RNA–Protein interactions for RNA: ENST00000639916.1

PAX6-259, Transcript of paired box 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAX6, Length 2,622 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-259ENST00000639916 MED10Q9BTT4 135 aa8.98□□□□□ -0.97
PAX6-259ENST00000639916 MIR1-1HGQ9H1L0 117 aa8.98□□□□□ -0.97
PAX6-259ENST00000639916 RSPH9Q9H1X1 276 aaPredicted RBP8.98□□□□□ -0.97
PAX6-259ENST00000639916 NPAP1Q9NZP6 1156 aa8.98□□□□□ -0.97
PAX6-259ENST00000639916 ATP6V1HQ9UI12 483 aa8.98□□□□□ -0.97
PAX6-259ENST00000639916 PCDHGA10Q9Y5H3 936 aa8.98□□□□□ -0.97
PAX6-259ENST00000639916 TIMM13Q9Y5L4 95 aaPredicted RBP8.98□□□□□ -0.97
PAX6-259ENST00000639916 A0A0B4J203 849 aa8.98□□□□□ -0.97
PAX6-259ENST00000639916 TRIM38O00635 465 aa8.98□□□□□ -0.97
PAX6-259ENST00000639916 NRP1O14786 923 aa8.98□□□□□ -0.97
PAX6-259ENST00000639916 AXIN1O15169 862 aa8.98□□□□□ -0.97
PAX6-259ENST00000639916 ADAMTS4O75173 837 aa8.98□□□□□ -0.97
PAX6-259ENST00000639916 PTTG1O95997 202 aa8.98□□□□□ -0.97
PAX6-259ENST00000639916 C1QAP02745 245 aa8.98□□□□□ -0.97
PAX6-259ENST00000639916 NPR3P17342 541 aa8.98□□□□□ -0.97
PAX6-259ENST00000639916 ATF6P18850 670 aa8.98□□□□□ -0.97
PAX6-259ENST00000639916 TGM2P21980 687 aa8.98□□□□□ -0.97
PAX6-259ENST00000639916 UQCRC1P31930 480 aa8.98□□□□□ -0.97
PAX6-259ENST00000639916 KRT20P35900 424 aa8.98□□□□□ -0.97
PAX6-259ENST00000639916 MATKP42679 507 aa8.98□□□□□ -0.97
PAX6-259ENST00000639916 HTR3AP46098 478 aa8.98□□□□□ -0.97
PAX6-259ENST00000639916 HAAOP46952 286 aa8.98□□□□□ -0.97
PAX6-259ENST00000639916 NUMBP49757 651 aa8.98□□□□□ -0.97
PAX6-259ENST00000639916 NDUFV1P49821 464 aa8.98□□□□□ -0.97
PAX6-259ENST00000639916 ETV1P50549 477 aa8.98□□□□□ -0.97
PAX6-259ENST00000639916 SCNN1GP51170 649 aa8.98□□□□□ -0.97
PAX6-259ENST00000639916 TRIM25Q14258 630 aaKnown RBP8.98□□□□□ -0.97
PAX6-259ENST00000639916 POLD3Q15054 466 aaPredicted RBP8.98□□□□□ -0.97
PAX6-259ENST00000639916 TAF12Q16514 161 aa8.98□□□□□ -0.97
PAX6-259ENST00000639916 CCNYL2Q5T2Q4 361 aa8.98□□□□□ -0.97
PAX6-259ENST00000639916 KIAA0319Q5VV43 1072 aa8.98□□□□□ -0.97
PAX6-259ENST00000639916 ZNF544Q6NX49 715 aa8.98□□□□□ -0.97
PAX6-259ENST00000639916 ERAP2Q6P179 960 aa8.98□□□□□ -0.97
PAX6-259ENST00000639916 FAM171BQ6P995 826 aa8.98□□□□□ -0.97
PAX6-259ENST00000639916 FIP1L1Q6UN15 594 aaKnown RBP8.98□□□□□ -0.97
PAX6-259ENST00000639916 LINC00523Q86TU6 105 aa8.98□□□□□ -0.97
PAX6-259ENST00000639916 DEFB106AQ8N104 65 aa8.98□□□□□ -0.97
PAX6-259ENST00000639916 PDIK1LQ8N165 341 aa8.98□□□□□ -0.97
PAX6-259ENST00000639916 CCDC185Q8N715 623 aa8.98□□□□□ -0.97
PAX6-259ENST00000639916 FLCNQ8NFG4 579 aa8.98□□□□□ -0.97
PAX6-259ENST00000639916 RHOXF1Q8NHV9 184 aa8.98□□□□□ -0.97
PAX6-259ENST00000639916 RP9Q8TA86 221 aaKnown RBP8.98□□□□□ -0.97
PAX6-259ENST00000639916 LRRN4Q8WUT4 740 aa8.98□□□□□ -0.97
PAX6-259ENST00000639916 SNAPC3Q92966 411 aa8.98□□□□□ -0.97
PAX6-259ENST00000639916 TMEM80Q96HE8 168 aa8.98□□□□□ -0.97
PAX6-259ENST00000639916 ZNF670Q9BS34 389 aa8.98□□□□□ -0.97
PAX6-259ENST00000639916 YTHDF1Q9BYJ9 559 aaKnown RBP8.98□□□□□ -0.97
PAX6-259ENST00000639916 LRRC40Q9H9A6 602 aa8.98□□□□□ -0.97
PAX6-259ENST00000639916 COG4Q9H9E3 785 aa8.98□□□□□ -0.97
PAX6-259ENST00000639916 CD320Q9NPF0 282 aa8.98□□□□□ -0.97
PAX6-259ENST00000639916 TCF7L2Q9NQB0 619 aa8.98□□□□□ -0.97
PAX6-259ENST00000639916 TNFRSF10DQ9UBN6 386 aa8.98□□□□□ -0.97
PAX6-259ENST00000639916 TCRBV3S1A0A5B6 114 aa8.97□□□□□ -0.97
PAX6-259ENST00000639916 CASTOR2A6NHX0 329 aa8.97□□□□□ -0.97
PAX6-259ENST00000639916 CXorf49A8MYA2 514 aaPredicted RBP8.97□□□□□ -0.97
PAX6-259ENST00000639916 LEUTXA8MZ59 168 aa8.97□□□□□ -0.97
PAX6-259ENST00000639916 KCNN4O15554 427 aa8.97□□□□□ -0.97
PAX6-259ENST00000639916 TBX1O43435 398 aa8.97□□□□□ -0.97
PAX6-259ENST00000639916 AVILO75366 819 aa8.97□□□□□ -0.97
PAX6-259ENST00000639916 AMHP03971 560 aa8.97□□□□□ -0.97
PAX6-259ENST00000639916 IFI30P13284 250 aa8.97□□□□□ -0.97
PAX6-259ENST00000639916 GLDCP23378 1020 aa8.97□□□□□ -0.97
PAX6-259ENST00000639916 CYP2F1P24903 491 aa8.97□□□□□ -0.97
PAX6-259ENST00000639916 CCND3P30281 292 aaPredicted RBP8.97□□□□□ -0.97
PAX6-259ENST00000639916 CD52P31358 61 aa8.97□□□□□ -0.97
PAX6-259ENST00000639916 SERPINH1P50454 418 aaKnown RBP8.97□□□□□ -0.97
PAX6-259ENST00000639916 YWHAZP63104 245 aaKnown RBP8.97□□□□□ -0.97
PAX6-259ENST00000639916 PLCL1Q15111 1095 aa8.97□□□□□ -0.97
PAX6-259ENST00000639916 PON2Q15165 354 aa8.97□□□□□ -0.97
PAX6-259ENST00000639916 DPYSL2Q16555 572 aa8.97□□□□□ -0.97
PAX6-259ENST00000639916 INTS11Q5TA45 600 aaKnown RBP8.97□□□□□ -0.97
PAX6-259ENST00000639916 BROXQ5VW32 411 aa8.97□□□□□ -0.97
PAX6-259ENST00000639916 CLEC20AQ6ZU45 233 aa8.97□□□□□ -0.97
PAX6-259ENST00000639916 LINC00518Q8N0U6 118 aa8.97□□□□□ -0.97
PAX6-259ENST00000639916 GALNT11Q8NCW6 608 aa8.97□□□□□ -0.97
PAX6-259ENST00000639916 PIK3C3Q8NEB9 887 aa8.97□□□□□ -0.97
PAX6-259ENST00000639916 MARVELD3Q96A59 401 aa8.97□□□□□ -0.97
PAX6-259ENST00000639916 RNF170Q96K19 258 aa8.97□□□□□ -0.97
PAX6-259ENST00000639916 OR52B2Q96RD2 323 aa8.97□□□□□ -0.97
PAX6-259ENST00000639916 USB1Q9BQ65 265 aaKnown RBP8.97□□□□□ -0.97
PAX6-259ENST00000639916 PAAF1Q9BRP4 392 aa8.97□□□□□ -0.97
PAX6-259ENST00000639916 IFT22Q9H7X7 185 aa8.97□□□□□ -0.97
PAX6-259ENST00000639916 LRRC4Q9HBW1 653 aa8.97□□□□□ -0.97
PAX6-259ENST00000639916 PADI3Q9ULW8 664 aa8.97□□□□□ -0.97
PAX6-259ENST00000639916 WBP11Q9Y2W2 641 aaKnown RBP8.97□□□□□ -0.97
PAX6-259ENST00000639916 RAD54BQ9Y620 910 aa8.97□□□□□ -0.97
PAX6-259ENST00000639916 SYNJ2BP-COX16A0A087WUM0 186 aa8.97□□□□□ -0.97
PAX6-259ENST00000639916 PI15O43692 258 aa8.97□□□□□ -0.97
PAX6-259ENST00000639916 GOT2P00505 430 aaKnown RBP8.97□□□□□ -0.97
PAX6-259ENST00000639916 SERPINE1P05121 402 aa8.97□□□□□ -0.97
PAX6-259ENST00000639916 ELNP15502 786 aa8.97□□□□□ -0.97
PAX6-259ENST00000639916 ARCN1P48444 511 aaKnown RBP8.97□□□□□ -0.97
PAX6-259ENST00000639916 LHX1P48742 406 aa8.97□□□□□ -0.97
PAX6-259ENST00000639916 RABGGTBP53611 331 aa8.97□□□□□ -0.97
PAX6-259ENST00000639916 POLR2GP62487 172 aaKnown RBP eCLIP8.97□□□□□ -0.97
PAX6-259ENST00000639916 ZNF33BQ06732 778 aa8.97□□□□□ -0.97
PAX6-259ENST00000639916 MGAT3Q09327 533 aa8.97□□□□□ -0.97
PAX6-259ENST00000639916 ART3Q13508 389 aa8.97□□□□□ -0.97
PAX6-259ENST00000639916 GEN1Q17RS7 908 aa8.97□□□□□ -0.97
PAX6-259ENST00000639916 SLC25A52Q3SY17 297 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms