RNA–Protein interactions for RNA: ENST00000640125.1

PAX6-264, Transcript of paired box 6, human

TSL 5 BASIC

Gene PAX6, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAX6-264	ENST00000640125	HEXDC	Q8WVB3	486 aa		13.81	□□□□□ -0.2
PAX6-264	ENST00000640125	DCUN1D1	Q96GG9	259 aa		13.81	□□□□□ -0.2
PAX6-264	ENST00000640125	C9orf72	Q96LT7	481 aa		13.81	□□□□□ -0.2
PAX6-264	ENST00000640125	TTC25	Q96NG3	672 aa		13.81	□□□□□ -0.2
PAX6-264	ENST00000640125	ELF4	Q99607	663 aa	Predicted RBP	13.81	□□□□□ -0.2
PAX6-264	ENST00000640125	GTPBP2	Q9BX10	602 aa	Known RBP	13.81	□□□□□ -0.2
PAX6-264	ENST00000640125	OR2AG1	Q9H205	316 aa		13.81	□□□□□ -0.2
PAX6-264	ENST00000640125	ARFGAP3	Q9NP61	516 aa		13.81	□□□□□ -0.2
PAX6-264	ENST00000640125	DNAJC28	Q9NX36	388 aa		13.81	□□□□□ -0.2
PAX6-264	ENST00000640125	ZDHHC3	Q9NYG2	299 aa		13.81	□□□□□ -0.2
PAX6-264	ENST00000640125	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	13.81	□□□□□ -0.2
PAX6-264	ENST00000640125	MOSPD1	Q9UJG1	213 aa		13.81	□□□□□ -0.2
PAX6-264	ENST00000640125	DGKB	Q9Y6T7	804 aa		13.81	□□□□□ -0.2
PAX6-264	ENST00000640125		V9GYY5	206 aa	Predicted RBP	13.81	□□□□□ -0.2
PAX6-264	ENST00000640125	CACNA1E	Q15878	2313 aa		13.8	□□□□□ -0.2
PAX6-264	ENST00000640125	LNP1	A1A4G5	178 aa		13.8	□□□□□ -0.2
PAX6-264	ENST00000640125	PRSS38	A1L453	326 aa		13.8	□□□□□ -0.2
PAX6-264	ENST00000640125	CFAP99	D6REC4	459 aa		13.8	□□□□□ -0.2
PAX6-264	ENST00000640125	CDK14	O94921	469 aa		13.8	□□□□□ -0.2
PAX6-264	ENST00000640125	RASGRP1	O95267	797 aa		13.8	□□□□□ -0.2
PAX6-264	ENST00000640125	CER1	O95813	267 aa		13.8	□□□□□ -0.2
PAX6-264	ENST00000640125	CSF2	P04141	144 aa		13.8	□□□□□ -0.2
PAX6-264	ENST00000640125	IVL	P07476	585 aa		13.8	□□□□□ -0.2
PAX6-264	ENST00000640125	NME1	P15531	152 aa	Known RBP	13.8	□□□□□ -0.2
PAX6-264	ENST00000640125	MSH3	P20585	1137 aa		13.8	□□□□□ -0.2
PAX6-264	ENST00000640125	PML	P29590	882 aa		13.8	□□□□□ -0.2
PAX6-264	ENST00000640125	POLD2	P49005	469 aa		13.8	□□□□□ -0.2
PAX6-264	ENST00000640125	TTPA	P49638	278 aa		13.8	□□□□□ -0.2
PAX6-264	ENST00000640125	HK3	P52790	923 aa		13.8	□□□□□ -0.2
PAX6-264	ENST00000640125	TMEM115	Q12893	351 aa	Predicted RBP	13.8	□□□□□ -0.2
PAX6-264	ENST00000640125	GTF2H3	Q13889	308 aa		13.8	□□□□□ -0.2
PAX6-264	ENST00000640125	ITIH4	Q14624	930 aa		13.8	□□□□□ -0.2
PAX6-264	ENST00000640125	SLMAP	Q14BN4	828 aa		13.8	□□□□□ -0.2
PAX6-264	ENST00000640125	SF3A2	Q15428	464 aa	Known RBP	13.8	□□□□□ -0.2
PAX6-264	ENST00000640125	SMAD1	Q15797	465 aa	Known RBP	13.8	□□□□□ -0.2
PAX6-264	ENST00000640125	DBN1	Q16643	649 aa		13.8	□□□□□ -0.2
PAX6-264	ENST00000640125	ZNF423	Q2M1K9	1284 aa		13.8	□□□□□ -0.2
PAX6-264	ENST00000640125	ERCC6L	Q2NKX8	1250 aa		13.8	□□□□□ -0.2
PAX6-264	ENST00000640125	KHDC1	Q4VXA5	237 aa	Known RBP	13.8	□□□□□ -0.2
PAX6-264	ENST00000640125	ZNF648	Q5T619	568 aa	Predicted RBP	13.8	□□□□□ -0.2
PAX6-264	ENST00000640125	ZNF470	Q6ECI4	717 aa		13.8	□□□□□ -0.2
PAX6-264	ENST00000640125	MARK2	Q7KZI7	788 aa	Known RBP	13.8	□□□□□ -0.2
PAX6-264	ENST00000640125	ADGRG6	Q86SQ4	1221 aa		13.8	□□□□□ -0.2
PAX6-264	ENST00000640125	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	13.8	□□□□□ -0.2
PAX6-264	ENST00000640125	KCNMB4	Q86W47	210 aa		13.8	□□□□□ -0.2
PAX6-264	ENST00000640125	HID1	Q8IV36	788 aa		13.8	□□□□□ -0.2
PAX6-264	ENST00000640125	LMNTD2	Q8IXW0	634 aa		13.8	□□□□□ -0.2
PAX6-264	ENST00000640125	DCLK2	Q8N568	766 aa		13.8	□□□□□ -0.2
PAX6-264	ENST00000640125	GPR150	Q8NGU9	434 aa		13.8	□□□□□ -0.2
PAX6-264	ENST00000640125	GABPB2	Q8TAK5	448 aa	Predicted RBP	13.8	□□□□□ -0.2
PAX6-264	ENST00000640125	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	13.8	□□□□□ -0.2
PAX6-264	ENST00000640125	OR1E3	Q8WZA6	343 aa		13.8	□□□□□ -0.2
PAX6-264	ENST00000640125	TSACC	Q96A04	125 aa	Predicted RBP	13.8	□□□□□ -0.2
PAX6-264	ENST00000640125	CERS2	Q96G23	380 aa		13.8	□□□□□ -0.2
PAX6-264	ENST00000640125	PDXP	Q96GD0	296 aa		13.8	□□□□□ -0.2
PAX6-264	ENST00000640125	SCARF2	Q96GP6	870 aa	Predicted RBP	13.8	□□□□□ -0.2
PAX6-264	ENST00000640125	FAM167B	Q9BTA0	163 aa		13.8	□□□□□ -0.2
PAX6-264	ENST00000640125	SLC13A1	Q9BZW2	595 aa		13.8	□□□□□ -0.2
PAX6-264	ENST00000640125	GAREM1	Q9H706	876 aa		13.8	□□□□□ -0.2
PAX6-264	ENST00000640125	RMI1	Q9H9A7	625 aa		13.8	□□□□□ -0.2
PAX6-264	ENST00000640125	PLAC1	Q9HBJ0	212 aa		13.8	□□□□□ -0.2
PAX6-264	ENST00000640125	CYP4F12	Q9HCS2	524 aa		13.8	□□□□□ -0.2
PAX6-264	ENST00000640125	PARD6A	Q9NPB6	346 aa		13.8	□□□□□ -0.2
PAX6-264	ENST00000640125	PPAN	Q9NQ55	473 aa	Known RBP	13.8	□□□□□ -0.2
PAX6-264	ENST00000640125	IL1RAPL1	Q9NZN1	696 aa		13.8	□□□□□ -0.2
PAX6-264	ENST00000640125	MARCH4	Q9P2E8	410 aa	Predicted RBP	13.8	□□□□□ -0.2
PAX6-264	ENST00000640125	ATXN10	Q9UBB4	475 aa		13.8	□□□□□ -0.2
PAX6-264	ENST00000640125	EP300	Q09472	2414 aa	Predicted RBP	13.79	□□□□□ -0.2
PAX6-264	ENST00000640125	IGLV3-16	A0A075B6K0	115 aa		13.79	□□□□□ -0.2
PAX6-264	ENST00000640125		H3BM21	787 aa		13.79	□□□□□ -0.2
PAX6-264	ENST00000640125	PFDN6	O15212	129 aa		13.79	□□□□□ -0.2
PAX6-264	ENST00000640125	YKT6	O15498	198 aa		13.79	□□□□□ -0.2
PAX6-264	ENST00000640125	NUAK1	O60285	661 aa		13.79	□□□□□ -0.2
PAX6-264	ENST00000640125	SPAG6	O75602	509 aa		13.79	□□□□□ -0.2
PAX6-264	ENST00000640125	GSTA2	P09210	222 aa		13.79	□□□□□ -0.2
PAX6-264	ENST00000640125	ERVK-10	P10266	1014 aa		13.79	□□□□□ -0.2
PAX6-264	ENST00000640125	ZNF8	P17098	575 aa	Predicted RBP	13.79	□□□□□ -0.2
PAX6-264	ENST00000640125	JUND	P17535	347 aa		13.79	□□□□□ -0.2
PAX6-264	ENST00000640125	OGN	P20774	298 aa	Known RBP	13.79	□□□□□ -0.2
PAX6-264	ENST00000640125	MCM3	P25205	808 aa		13.79	□□□□□ -0.2
PAX6-264	ENST00000640125	HNRNPK	P61978	463 aa	Known RBP eCLIP	13.79	□□□□□ -0.2
PAX6-264	ENST00000640125	SEMA3A	Q14563	771 aa		13.79	□□□□□ -0.2
PAX6-264	ENST00000640125	HSP90AA5P	Q58FG0	334 aa		13.79	□□□□□ -0.2
PAX6-264	ENST00000640125	ZNF542P	Q5EBM4	170 aa		13.79	□□□□□ -0.2
PAX6-264	ENST00000640125	PRAMEF14	Q5SWL7	426 aa		13.79	□□□□□ -0.2
PAX6-264	ENST00000640125	RNF187	Q5TA31	235 aa	Predicted RBP	13.79	□□□□□ -0.2
PAX6-264	ENST00000640125	KCTD16	Q68DU8	428 aa		13.79	□□□□□ -0.2
PAX6-264	ENST00000640125	CAPN12	Q6ZSI9	719 aa		13.79	□□□□□ -0.2
PAX6-264	ENST00000640125	RD3	Q7Z3Z2	195 aa		13.79	□□□□□ -0.2
PAX6-264	ENST00000640125	GALNT13	Q8IUC8	556 aa		13.79	□□□□□ -0.2
PAX6-264	ENST00000640125	PHACTR4	Q8IZ21	702 aa		13.79	□□□□□ -0.2
PAX6-264	ENST00000640125	UNC5B	Q8IZJ1	945 aa		13.79	□□□□□ -0.2
PAX6-264	ENST00000640125	RBFA	Q8N0V3	343 aa		13.79	□□□□□ -0.2
PAX6-264	ENST00000640125	SCG3	Q8WXD2	468 aa	Known RBP	13.79	□□□□□ -0.2
PAX6-264	ENST00000640125	ZNF514	Q96K75	400 aa	Predicted RBP	13.79	□□□□□ -0.2
PAX6-264	ENST00000640125	TCF12	Q99081	682 aa		13.79	□□□□□ -0.2
PAX6-264	ENST00000640125	CARS2	Q9HA77	564 aa	Known RBP	13.79	□□□□□ -0.2
PAX6-264	ENST00000640125	MRPL40	Q9NQ50	206 aa	Known RBP	13.79	□□□□□ -0.2
PAX6-264	ENST00000640125	APOBEC3B	Q9UH17	382 aa	Known RBP	13.79	□□□□□ -0.2
PAX6-264	ENST00000640125	KLF15	Q9UIH9	416 aa		13.79	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms