317 aa16.39■□□□□ 0.21
HNRNPU-228ENST00000640306 CTGFP29279 349 aa16.39■□□□□ 0.21
HNRNPU-228ENST00000640306 GGT5P36269 586 aa16.39■□□□□ 0.21
HNRNPU-228ENST00000640306 OR1G1P47890 313 aa16.39■□□□□ 0.21
HNRNPU-228ENST00000640306 TRAF2Q12933 501 aa16.39■□□□□ 0.21
HNRNPU-228ENST00000640306 ANKRD34AQ69YU3 496 aa16.39■□□□□ 0.21
HNRNPU-228ENST00000640306 GLYATQ6IB77 296 aa16.39■□□□□ 0.21
HNRNPU-228ENST00000640306 OGFOD2Q6N063 350 aa16.39■□□□□ 0.21
HNRNPU-228ENST00000640306 PSAPL1Q6NUJ1 521 aa16.39■□□□□ 0.21
HNRNPU-228ENST00000640306 DNAJC14Q6Y2X3 702 aaPredicted RBP16.39■□□□□ 0.21
HNRNPU-228ENST00000640306 GLT6D1Q7Z4J2 308 aa16.39■□□□□ 0.21
HNRNPU-228ENST00000640306 PATL1Q86TB9 770 aaKnown RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms