RNA–Protein interactions for RNA: ENST00000640104.1

SPIN3-235, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,776 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-235ENST00000640104 DDX53Q86TM3 631 aaKnown RBP13.22□□□□□ -0.29
SPIN3-235ENST00000640104 ITIH5Q86UX2 942 aa13.22□□□□□ -0.29
SPIN3-235ENST00000640104 LILRA2Q8N149 483 aa13.22□□□□□ -0.29
SPIN3-235ENST00000640104 ZNF483Q8TF39 744 aaPredicted RBP13.22□□□□□ -0.29
SPIN3-235ENST00000640104 PIH1D2Q8WWB5 315 aa13.22□□□□□ -0.29
SPIN3-235ENST00000640104 DCUN1D1Q96GG9 259 aa13.22□□□□□ -0.29
SPIN3-235ENST00000640104 SLC45A3Q96JT2 553 aa13.22□□□□□ -0.29
SPIN3-235ENST00000640104 GCNAQ96QF7 691 aa13.22□□□□□ -0.29
SPIN3-235ENST00000640104 TUBGCP5Q96RT8 1024 aa13.22□□□□□ -0.29
SPIN3-235ENST00000640104 PKP2Q99959 881 aa13.22□□□□□ -0.29
SPIN3-235ENST00000640104 HGH1Q9BTY7 390 aa13.22□□□□□ -0.29
SPIN3-235ENST00000640104 C2orf49Q9BVC5 232 aaPredicted RBP13.22□□□□□ -0.29
SPIN3-235ENST00000640104 P2RY12Q9H244 342 aa13.22□□□□□ -0.29
SPIN3-235ENST00000640104 MAGEE1Q9HCI5 957 aa13.22□□□□□ -0.29
SPIN3-235ENST00000640104 MRPL40Q9NQ50 206 aaKnown RBP13.22□□□□□ -0.29
SPIN3-235ENST00000640104 TBX21Q9UL17 535 aa13.22□□□□□ -0.29
SPIN3-235ENST00000640104 PRSS51A0A1B0GVH4 220 aa13.22□□□□□ -0.29
SPIN3-235ENST00000640104 CHRM1P11229 460 aaPredicted RBP13.22□□□□□ -0.29
SPIN3-235ENST00000640104 VCLP18206 1134 aa13.22□□□□□ -0.29
SPIN3-235ENST00000640104 LAG3P18627 525 aa13.22□□□□□ -0.29
SPIN3-235ENST00000640104 CLCN7P51798 805 aa13.22□□□□□ -0.29
SPIN3-235ENST00000640104 SLC7A2P52569 658 aa13.22□□□□□ -0.29
SPIN3-235ENST00000640104 ADARP55265 1226 aaKnown RBP13.22□□□□□ -0.29
SPIN3-235ENST00000640104 VPS26BQ4G0F5 336 aa13.22□□□□□ -0.29
SPIN3-235ENST00000640104 PABPC1LQ4VXU2 614 aaKnown RBP13.22□□□□□ -0.29
SPIN3-235ENST00000640104 RETSATQ6NUM9 610 aa13.22□□□□□ -0.29
SPIN3-235ENST00000640104 TPGS1Q6ZTW0 290 aa13.22□□□□□ -0.29
SPIN3-235ENST00000640104 STK40Q8N2I9 435 aa13.22□□□□□ -0.29
SPIN3-235ENST00000640104 DCBLD1Q8N8Z6 715 aa13.22□□□□□ -0.29
SPIN3-235ENST00000640104 ATP6V1E2Q96A05 226 aa13.22□□□□□ -0.29
SPIN3-235ENST00000640104 IL1RL2Q9HB29 575 aa13.22□□□□□ -0.29
SPIN3-235ENST00000640104 RC3H2Q9HBD1 1191 aaKnown RBP13.22□□□□□ -0.29
SPIN3-235ENST00000640104 TMEM39AQ9NV64 488 aa13.22□□□□□ -0.29
SPIN3-235ENST00000640104 ZNF225Q9UK10 706 aa13.22□□□□□ -0.29
SPIN3-235ENST00000640104 LSM7Q9UK45 103 aaKnown RBP13.22□□□□□ -0.29
SPIN3-235ENST00000640104 CLEC4EQ9ULY5 219 aa13.22□□□□□ -0.29
SPIN3-235ENST00000640104 PRMT5O14744 637 aaPredicted RBP13.21□□□□□ -0.29
SPIN3-235ENST00000640104 PRAMEF1O95521 474 aa13.21□□□□□ -0.29
SPIN3-235ENST00000640104 CAPN3P20807 821 aa13.21□□□□□ -0.29
SPIN3-235ENST00000640104 CD9P21926 228 aa13.21□□□□□ -0.29
SPIN3-235ENST00000640104 MNX1P50219 401 aaPredicted RBP13.21□□□□□ -0.29
SPIN3-235ENST00000640104 RPS6KA2Q15349 733 aa13.21□□□□□ -0.29
SPIN3-235ENST00000640104 PITRM1Q5JRX3 1037 aa13.21□□□□□ -0.29
SPIN3-235ENST00000640104 C8orf82Q6P1X6 216 aaPredicted RBP13.21□□□□□ -0.29
SPIN3-235ENST00000640104 SCIMPQ6UWF3 145 aa13.21□□□□□ -0.29
SPIN3-235ENST00000640104 GAREM2Q75VX8 874 aa13.21□□□□□ -0.29
SPIN3-235ENST00000640104 BBS7Q8IWZ6 715 aa13.21□□□□□ -0.29
SPIN3-235ENST00000640104 LRCH3Q96II8 777 aa13.21□□□□□ -0.29
SPIN3-235ENST00000640104 TOX2Q96NM4 488 aa13.21□□□□□ -0.29
SPIN3-235ENST00000640104 C1QTNF3Q9BXJ4 246 aa13.21□□□□□ -0.29
SPIN3-235ENST00000640104 CFAP97Q9P2B7 532 aa13.21□□□□□ -0.29
SPIN3-235ENST00000640104 TMEM181Q9P2C4 612 aa13.21□□□□□ -0.29
SPIN3-235ENST00000640104 COMMD10Q9Y6G5 202 aa13.21□□□□□ -0.29
SPIN3-235ENST00000640104 C1orf232A0A0U1RR37 186 aa13.21□□□□□ -0.29
SPIN3-235ENST00000640104 BBIP1A8MTZ0 92 aa13.21□□□□□ -0.29
SPIN3-235ENST00000640104 DNAJA2O60884 412 aa13.21□□□□□ -0.29
SPIN3-235ENST00000640104 ESRRBO95718 433 aa13.21□□□□□ -0.29
SPIN3-235ENST00000640104 MLYCDO95822 493 aa13.21□□□□□ -0.29
SPIN3-235ENST00000640104 ITGB6P18564 788 aa13.21□□□□□ -0.29
SPIN3-235ENST00000640104 CA5AP35218 305 aa13.21□□□□□ -0.29
SPIN3-235ENST00000640104 DIO3P55073 304 aa13.21□□□□□ -0.29
SPIN3-235ENST00000640104 BCL2L1Q07817 233 aa13.21□□□□□ -0.29
SPIN3-235ENST00000640104 TGFBIQ15582 683 aa13.21□□□□□ -0.29
SPIN3-235ENST00000640104 HACD2Q6Y1H2 254 aa13.21□□□□□ -0.29
SPIN3-235ENST00000640104 HS6ST3Q8IZP7 471 aa13.21□□□□□ -0.29
SPIN3-235ENST00000640104 PCYOX1LQ8NBM8 494 aa13.21□□□□□ -0.29
SPIN3-235ENST00000640104 DIS3LQ8TF46 1054 aaKnown RBP13.21□□□□□ -0.29
SPIN3-235ENST00000640104 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.21□□□□□ -0.297e-6■■■■■ 27.5
SPIN3-235ENST00000640104 PLEKHG4BQ96PX9 1271 aa13.21□□□□□ -0.29
SPIN3-235ENST00000640104 BOCQ9BWV1 1114 aa13.21□□□□□ -0.29
SPIN3-235ENST00000640104 TNKS2Q9H2K2 1166 aa13.21□□□□□ -0.29
SPIN3-235ENST00000640104 SDR39U1Q9NRG7 319 aaPredicted RBP13.21□□□□□ -0.29
SPIN3-235ENST00000640104 GMPR2Q9P2T1 348 aaKnown RBP13.21□□□□□ -0.29
SPIN3-235ENST00000640104 E2F3O00716 465 aa13.2□□□□□ -0.3
SPIN3-235ENST00000640104 GIPC1O14908 333 aa13.2□□□□□ -0.3
SPIN3-235ENST00000640104 GJA1P17302 382 aa13.2□□□□□ -0.3
SPIN3-235ENST00000640104 LMAN2Q12907 356 aa13.2□□□□□ -0.3
SPIN3-235ENST00000640104 SAMD4BQ5PRF9 694 aaKnown RBP13.2□□□□□ -0.3
SPIN3-235ENST00000640104 IL23RQ5VWK5 629 aa13.2□□□□□ -0.3
SPIN3-235ENST00000640104 PTRHD1Q6GMV3 140 aaKnown RBP13.2□□□□□ -0.3
SPIN3-235ENST00000640104 FBXL19Q6PCT2 694 aa13.2□□□□□ -0.3
SPIN3-235ENST00000640104 CYP2R1Q6VVX0 501 aa13.2□□□□□ -0.3
SPIN3-235ENST00000640104 FRA10AC1Q70Z53 315 aa13.2□□□□□ -0.3
SPIN3-235ENST00000640104 SERPINA9Q86WD7 417 aa13.2□□□□□ -0.3
SPIN3-235ENST00000640104 FAM217AQ8IXS0 508 aa13.2□□□□□ -0.3
SPIN3-235ENST00000640104 PHC3Q8NDX5 983 aa13.2□□□□□ -0.3
SPIN3-235ENST00000640104 MRPS31Q92665 395 aaKnown RBP13.2□□□□□ -0.3
SPIN3-235ENST00000640104 ROPN1LQ96C74 230 aa13.2□□□□□ -0.3
SPIN3-235ENST00000640104 ACOX2Q99424 681 aa13.2□□□□□ -0.3
SPIN3-235ENST00000640104 ZFYVE1Q9HBF4 777 aa13.2□□□□□ -0.3
SPIN3-235ENST00000640104 MAP10Q9P2G4 905 aa13.2□□□□□ -0.3
SPIN3-235ENST00000640104 CD300AQ9UGN4 299 aa13.2□□□□□ -0.3
SPIN3-235ENST00000640104 SH3BP1Q9Y3L3 701 aa13.2□□□□□ -0.3
SPIN3-235ENST00000640104 A8MX80 341 aa13.2□□□□□ -0.3
SPIN3-235ENST00000640104 ANGPT2O15123 496 aa13.2□□□□□ -0.3
SPIN3-235ENST00000640104 MAP3K13O43283 966 aa13.2□□□□□ -0.3
SPIN3-235ENST00000640104 RNASEH2AO75792 299 aaKnown RBP13.2□□□□□ -0.3
SPIN3-235ENST00000640104 CHEK2O96017 543 aa13.2□□□□□ -0.3
SPIN3-235ENST00000640104 UROSP10746 265 aa13.2□□□□□ -0.3
SPIN3-235ENST00000640104 ARL1P40616 181 aaPredicted RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms