RNA–Protein interactions for RNA: ENST00000640135.1

SCN1B-208, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 4,846 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-208ENST00000640135 EPHX4Q8IUS5 362 aa10.95□□□□□ -0.66
SCN1B-208ENST00000640135 PYROXD2Q8N2H3 581 aa10.95□□□□□ -0.66
SCN1B-208ENST00000640135 DHRSXQ8N5I4 330 aa10.95□□□□□ -0.66
SCN1B-208ENST00000640135 SIX2Q9NPC8 291 aa10.95□□□□□ -0.66
SCN1B-208ENST00000640135 COG5Q9UP83 839 aa10.95□□□□□ -0.66
SCN1B-208ENST00000640135 NPEPPSL1A6NEC2 478 aa10.94□□□□□ -0.66
SCN1B-208ENST00000640135 CLOCKO15516 846 aa10.94□□□□□ -0.66
SCN1B-208ENST00000640135 UBXN7O94888 489 aa10.94□□□□□ -0.66
SCN1B-208ENST00000640135 GOT2P00505 430 aaKnown RBP10.94□□□□□ -0.66
SCN1B-208ENST00000640135 TNFP01375 233 aa10.94□□□□□ -0.66
SCN1B-208ENST00000640135 TRBC1P01850 177 aa10.94□□□□□ -0.66
SCN1B-208ENST00000640135 CHRNA1P02708 482 aa10.94□□□□□ -0.66
SCN1B-208ENST00000640135 PROCP04070 461 aa10.94□□□□□ -0.66
SCN1B-208ENST00000640135 CCNYL3P0C7X3 344 aa10.94□□□□□ -0.66
SCN1B-208ENST00000640135 CSF2RAP15509 400 aa10.94□□□□□ -0.66
SCN1B-208ENST00000640135 TIE1P35590 1138 aa10.94□□□□□ -0.66
SCN1B-208ENST00000640135 RPP38P78345 283 aaKnown RBP10.94□□□□□ -0.66
SCN1B-208ENST00000640135 LGALS3BPQ08380 585 aa10.94□□□□□ -0.66
SCN1B-208ENST00000640135 TAF5Q15542 800 aa10.94□□□□□ -0.66
SCN1B-208ENST00000640135 TMEM154Q6P9G4 183 aa10.94□□□□□ -0.66
SCN1B-208ENST00000640135 CIR1Q86X95 450 aaPredicted RBP10.94□□□□□ -0.66
SCN1B-208ENST00000640135 CAMK1DQ8IU85 385 aa10.94□□□□□ -0.66
SCN1B-208ENST00000640135 TSEN2Q8NCE0 465 aaKnown RBP10.94□□□□□ -0.66
SCN1B-208ENST00000640135 OR6Y1Q8NGX8 325 aa10.94□□□□□ -0.66
SCN1B-208ENST00000640135 LRIG1Q96JA1 1093 aa10.94□□□□□ -0.66
SCN1B-208ENST00000640135 S100A13Q99584 98 aa10.94□□□□□ -0.66
SCN1B-208ENST00000640135 HOPXQ9BPY8 73 aaPredicted RBP10.94□□□□□ -0.66
SCN1B-208ENST00000640135 YIPF3Q9GZM5 350 aa10.94□□□□□ -0.66
SCN1B-208ENST00000640135 WDR6Q9NNW5 1121 aaKnown RBP10.94□□□□□ -0.66
SCN1B-208ENST00000640135 CALML5Q9NZT1 146 aa10.94□□□□□ -0.66
SCN1B-208ENST00000640135 PIM1P11309 404 aaPredicted RBP10.94□□□□□ -0.66
SCN1B-208ENST00000640135 PRPS2P11908 318 aa10.94□□□□□ -0.66
SCN1B-208ENST00000640135 ITPKAP23677 461 aa10.94□□□□□ -0.66
SCN1B-208ENST00000640135 KIR3DL1P43629 444 aa10.94□□□□□ -0.66
SCN1B-208ENST00000640135 DHPSP49366 369 aaPredicted RBP10.94□□□□□ -0.66
SCN1B-208ENST00000640135 PSME3P61289 254 aa10.94□□□□□ -0.66
SCN1B-208ENST00000640135 RING1Q06587 406 aa10.94□□□□□ -0.66
SCN1B-208ENST00000640135 LCP2Q13094 533 aa10.94□□□□□ -0.66
SCN1B-208ENST00000640135 HEPACAMQ14CZ8 416 aa10.94□□□□□ -0.66
SCN1B-208ENST00000640135 PLA2G4EQ3MJ16 856 aa10.94□□□□□ -0.66
SCN1B-208ENST00000640135 RNF43Q68DV7 783 aa10.94□□□□□ -0.66
SCN1B-208ENST00000640135 GALNT18Q6P9A2 607 aa10.94□□□□□ -0.66
SCN1B-208ENST00000640135 CHST15Q7LFX5 561 aaPredicted RBP10.94□□□□□ -0.66
SCN1B-208ENST00000640135 KBTBD6Q86V97 674 aa10.94□□□□□ -0.66
SCN1B-208ENST00000640135 GJD3Q8N144 294 aa10.94□□□□□ -0.66
SCN1B-208ENST00000640135 DEPDC4Q8N2C3 294 aa10.94□□□□□ -0.66
SCN1B-208ENST00000640135 POU5F2Q8N7G0 328 aa10.94□□□□□ -0.66
SCN1B-208ENST00000640135 SPATA22Q8NHS9 363 aa10.94□□□□□ -0.66
SCN1B-208ENST00000640135 WDR36Q8NI36 951 aaKnown RBP10.94□□□□□ -0.66
SCN1B-208ENST00000640135 ZSCAN18Q8TBC5 510 aaPredicted RBP10.94□□□□□ -0.66
SCN1B-208ENST00000640135 CCDC28BQ9BUN5 200 aa10.94□□□□□ -0.66
SCN1B-208ENST00000640135 RACGAP1Q9H0H5 632 aa10.94□□□□□ -0.66
SCN1B-208ENST00000640135 DDX18Q9NVP1 670 aaKnown RBP10.94□□□□□ -0.66
SCN1B-208ENST00000640135 ZDHHC3Q9NYG2 299 aa10.94□□□□□ -0.66
SCN1B-208ENST00000640135 FKBPLQ9UIM3 349 aa10.94□□□□□ -0.66
SCN1B-208ENST00000640135 ZNF490Q9ULM2 529 aaPredicted RBP10.94□□□□□ -0.66
SCN1B-208ENST00000640135 R3HDM2Q9Y2K5 976 aaKnown RBP10.94□□□□□ -0.66
SCN1B-208ENST00000640135 FAM20BO75063 409 aa10.94□□□□□ -0.66
SCN1B-208ENST00000640135 CFIP05156 583 aa10.94□□□□□ -0.66
SCN1B-208ENST00000640135 HOXB2P14652 356 aa10.94□□□□□ -0.66
SCN1B-208ENST00000640135 VIPR1P32241 457 aa10.94□□□□□ -0.66
SCN1B-208ENST00000640135 ACTR1BP42025 376 aa10.94□□□□□ -0.66
SCN1B-208ENST00000640135 TAS2R50P59544 299 aa10.94□□□□□ -0.66
SCN1B-208ENST00000640135 ACTR1AP61163 376 aa10.94□□□□□ -0.66
SCN1B-208ENST00000640135 TIMM50Q3ZCQ8 353 aa10.94□□□□□ -0.66
SCN1B-208ENST00000640135 OTUD3Q5T2D3 398 aaPredicted RBP10.94□□□□□ -0.66
SCN1B-208ENST00000640135 ATXN7L2Q5T6C5 722 aaPredicted RBP10.94□□□□□ -0.66
SCN1B-208ENST00000640135 METTL21CQ5VZV1 264 aa10.94□□□□□ -0.66
SCN1B-208ENST00000640135 MFSD5Q6N075 450 aa10.94□□□□□ -0.66
SCN1B-208ENST00000640135 CCSER2Q9H7U1 834 aa10.94□□□□□ -0.66
SCN1B-208ENST00000640135 NPC1O15118 1278 aa10.93□□□□□ -0.66
SCN1B-208ENST00000640135 COX4I1P13073 169 aa10.93□□□□□ -0.66
SCN1B-208ENST00000640135 PFKLP17858 780 aa10.93□□□□□ -0.66
SCN1B-208ENST00000640135 MTAPQ13126 283 aa10.93□□□□□ -0.66
SCN1B-208ENST00000640135 RFX4Q33E94 735 aa10.93□□□□□ -0.66
SCN1B-208ENST00000640135 FBXW10Q5XX13 1052 aa10.93□□□□□ -0.66
SCN1B-208ENST00000640135 C11orf88Q6PI97 169 aa10.93□□□□□ -0.66
SCN1B-208ENST00000640135 GCNT7Q6ZNI0 430 aa10.93□□□□□ -0.66
SCN1B-208ENST00000640135 CMC1Q7Z7K0 106 aa10.93□□□□□ -0.66
SCN1B-208ENST00000640135 NATD1Q8N6N6 113 aa10.93□□□□□ -0.66
SCN1B-208ENST00000640135 PPP1R14AQ96A00 147 aa10.93□□□□□ -0.66
SCN1B-208ENST00000640135 RNFT2Q96EX2 444 aa10.93□□□□□ -0.66
SCN1B-208ENST00000640135 RBM18Q96H35 190 aaKnown RBP10.93□□□□□ -0.66
SCN1B-208ENST00000640135 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.93□□□□□ -0.66
SCN1B-208ENST00000640135 SSU72Q9NP77 194 aaKnown RBP10.93□□□□□ -0.66
SCN1B-208ENST00000640135 FETUBQ9UGM5 382 aa10.93□□□□□ -0.66
SCN1B-208ENST00000640135 PLLPQ9Y342 182 aa10.93□□□□□ -0.66
SCN1B-208ENST00000640135 TRIM38O00635 465 aa10.93□□□□□ -0.66
SCN1B-208ENST00000640135 MYL12BO14950 172 aa10.93□□□□□ -0.66
SCN1B-208ENST00000640135 SNX3O60493 162 aa10.93□□□□□ -0.66
SCN1B-208ENST00000640135 LATS1O95835 1130 aa10.93□□□□□ -0.66
SCN1B-208ENST00000640135 TOP3AQ13472 1001 aaPredicted RBP10.93□□□□□ -0.66
SCN1B-208ENST00000640135 SERINC3Q13530 473 aa10.93□□□□□ -0.66
SCN1B-208ENST00000640135 EIF4HQ15056 248 aaKnown RBP10.93□□□□□ -0.66
SCN1B-208ENST00000640135 TEAD2Q15562 447 aa10.93□□□□□ -0.66
SCN1B-208ENST00000640135 SLC1A5Q15758 541 aa10.93□□□□□ -0.66
SCN1B-208ENST00000640135 MORN1Q5T089 497 aa10.93□□□□□ -0.66
SCN1B-208ENST00000640135 SYPL2Q5VXT5 272 aa10.93□□□□□ -0.66
SCN1B-208ENST00000640135 COMMD2Q86X83 199 aa10.93□□□□□ -0.66
SCN1B-208ENST00000640135 PROSER1Q86XN7 944 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms