RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 GCN1Q92616 2671 aaKnown RBP17.71■□□□□ 0.43
PNKP-225ENST00000636214 C9orf172C9J069 976 aa17.71■□□□□ 0.43
PNKP-225ENST00000636214 KMOO15229 486 aa17.71■□□□□ 0.43
PNKP-225ENST00000636214 CCL4P13236 92 aa17.71■□□□□ 0.43
PNKP-225ENST00000636214 PECAM1P16284 738 aaPredicted RBP17.71■□□□□ 0.43
PNKP-225ENST00000636214 VCLP18206 1134 aa17.71■□□□□ 0.43
PNKP-225ENST00000636214 CSF2RBP32927 897 aa17.71■□□□□ 0.43
PNKP-225ENST00000636214 EPHA4P54764 986 aa17.71■□□□□ 0.43
PNKP-225ENST00000636214 PLA2G4EQ3MJ16 856 aa17.71■□□□□ 0.43
PNKP-225ENST00000636214 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.71■□□□□ 0.43
PNKP-225ENST00000636214 FAM182AQ5T1J6 154 aa17.71■□□□□ 0.43
PNKP-225ENST00000636214 C11orf63Q6NUN7 778 aa17.71■□□□□ 0.43
PNKP-225ENST00000636214 IYDQ6PHW0 289 aa17.71■□□□□ 0.43
PNKP-225ENST00000636214 PID1Q7Z2X4 250 aa17.71■□□□□ 0.43
PNKP-225ENST00000636214 LRRTM4Q86VH4 590 aa17.71■□□□□ 0.43
PNKP-225ENST00000636214 KATNAL2Q8IYT4 538 aa17.71■□□□□ 0.43
PNKP-225ENST00000636214 TC2NQ8N9U0 490 aa17.71■□□□□ 0.43
PNKP-225ENST00000636214 NCSTNQ92542 709 aa17.71■□□□□ 0.43
PNKP-225ENST00000636214 HAUS1Q96CS2 278 aa17.71■□□□□ 0.43
PNKP-225ENST00000636214 TTC25Q96NG3 672 aa17.71■□□□□ 0.43
PNKP-225ENST00000636214 ARHGAP9Q9BRR9 750 aa17.71■□□□□ 0.43
PNKP-225ENST00000636214 FSD1LQ9BXM9 530 aa17.71■□□□□ 0.43
PNKP-225ENST00000636214 EPB41L1Q9H4G0 881 aa17.71■□□□□ 0.43
PNKP-225ENST00000636214 TRABDQ9H4I3 376 aa17.71■□□□□ 0.43
PNKP-225ENST00000636214 SLC39A1Q9NY26 324 aa17.71■□□□□ 0.43
PNKP-225ENST00000636214 PCDHA13Q9Y5I0 950 aa17.71■□□□□ 0.43
PNKP-225ENST00000636214 SPTA1P02549 2419 aa17.7■□□□□ 0.42
PNKP-225ENST00000636214 MACROD2A1Z1Q3 448 aa17.7■□□□□ 0.42
PNKP-225ENST00000636214 PDZK1P1A8MUH7 402 aa17.7■□□□□ 0.42
PNKP-225ENST00000636214 HACD1B0YJ81 288 aa17.7■□□□□ 0.42
PNKP-225ENST00000636214 EFSO43281 561 aa17.7■□□□□ 0.42
PNKP-225ENST00000636214 NFKB1P19838 968 aa17.7■□□□□ 0.42
PNKP-225ENST00000636214 WNT3AP56704 352 aa17.7■□□□□ 0.42
PNKP-225ENST00000636214 RAB15P59190 212 aa17.7■□□□□ 0.42
PNKP-225ENST00000636214 ZDHHC20Q5W0Z9 365 aa17.7■□□□□ 0.42
PNKP-225ENST00000636214 ADGRG6Q86SQ4 1221 aa17.7■□□□□ 0.42
PNKP-225ENST00000636214 ZNF605Q86T29 641 aa17.7■□□□□ 0.42
PNKP-225ENST00000636214 TTC9Q92623 222 aa17.7■□□□□ 0.42
PNKP-225ENST00000636214 ART4Q93070 314 aa17.7■□□□□ 0.42
PNKP-225ENST00000636214 TADA1Q96BN2 335 aa17.7■□□□□ 0.42
PNKP-225ENST00000636214 EID2BQ96D98 161 aa17.7■□□□□ 0.42
PNKP-225ENST00000636214 CALR3Q96L12 384 aaKnown RBP17.7■□□□□ 0.42
PNKP-225ENST00000636214 PLEKHG4BQ96PX9 1271 aa17.7■□□□□ 0.42
PNKP-225ENST00000636214 ASPSCR1Q9BZE9 553 aa17.7■□□□□ 0.42
PNKP-225ENST00000636214 ZCCHC2Q9C0B9 1178 aaKnown RBP17.7■□□□□ 0.42
PNKP-225ENST00000636214 BPIFA1Q9NP55 256 aa17.7■□□□□ 0.42
PNKP-225ENST00000636214 HACD3Q9P035 362 aa17.7■□□□□ 0.42
PNKP-225ENST00000636214 RSPH14Q9UHP6 348 aa17.7■□□□□ 0.42
PNKP-225ENST00000636214 HELZ2Q9BYK8 2649 aaKnown RBP17.7■□□□□ 0.42
PNKP-225ENST00000636214 ZNF462Q96JM2 2506 aa17.69■□□□□ 0.42
PNKP-225ENST00000636214 hCG_1818297A0A087WSY0 165 aa17.69■□□□□ 0.42
PNKP-225ENST00000636214 EFCAB7A8K855 629 aa17.69■□□□□ 0.42
PNKP-225ENST00000636214 H7C0C1 242 aa17.69■□□□□ 0.42
PNKP-225ENST00000636214 VEGFDO43915 354 aa17.69■□□□□ 0.42
PNKP-225ENST00000636214 C1QL1O75973 258 aa17.69■□□□□ 0.42
PNKP-225ENST00000636214 CDK14O94921 469 aa17.69■□□□□ 0.42
PNKP-225ENST00000636214 EML2O95834 649 aa17.69■□□□□ 0.42
PNKP-225ENST00000636214 VIPP01282 170 aa17.69■□□□□ 0.42
PNKP-225ENST00000636214 FGF3P11487 239 aaPredicted RBP17.69■□□□□ 0.42
PNKP-225ENST00000636214 BPIP17213 487 aa17.69■□□□□ 0.42
PNKP-225ENST00000636214 CTNNA2P26232 953 aa17.69■□□□□ 0.42
PNKP-225ENST00000636214 CETN2P41208 172 aa17.69■□□□□ 0.42
PNKP-225ENST00000636214 ATP5OP48047 213 aa17.69■□□□□ 0.42
PNKP-225ENST00000636214 CLCNKAP51800 687 aa17.69■□□□□ 0.42
PNKP-225ENST00000636214 LY6DQ14210 128 aa17.69■□□□□ 0.42
PNKP-225ENST00000636214 PPP2R5EQ16537 467 aa17.69■□□□□ 0.42
PNKP-225ENST00000636214 TAZQ16635 292 aa17.69■□□□□ 0.42
PNKP-225ENST00000636214 ZNF648Q5T619 568 aaPredicted RBP17.69■□□□□ 0.42
PNKP-225ENST00000636214 DCAF12Q5T6F0 453 aa17.69■□□□□ 0.42
PNKP-225ENST00000636214 WDR74Q6RFH5 385 aaPredicted RBP17.69■□□□□ 0.42
PNKP-225ENST00000636214 GLT6D1Q7Z4J2 308 aa17.69■□□□□ 0.42
PNKP-225ENST00000636214 VASH2Q86V25 355 aa17.69■□□□□ 0.42
PNKP-225ENST00000636214 TRAPPC5Q8IUR0 188 aa17.69■□□□□ 0.42
PNKP-225ENST00000636214 ZNF843Q8N446 348 aa17.69■□□□□ 0.42
PNKP-225ENST00000636214 SLC25A41Q8N5S1 370 aa17.69■□□□□ 0.42
PNKP-225ENST00000636214 IL22RA1Q8N6P7 574 aa17.69■□□□□ 0.42
PNKP-225ENST00000636214 HTR3CQ8WXA8 447 aa17.69■□□□□ 0.42
PNKP-225ENST00000636214 QKIQ96PU8 341 aaKnown RBP eCLIP17.69■□□□□ 0.42
PNKP-225ENST00000636214 TEFMQ96QE5 360 aaKnown RBP17.69■□□□□ 0.42
PNKP-225ENST00000636214 TIMM29Q9BSF4 260 aa17.69■□□□□ 0.42
PNKP-225ENST00000636214 DDA1Q9BW61 102 aa17.69■□□□□ 0.42
PNKP-225ENST00000636214 GOLPH3Q9H4A6 298 aa17.69■□□□□ 0.42
PNKP-225ENST00000636214 PRDM8Q9NQV8 689 aa17.69■□□□□ 0.42
PNKP-225ENST00000636214 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.69■□□□□ 0.42
PNKP-225ENST00000636214 TMEM9Q9P0T7 183 aa17.69■□□□□ 0.42
PNKP-225ENST00000636214 CPNE7Q9UBL6 633 aa17.69■□□□□ 0.42
PNKP-225ENST00000636214 TRHDEQ9UKU6 1024 aa17.69■□□□□ 0.42
PNKP-225ENST00000636214 DNAJC16Q9Y2G8 782 aa17.69■□□□□ 0.42
PNKP-225ENST00000636214 PCDHGA3Q9Y5H0 932 aa17.69■□□□□ 0.42
PNKP-225ENST00000636214 PCYT1BQ9Y5K3 369 aaPredicted RBP17.69■□□□□ 0.42
PNKP-225ENST00000636214 A8MU76 341 aa17.68■□□□□ 0.42
PNKP-225ENST00000636214 F5H423 210 aaPredicted RBP17.68■□□□□ 0.42
PNKP-225ENST00000636214 MTX2O75431 263 aa17.68■□□□□ 0.42
PNKP-225ENST00000636214 STK10O94804 968 aaKnown RBP17.68■□□□□ 0.42
PNKP-225ENST00000636214 LCA5LO95447 670 aa17.68■□□□□ 0.42
PNKP-225ENST00000636214 EPOP01588 193 aa17.68■□□□□ 0.42
PNKP-225ENST00000636214 ZNF7P17097 686 aaPredicted RBP17.68■□□□□ 0.42
PNKP-225ENST00000636214 HLA-DPA1P20036 260 aa17.68■□□□□ 0.42
PNKP-225ENST00000636214 HMGCLP35914 325 aa17.68■□□□□ 0.42
PNKP-225ENST00000636214 SPAM1P38567 509 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms