RNA–Protein interactions for RNA: ENST00000640219.1

HLA-C-210, Transcript of major histocompatibility complex, class I, C, humanhuman

BASIC

Gene HLA-C, Length 976 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-210ENST00000640219 TIMP2P16035 220 aa13.67□□□□□ -0.22
HLA-C-210ENST00000640219 TSPAN7P41732 249 aa13.67□□□□□ -0.22
HLA-C-210ENST00000640219 KRT81Q14533 505 aa13.67□□□□□ -0.22
HLA-C-210ENST00000640219 EIF2S3LQ2VIR3 472 aaKnown RBP13.67□□□□□ -0.22
HLA-C-210ENST00000640219 PARP15Q460N3 678 aa13.67□□□□□ -0.22
HLA-C-210ENST00000640219 AFMIDQ63HM1 303 aa13.67□□□□□ -0.22
HLA-C-210ENST00000640219 ZNF438Q7Z4V0 828 aa13.67□□□□□ -0.22
HLA-C-210ENST00000640219 DAAM2Q86T65 1068 aa13.67□□□□□ -0.22
HLA-C-210ENST00000640219 KLHL7Q8IXQ5 586 aa13.67□□□□□ -0.22
HLA-C-210ENST00000640219 TSEN2Q8NCE0 465 aaKnown RBP13.67□□□□□ -0.22
HLA-C-210ENST00000640219 OR4D9Q8NGE8 314 aa13.67□□□□□ -0.22
HLA-C-210ENST00000640219 TEFMQ96QE5 360 aaKnown RBP13.67□□□□□ -0.22
HLA-C-210ENST00000640219 SH3GL2Q99962 352 aa13.67□□□□□ -0.22
HLA-C-210ENST00000640219 SPRY4Q9C004 299 aa13.67□□□□□ -0.22
HLA-C-210ENST00000640219 TMEM168Q9H0V1 697 aa13.67□□□□□ -0.22
HLA-C-210ENST00000640219 SMARCAL1Q9NZC9 954 aa13.67□□□□□ -0.22
HLA-C-210ENST00000640219 OTOGQ6ZRI0 2925 aa13.66□□□□□ -0.22
HLA-C-210ENST00000640219 GOLGA6L10A0A0M3HER8 536 aa13.66□□□□□ -0.22
HLA-C-210ENST00000640219 WIPF3A6NGB9 483 aa13.66□□□□□ -0.22
HLA-C-210ENST00000640219 H3BRJ5 948 aa13.66□□□□□ -0.22
HLA-C-210ENST00000640219 MFSD11O43934 449 aa13.66□□□□□ -0.22
HLA-C-210ENST00000640219 PROSCO94903 275 aa13.66□□□□□ -0.22
HLA-C-210ENST00000640219 GSRP00390 522 aa13.66□□□□□ -0.22
HLA-C-210ENST00000640219 IL4RP24394 825 aa13.66□□□□□ -0.22
HLA-C-210ENST00000640219 MPSTP25325 297 aa13.66□□□□□ -0.22
HLA-C-210ENST00000640219 ARSEP51690 589 aa13.66□□□□□ -0.22
HLA-C-210ENST00000640219 YBEYP58557 167 aaPredicted RBP13.66□□□□□ -0.22
HLA-C-210ENST00000640219 SNRPD1P62314 119 aaKnown RBP13.66□□□□□ -0.22
HLA-C-210ENST00000640219 DPYSL3Q14195 570 aa13.66□□□□□ -0.22
HLA-C-210ENST00000640219 LLGL1Q15334 1064 aa13.66□□□□□ -0.22
HLA-C-210ENST00000640219 MYLK3Q32MK0 819 aa13.66□□□□□ -0.22
HLA-C-210ENST00000640219 GDPD4Q6W3E5 623 aa13.66□□□□□ -0.22
HLA-C-210ENST00000640219 TIPARPQ7Z3E1 657 aaKnown RBP13.66□□□□□ -0.22
HLA-C-210ENST00000640219 ZSWIM9Q86XI8 627 aa13.66□□□□□ -0.22
HLA-C-210ENST00000640219 RHOT2Q8IXI1 618 aa13.66□□□□□ -0.22
HLA-C-210ENST00000640219 LRRC57Q8N9N7 239 aa13.66□□□□□ -0.22
HLA-C-210ENST00000640219 OR56A4Q8NGH8 313 aa13.66□□□□□ -0.22
HLA-C-210ENST00000640219 CCL4L1Q8NHW4 92 aa13.66□□□□□ -0.22
HLA-C-210ENST00000640219 SLC35G2Q8TBE7 412 aa13.66□□□□□ -0.22
HLA-C-210ENST00000640219 RTP4Q96DX8 246 aa13.66□□□□□ -0.22
HLA-C-210ENST00000640219 MOCOSQ96EN8 888 aa13.66□□□□□ -0.22
HLA-C-210ENST00000640219 SP110Q9HB58 689 aa13.66□□□□□ -0.22
HLA-C-210ENST00000640219 MRPL40Q9NQ50 206 aaKnown RBP13.66□□□□□ -0.22
HLA-C-210ENST00000640219 FAM114A2Q9NRY5 505 aa13.66□□□□□ -0.22
HLA-C-210ENST00000640219 DONSONQ9NYP3 566 aa13.66□□□□□ -0.22
HLA-C-210ENST00000640219 NFU1Q9UMS0 254 aa13.66□□□□□ -0.22
HLA-C-210ENST00000640219 MAP4K5Q9Y4K4 846 aa13.66□□□□□ -0.22
HLA-C-210ENST00000640219 PCDHB3Q9Y5E6 796 aa13.66□□□□□ -0.22
HLA-C-210ENST00000640219 ESPL1Q14674 2120 aa13.66□□□□□ -0.22
HLA-C-210ENST00000640219 TMEM202A6NGA9 273 aa13.65□□□□□ -0.22
HLA-C-210ENST00000640219 ARHGAP42A6NI28 874 aa13.65□□□□□ -0.22
HLA-C-210ENST00000640219 AGPSO00116 658 aa13.65□□□□□ -0.22
HLA-C-210ENST00000640219 BUB1BO60566 1050 aaPredicted RBP13.65□□□□□ -0.22
HLA-C-210ENST00000640219 RFPL1O75677 317 aa13.65□□□□□ -0.22
HLA-C-210ENST00000640219 IGSF6O95976 241 aa13.65□□□□□ -0.22
HLA-C-210ENST00000640219 PCCBP05166 539 aa13.65□□□□□ -0.22
HLA-C-210ENST00000640219 THRAP10827 490 aa13.65□□□□□ -0.22
HLA-C-210ENST00000640219 ARL4AP40617 200 aa13.65□□□□□ -0.22
HLA-C-210ENST00000640219 GPR3P46089 330 aa13.65□□□□□ -0.22
HLA-C-210ENST00000640219 NDST2P52849 883 aa13.65□□□□□ -0.22
HLA-C-210ENST00000640219 SLC10A7Q0GE19 358 aa13.65□□□□□ -0.22
HLA-C-210ENST00000640219 BIRC2Q13490 618 aa13.65□□□□□ -0.22
HLA-C-210ENST00000640219 NR1D2Q14995 579 aa13.65□□□□□ -0.22
HLA-C-210ENST00000640219 TMEM52BQ4KMG9 183 aa13.65□□□□□ -0.22
HLA-C-210ENST00000640219 NKAIN2Q5VXU1 208 aa13.65□□□□□ -0.22
HLA-C-210ENST00000640219 LRIG3Q6UXM1 1119 aa13.65□□□□□ -0.22
HLA-C-210ENST00000640219 B4GALNT4Q76KP1 1039 aa13.65□□□□□ -0.22
HLA-C-210ENST00000640219 CAMK1DQ8IU85 385 aa13.65□□□□□ -0.22
HLA-C-210ENST00000640219 RASGEF1CQ8N431 466 aa13.65□□□□□ -0.22
HLA-C-210ENST00000640219 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.65□□□□□ -0.22
HLA-C-210ENST00000640219 CASKIN2Q8WXE0 1202 aa13.65□□□□□ -0.22
HLA-C-210ENST00000640219 RAPGEF5Q92565 580 aa13.65□□□□□ -0.22
HLA-C-210ENST00000640219 CTRCQ99895 268 aa13.65□□□□□ -0.22
HLA-C-210ENST00000640219 CAPS2Q9BXY5 557 aa13.65□□□□□ -0.22
HLA-C-210ENST00000640219 TRIT1Q9H3H1 467 aaKnown RBP13.65□□□□□ -0.22
HLA-C-210ENST00000640219 FGF22Q9HCT0 170 aa13.65□□□□□ -0.22
HLA-C-210ENST00000640219 SPATS2LQ9NUQ6 558 aaKnown RBP13.65□□□□□ -0.22
HLA-C-210ENST00000640219 TLK1Q9UKI8 766 aa13.65□□□□□ -0.22
HLA-C-210ENST00000640219 TTC7AQ9ULT0 858 aaPredicted RBP13.65□□□□□ -0.22
HLA-C-210ENST00000640219 PACSIN2Q9UNF0 486 aaPredicted RBP13.65□□□□□ -0.22
HLA-C-210ENST00000640219 MRPS18BQ9Y676 258 aaKnown RBP13.65□□□□□ -0.22
HLA-C-210ENST00000640219 CSMD1Q96PZ7 3565 aa13.65□□□□□ -0.22
HLA-C-210ENST00000640219 RAD51CO43502 376 aa13.64□□□□□ -0.23
HLA-C-210ENST00000640219 PDGFAP04085 211 aa13.64□□□□□ -0.23
HLA-C-210ENST00000640219 XPAP23025 273 aaPredicted RBP13.64□□□□□ -0.23
HLA-C-210ENST00000640219 CARSP49589 748 aaKnown RBP13.64□□□□□ -0.23
HLA-C-210ENST00000640219 MAXP61244 160 aa13.64□□□□□ -0.23
HLA-C-210ENST00000640219 MTM1Q13496 603 aa13.64□□□□□ -0.23
HLA-C-210ENST00000640219 PTPRRQ15256 657 aa13.64□□□□□ -0.23
HLA-C-210ENST00000640219 BOLA3Q53S33 107 aa13.64□□□□□ -0.23
HLA-C-210ENST00000640219 ZFYVE27Q5T4F4 411 aa13.64□□□□□ -0.23
HLA-C-210ENST00000640219 NCBP2-AS2Q69YL0 99 aa13.64□□□□□ -0.23
HLA-C-210ENST00000640219 CEACAM20Q6UY09 585 aa13.64□□□□□ -0.23
HLA-C-210ENST00000640219 NT5DC3Q86UY8 548 aa13.64□□□□□ -0.23
HLA-C-210ENST00000640219 C17orf82Q86X59 251 aaPredicted RBP13.64□□□□□ -0.23
HLA-C-210ENST00000640219 PGBD5Q8N414 524 aa13.64□□□□□ -0.23
HLA-C-210ENST00000640219 ARFGAP2Q8N6H7 521 aa13.64□□□□□ -0.23
HLA-C-210ENST00000640219 UBL4BQ8N7F7 174 aa13.64□□□□□ -0.23
HLA-C-210ENST00000640219 BMPERQ8N8U9 685 aa13.64□□□□□ -0.23
HLA-C-210ENST00000640219 PRR7Q8TB68 274 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms