RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 A0A0J9YYE9 177 aa21.31■■□□□ 1
CLN6-224ENST00000638076 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP21.31■■□□□ 1
CLN6-224ENST00000638076 CARNS1A5YM72 827 aa21.31■■□□□ 1
CLN6-224ENST00000638076 ACOT8O14734 319 aa21.31■■□□□ 1
CLN6-224ENST00000638076 SNX2O60749 519 aa21.31■■□□□ 1
CLN6-224ENST00000638076 TRBC1P01850 177 aa21.31■■□□□ 1
CLN6-224ENST00000638076 PRDX3P30048 256 aaKnown RBP21.31■■□□□ 1
CLN6-224ENST00000638076 CD70P32970 193 aa21.31■■□□□ 1
CLN6-224ENST00000638076 CREMQ03060 361 aa21.31■■□□□ 1
CLN6-224ENST00000638076 SFT2D3Q587I9 215 aa21.31■■□□□ 1
CLN6-224ENST00000638076 ZNF483Q8TF39 744 aaPredicted RBP21.31■■□□□ 1
CLN6-224ENST00000638076 NAT14Q8WUY8 206 aa21.31■■□□□ 1
CLN6-224ENST00000638076 KIAA1522Q9P206 1035 aaPredicted RBP21.31■■□□□ 1
CLN6-224ENST00000638076 CASQ2O14958 399 aaPredicted RBP21.3■■□□□ 1
CLN6-224ENST00000638076 HTRA2O43464 458 aaPredicted RBP21.3■■□□□ 1
CLN6-224ENST00000638076 CTSAP10619 480 aa21.3■■□□□ 1
CLN6-224ENST00000638076 MPP7Q5T2T1 576 aa21.3■■□□□ 1
CLN6-224ENST00000638076 TMEM154Q6P9G4 183 aa21.3■■□□□ 1
CLN6-224ENST00000638076 LAYNQ6UX15 382 aa21.3■■□□□ 1
CLN6-224ENST00000638076 CERS6Q6ZMG9 384 aa21.3■■□□□ 1
CLN6-224ENST00000638076 SYVN1Q86TM6 617 aa21.3■■□□□ 1
CLN6-224ENST00000638076 PQLC1Q8N2U9 271 aa21.3■■□□□ 1
CLN6-224ENST00000638076 HGH1Q9BTY7 390 aa21.3■■□□□ 1
CLN6-224ENST00000638076 TRAV19A0A0A6YYK7 116 aa21.3■■□□□ 1
CLN6-224ENST00000638076 GAPDHSO14556 408 aaPredicted RBP21.3■■□□□ 1
CLN6-224ENST00000638076 ZNF821O75541 412 aaPredicted RBP21.3■■□□□ 1
CLN6-224ENST00000638076 CLDN7O95471 211 aa21.3■■□□□ 1
CLN6-224ENST00000638076 TIMP1P01033 207 aa21.3■■□□□ 1
CLN6-224ENST00000638076 CA5AP35218 305 aa21.3■■□□□ 1
CLN6-224ENST00000638076 PSMD8P48556 350 aa21.3■■□□□ 1
CLN6-224ENST00000638076 RPL26P61254 145 aaKnown RBP21.3■■□□□ 1
CLN6-224ENST00000638076 LRRC26Q2I0M4 334 aa21.3■■□□□ 1
CLN6-224ENST00000638076 PLEKHG6Q3KR16 790 aa21.3■■□□□ 1
CLN6-224ENST00000638076 ZFP1Q6P2D0 407 aa21.3■■□□□ 1
CLN6-224ENST00000638076 SERPINA9Q86WD7 417 aa21.3■■□□□ 1
CLN6-224ENST00000638076 GPR65Q8IYL9 337 aa21.3■■□□□ 1
CLN6-224ENST00000638076 FIBCD1Q8N539 461 aa21.3■■□□□ 1
CLN6-224ENST00000638076 MIEF2Q96C03 454 aa21.3■■□□□ 1
CLN6-224ENST00000638076 RPL10LQ96L21 214 aaKnown RBP21.3■■□□□ 1
CLN6-224ENST00000638076 C6orf203Q9P0P8 240 aaPredicted RBP21.3■■□□□ 1
CLN6-224ENST00000638076 TSR3Q9UJK0 312 aaKnown RBP21.3■■□□□ 1
CLN6-224ENST00000638076 ZNF225Q9UK10 706 aa21.3■■□□□ 1
CLN6-224ENST00000638076 DHRS7Q9Y394 339 aa21.3■■□□□ 1
CLN6-224ENST00000638076 ASB1Q9Y576 335 aa21.3■■□□□ 1
CLN6-224ENST00000638076 PCDHB1Q9Y5F3 818 aa21.3■■□□□ 1
CLN6-224ENST00000638076 TRIM43BA6NCK2 446 aa21.29■■□□□ 1
CLN6-224ENST00000638076 C8AP07357 584 aa21.29■■□□□ 1
CLN6-224ENST00000638076 HGFP14210 728 aa21.29■■□□□ 1
CLN6-224ENST00000638076 LBPP18428 481 aa21.29■■□□□ 1
CLN6-224ENST00000638076 HNF1BP35680 557 aa21.29■■□□□ 1
CLN6-224ENST00000638076 NAA20P61599 178 aa21.29■■□□□ 1
CLN6-224ENST00000638076 TGFBIQ15582 683 aa21.29■■□□□ 1
CLN6-224ENST00000638076 RBBP7Q16576 425 aa21.29■■□□□ 1
CLN6-224ENST00000638076 FIBINQ8TAL6 211 aa21.29■■□□□ 1
CLN6-224ENST00000638076 TRIM43Q96BQ3 446 aaPredicted RBP21.29■■□□□ 1
CLN6-224ENST00000638076 ASB9Q96DX5 294 aa21.29■■□□□ 1
CLN6-224ENST00000638076 BOCQ9BWV1 1114 aa21.29■■□□□ 1
CLN6-224ENST00000638076 CLPBQ9H078 707 aa21.29■■□□□ 1
CLN6-224ENST00000638076 SMG9Q9H0W8 520 aaKnown RBP21.29■■□□□ 1
CLN6-224ENST00000638076 EBF3Q9H4W6 596 aa21.29■■□□□ 1
CLN6-224ENST00000638076 ASB8Q9H765 288 aa21.29■■□□□ 1
CLN6-224ENST00000638076 SPAG4Q9NPE6 437 aa21.29■■□□□ 1
CLN6-224ENST00000638076 ABCB8Q9NUT2 735 aa21.29■■□□□ 1
CLN6-224ENST00000638076 GEMIN8Q9NWZ8 242 aaKnown RBP21.29■■□□□ 1
CLN6-224ENST00000638076 INTS6Q9UL03 887 aaKnown RBP21.29■■□□□ 1
CLN6-224ENST00000638076 A6NHS1 94 aa21.29■■□□□ 1
CLN6-224ENST00000638076 LEFTY2O00292 366 aa21.29■■□□□ 1
CLN6-224ENST00000638076 ESRRBO95718 433 aa21.29■■□□□ 1
CLN6-224ENST00000638076 MLYCDO95822 493 aa21.29■■□□□ 1
CLN6-224ENST00000638076 MAPK8P45983 427 aa21.29■■□□□ 1
CLN6-224ENST00000638076 CSNK1DP48730 415 aa21.29■■□□□ 1
CLN6-224ENST00000638076 AQP4P55087 323 aa21.29■■□□□ 1
CLN6-224ENST00000638076 PTRHD1Q6GMV3 140 aaKnown RBP21.29■■□□□ 1
CLN6-224ENST00000638076 OTOP2Q7RTS6 562 aa21.29■■□□□ 1
CLN6-224ENST00000638076 DLG3Q92796 817 aa21.29■■□□□ 1
CLN6-224ENST00000638076 CIPCQ9C0C6 399 aa21.29■■□□□ 1
CLN6-224ENST00000638076 ATP13A3Q9H7F0 1226 aa21.29■■□□□ 1
CLN6-224ENST00000638076 ZDHHC7Q9NXF8 308 aa21.29■■□□□ 1
CLN6-224ENST00000638076 EIF2B4Q9UI10 523 aaKnown RBP21.29■■□□□ 1
CLN6-224ENST00000638076 CROTQ9UKG9 612 aa21.29■■□□□ 1
CLN6-224ENST00000638076 TMCO1Q9UM00 188 aa21.29■■□□□ 1
CLN6-224ENST00000638076 NR5A2O00482 541 aa21.28■■□□□ 1
CLN6-224ENST00000638076 EFCAB14O75071 495 aa21.28■■□□□ 1
CLN6-224ENST00000638076 IGSF6O95976 241 aa21.28■■□□□ 1
CLN6-224ENST00000638076 ZNF7P17097 686 aaPredicted RBP21.28■■□□□ 1
CLN6-224ENST00000638076 RALGDSQ12967 914 aa21.28■■□□□ 1
CLN6-224ENST00000638076 NFATC2Q13469 925 aa21.28■■□□□ 1
CLN6-224ENST00000638076 GSTA3Q16772 222 aa21.28■■□□□ 1
CLN6-224ENST00000638076 DGKKQ5KSL6 1271 aa21.28■■□□□ 1
CLN6-224ENST00000638076 MIER2Q8N344 545 aa21.28■■□□□ 1
CLN6-224ENST00000638076 OR56A4Q8NGH8 313 aa21.28■■□□□ 1
CLN6-224ENST00000638076 GRIN3AQ8TCU5 1115 aa21.28■■□□□ 1
CLN6-224ENST00000638076 GATA6Q92908 595 aa21.28■■□□□ 1
CLN6-224ENST00000638076 PPP2R3CQ969Q6 453 aa21.28■■□□□ 1
CLN6-224ENST00000638076 PLEKHG4BQ96PX9 1271 aa21.28■■□□□ 1
CLN6-224ENST00000638076 MRPL40Q9NQ50 206 aaKnown RBP21.28■■□□□ 1
CLN6-224ENST00000638076 SUCOQ9UBS9 1254 aaKnown RBP21.28■■□□□ 1
CLN6-224ENST00000638076 GOLGA8CPA6NN73 597 aa21.28■■□□□ 1
CLN6-224ENST00000638076 A8MX80 341 aa21.28■■□□□ 1
CLN6-224ENST00000638076 E2F3O00716 465 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms