RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 STAT2P52630 851 aa3□□□□□ -1.93
VIM-210ENST00000637053 CLDN8P56748 225 aa3□□□□□ -1.93
VIM-210ENST00000637053 RAB14P61106 215 aa3□□□□□ -1.93
VIM-210ENST00000637053 YWHAEP62258 255 aaKnown RBP3□□□□□ -1.93
VIM-210ENST00000637053 RPL7AP62424 266 aaKnown RBP3□□□□□ -1.93
VIM-210ENST00000637053 CEBPZQ03701 1054 aaKnown RBP3□□□□□ -1.93
VIM-210ENST00000637053 ENPEPQ07075 957 aa3□□□□□ -1.93
VIM-210ENST00000637053 TGM3Q08188 693 aa3□□□□□ -1.93
VIM-210ENST00000637053 PPP3CAQ08209 521 aa3□□□□□ -1.93
VIM-210ENST00000637053 RASGEF1BQ0VAM2 473 aa3□□□□□ -1.93
VIM-210ENST00000637053 FADDQ13158 208 aa3□□□□□ -1.93
VIM-210ENST00000637053 MAB21L1Q13394 359 aa3□□□□□ -1.93
VIM-210ENST00000637053 BAATQ14032 418 aaPredicted RBP3□□□□□ -1.93
VIM-210ENST00000637053 IL18Q14116 193 aa3□□□□□ -1.93
VIM-210ENST00000637053 IL11RAQ14626 422 aa3□□□□□ -1.93
VIM-210ENST00000637053 SPCS2Q15005 226 aa3□□□□□ -1.93
VIM-210ENST00000637053 SLC39A14Q15043 492 aa3□□□□□ -1.93
VIM-210ENST00000637053 SGCAQ16586 387 aa3□□□□□ -1.93
VIM-210ENST00000637053 KYAT1Q16773 422 aa3□□□□□ -1.93
VIM-210ENST00000637053 BTBD16Q32M84 506 aa3□□□□□ -1.93
VIM-210ENST00000637053 CCDC153Q494R4 210 aa3□□□□□ -1.93
VIM-210ENST00000637053 USH1GQ495M9 461 aa3□□□□□ -1.93
VIM-210ENST00000637053 MPPE1Q53F39 396 aa3□□□□□ -1.93
VIM-210ENST00000637053 KLHL26Q53HC5 615 aa3□□□□□ -1.93
VIM-210ENST00000637053 TAF1BQ53T94 588 aaPredicted RBP3□□□□□ -1.93
VIM-210ENST00000637053 NOL9Q5SY16 702 aaKnown RBP3□□□□□ -1.93
VIM-210ENST00000637053 DCST1Q5T197 706 aa3□□□□□ -1.93
VIM-210ENST00000637053 GKAP1Q5VSY0 366 aaPredicted RBP3□□□□□ -1.93
VIM-210ENST00000637053 DAB2IPQ5VWQ8 1189 aa3□□□□□ -1.93
VIM-210ENST00000637053 SLFN13Q68D06 897 aa3□□□□□ -1.93
VIM-210ENST00000637053 C18orf63Q68DL7 685 aa3□□□□□ -1.93
VIM-210ENST00000637053 CWF19L1Q69YN2 538 aaKnown RBP3□□□□□ -1.93
VIM-210ENST00000637053 CLEC6AQ6EIG7 209 aa3□□□□□ -1.93
VIM-210ENST00000637053 CTRB2Q6GPI1 263 aa3□□□□□ -1.93
VIM-210ENST00000637053 NCAPH2Q6IBW4 605 aa3□□□□□ -1.93
VIM-210ENST00000637053 JADE1Q6IE81 842 aa3□□□□□ -1.93
VIM-210ENST00000637053 SULT1C3Q6IMI6 304 aa3□□□□□ -1.93
VIM-210ENST00000637053 NEPROQ6NW34 567 aa3□□□□□ -1.93
VIM-210ENST00000637053 METTL2BQ6P1Q9 378 aaKnown RBP3□□□□□ -1.93
VIM-210ENST00000637053 SCYL2Q6P3W7 929 aa3□□□□□ -1.93
VIM-210ENST00000637053 CYB5D1Q6P9G0 228 aa3□□□□□ -1.93
VIM-210ENST00000637053 LAYNQ6UX15 382 aa3□□□□□ -1.93
VIM-210ENST00000637053 DPP8Q6V1X1 898 aaPredicted RBP3□□□□□ -1.93
VIM-210ENST00000637053 SCARA5Q6ZMJ2 495 aa3□□□□□ -1.93
VIM-210ENST00000637053 C15orf39Q6ZRI6 1047 aa3□□□□□ -1.93
VIM-210ENST00000637053 SLC24A5Q71RS6 500 aa3□□□□□ -1.93
VIM-210ENST00000637053 USP37Q86T82 979 aa3□□□□□ -1.93
VIM-210ENST00000637053 WDR5BQ86VZ2 330 aa3□□□□□ -1.93
VIM-210ENST00000637053 FAM228AQ86W67 206 aa3□□□□□ -1.93
VIM-210ENST00000637053 FAM131BQ86XD5 332 aa3□□□□□ -1.93
VIM-210ENST00000637053 DHX40Q8IX18 779 aaKnown RBP3□□□□□ -1.93
VIM-210ENST00000637053 KLHL7Q8IXQ5 586 aa3□□□□□ -1.93
VIM-210ENST00000637053 CFAP206Q8IYR0 622 aa3□□□□□ -1.93
VIM-210ENST00000637053 HACE1Q8IYU2 909 aa3□□□□□ -1.93
VIM-210ENST00000637053 PLD5Q8N7P1 536 aa3□□□□□ -1.93
VIM-210ENST00000637053 CCNYL1Q8N7R7 359 aa3□□□□□ -1.93
VIM-210ENST00000637053 CAMKVQ8NCB2 501 aa3□□□□□ -1.93
VIM-210ENST00000637053 GPR156Q8NFN8 814 aa3□□□□□ -1.93
VIM-210ENST00000637053 OR2T3Q8NH03 318 aa3□□□□□ -1.93
VIM-210ENST00000637053 ANGPTL6Q8NI99 470 aa3□□□□□ -1.93
VIM-210ENST00000637053 EXOC6Q8TAG9 804 aa3□□□□□ -1.93
VIM-210ENST00000637053 RAB3IL1Q8TBN0 382 aa3□□□□□ -1.93
VIM-210ENST00000637053 TEX47Q8TBZ9 253 aa3□□□□□ -1.93
VIM-210ENST00000637053 BRIX1Q8TDN6 353 aaKnown RBP3□□□□□ -1.93
VIM-210ENST00000637053 CD300LFQ8TDQ1 290 aa3□□□□□ -1.93
VIM-210ENST00000637053 TSEN15Q8WW01 171 aaKnown RBP3□□□□□ -1.93
VIM-210ENST00000637053 IRGQQ8WZA9 623 aa3□□□□□ -1.93
VIM-210ENST00000637053 CPT1BQ92523 772 aa3□□□□□ -1.93
VIM-210ENST00000637053 TANKQ92844 425 aa3□□□□□ -1.93
VIM-210ENST00000637053 APBB2Q92870 758 aa3□□□□□ -1.93
VIM-210ENST00000637053 GTF3C6Q969F1 213 aa3□□□□□ -1.93
VIM-210ENST00000637053 GFM2Q969S9 779 aaKnown RBP3□□□□□ -1.93
VIM-210ENST00000637053 ZNF707Q96C28 371 aaPredicted RBP3□□□□□ -1.93
VIM-210ENST00000637053 SPDL1Q96EA4 605 aa3□□□□□ -1.93
VIM-210ENST00000637053 EEF2KMTQ96G04 330 aa3□□□□□ -1.93
VIM-210ENST00000637053 C5orf30Q96GV9 206 aa3□□□□□ -1.93
VIM-210ENST00000637053 FBXL20Q96IG2 436 aa3□□□□□ -1.93
VIM-210ENST00000637053 CEP19Q96LK0 163 aa3□□□□□ -1.93
VIM-210ENST00000637053 NECTIN4Q96NY8 510 aa3□□□□□ -1.93
VIM-210ENST00000637053 ACBD6Q9BR61 282 aa3□□□□□ -1.93
VIM-210ENST00000637053 CCM2Q9BSQ5 444 aa3□□□□□ -1.93
VIM-210ENST00000637053 OSBPL6Q9BZF3 934 aa3□□□□□ -1.93
VIM-210ENST00000637053 TINAGL1Q9GZM7 467 aaPredicted RBP3□□□□□ -1.93
VIM-210ENST00000637053 ZNF350Q9GZX5 532 aa3□□□□□ -1.93
VIM-210ENST00000637053 PRDM12Q9H4Q4 367 aa3□□□□□ -1.93
VIM-210ENST00000637053 ATP13A3Q9H7F0 1226 aa3□□□□□ -1.93
VIM-210ENST00000637053 ECT2Q9H8V3 914 aa3□□□□□ -1.93
VIM-210ENST00000637053 IPPKQ9H8X2 491 aa3□□□□□ -1.93
VIM-210ENST00000637053 UNKLQ9H9P5 680 aaKnown RBP3□□□□□ -1.93
VIM-210ENST00000637053 POLR1BQ9H9Y6 1135 aa3□□□□□ -1.93
VIM-210ENST00000637053 GP6Q9HCN6 339 aa3□□□□□ -1.93
VIM-210ENST00000637053 SEMA4BQ9NPR2 832 aaPredicted RBP3□□□□□ -1.93
VIM-210ENST00000637053 CNNM1Q9NRU3 951 aa3□□□□□ -1.93
VIM-210ENST00000637053 ETNK2Q9NVF9 386 aa3□□□□□ -1.93
VIM-210ENST00000637053 FBXO34Q9NWN3 711 aa3□□□□□ -1.93
VIM-210ENST00000637053 HYPKQ9NX55 129 aa3□□□□□ -1.93
VIM-210ENST00000637053 TAS2R7Q9NYW3 318 aa3□□□□□ -1.93
VIM-210ENST00000637053 RCOR3Q9P2K3 495 aaPredicted RBP3□□□□□ -1.93
VIM-210ENST00000637053 DKK4Q9UBT3 224 aa3□□□□□ -1.93
VIM-210ENST00000637053 CTSFQ9UBX1 484 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms