RNA–Protein interactions for RNA: ENST00000627738.1

SOX2-OT-244, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 692 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-244ENST00000627738 CCDC63Q8NA47 563 aa9.86□□□□□ -0.83
SOX2-OT-244ENST00000627738 KCTD4Q8WVF5 259 aa9.86□□□□□ -0.83
SOX2-OT-244ENST00000627738 CHMP6Q96FZ7 201 aa9.86□□□□□ -0.83
SOX2-OT-244ENST00000627738 TSNARE1Q96NA8 513 aa9.86□□□□□ -0.83
SOX2-OT-244ENST00000627738 ZNF317Q96PQ6 595 aaPredicted RBP9.86□□□□□ -0.83
SOX2-OT-244ENST00000627738 PLEKHG4BQ96PX9 1271 aa9.86□□□□□ -0.83
SOX2-OT-244ENST00000627738 CCDC68Q9H2F9 335 aa9.86□□□□□ -0.83
SOX2-OT-244ENST00000627738 BRWD1Q9NSI6 2320 aa9.86□□□□□ -0.83
SOX2-OT-244ENST00000627738 CRLS1Q9UJA2 301 aa9.86□□□□□ -0.83
SOX2-OT-244ENST00000627738 RUVBL2Q9Y230 463 aaKnown RBP9.86□□□□□ -0.83
SOX2-OT-244ENST00000627738 ITM2BQ9Y287 266 aa9.86□□□□□ -0.83
SOX2-OT-244ENST00000627738 BPTFQ12830 3046 aa9.85□□□□□ -0.83
SOX2-OT-244ENST00000627738 ZNF106Q9H2Y7 1883 aaKnown RBP9.85□□□□□ -0.83
SOX2-OT-244ENST00000627738 TRBV5-4A0A0C4DH59 114 aa9.85□□□□□ -0.83
SOX2-OT-244ENST00000627738 AREL1O15033 823 aa9.85□□□□□ -0.83
SOX2-OT-244ENST00000627738 SPINT1O43278 529 aa9.85□□□□□ -0.83
SOX2-OT-244ENST00000627738 SYNCRIPO60506 623 aaKnown RBP9.85□□□□□ -0.83
SOX2-OT-244ENST00000627738 DNAJC6O75061 913 aa9.85□□□□□ -0.83
SOX2-OT-244ENST00000627738 RHOBTB1O94844 696 aa9.85□□□□□ -0.83
SOX2-OT-244ENST00000627738 WISP3O95389 354 aaPredicted RBP9.85□□□□□ -0.83
SOX2-OT-244ENST00000627738 PROCP04070 461 aa9.85□□□□□ -0.83
SOX2-OT-244ENST00000627738 VIMP08670 466 aaKnown RBP9.85□□□□□ -0.83
SOX2-OT-244ENST00000627738 ELFN1P0C7U0 828 aa9.85□□□□□ -0.83
SOX2-OT-244ENST00000627738 NEFHP12036 1026 aa9.85□□□□□ -0.83
SOX2-OT-244ENST00000627738 COL6A2P12110 1019 aa9.85□□□□□ -0.83
SOX2-OT-244ENST00000627738 PKMP14618 531 aaKnown RBP9.85□□□□□ -0.83
SOX2-OT-244ENST00000627738 IL9P15248 144 aa9.85□□□□□ -0.83
SOX2-OT-244ENST00000627738 TAC1P20366 129 aa9.85□□□□□ -0.83
SOX2-OT-244ENST00000627738 BGNP21810 368 aa9.85□□□□□ -0.83
SOX2-OT-244ENST00000627738 ACRV1P26436 265 aa9.85□□□□□ -0.83
SOX2-OT-244ENST00000627738 NTSR1P30989 418 aa9.85□□□□□ -0.83
SOX2-OT-244ENST00000627738 PPARGP37231 505 aaPredicted RBP9.85□□□□□ -0.83
SOX2-OT-244ENST00000627738 ETV3P41162 512 aa9.85□□□□□ -0.83
SOX2-OT-244ENST00000627738 PTGER3P43115 390 aa9.85□□□□□ -0.83
SOX2-OT-244ENST00000627738 TIAL1Q01085 375 aaKnown RBP eCLIP9.85□□□□□ -0.83
SOX2-OT-244ENST00000627738 PFKPQ01813 784 aa9.85□□□□□ -0.83
SOX2-OT-244ENST00000627738 ELP6Q0PNE2 266 aa9.85□□□□□ -0.83
SOX2-OT-244ENST00000627738 GRSF1Q12849 480 aaKnown RBP eCLIP9.85□□□□□ -0.83
SOX2-OT-244ENST00000627738 DLG1Q12959 904 aa9.85□□□□□ -0.83
SOX2-OT-244ENST00000627738 CAMK2GQ13555 558 aaPredicted RBP9.85□□□□□ -0.83
SOX2-OT-244ENST00000627738 ACOX1Q15067 660 aa9.85□□□□□ -0.83
SOX2-OT-244ENST00000627738 CCDC153Q494R4 210 aa9.85□□□□□ -0.83
SOX2-OT-244ENST00000627738 GPR33Q49SQ1 333 aa9.85□□□□□ -0.83
SOX2-OT-244ENST00000627738 LYPLAL1Q5VWZ2 237 aa9.85□□□□□ -0.83
SOX2-OT-244ENST00000627738 SDE2Q6IQ49 451 aa9.85□□□□□ -0.83
SOX2-OT-244ENST00000627738 LIPIQ6XZB0 460 aa9.85□□□□□ -0.83
SOX2-OT-244ENST00000627738 CERS6Q6ZMG9 384 aa9.85□□□□□ -0.83
SOX2-OT-244ENST00000627738 Q6ZVL8 140 aa9.85□□□□□ -0.83
SOX2-OT-244ENST00000627738 TBC1D1Q86TI0 1168 aaPredicted RBP9.85□□□□□ -0.83
SOX2-OT-244ENST00000627738 PIM3Q86V86 326 aa9.85□□□□□ -0.83
SOX2-OT-244ENST00000627738 CACUL1Q86Y37 369 aa9.85□□□□□ -0.83
SOX2-OT-244ENST00000627738 LRRC34Q8IZ02 419 aa9.85□□□□□ -0.83
SOX2-OT-244ENST00000627738 CENPLQ8N0S6 344 aaPredicted RBP9.85□□□□□ -0.83
SOX2-OT-244ENST00000627738 SPATA6LQ8N4H0 392 aa9.85□□□□□ -0.83
SOX2-OT-244ENST00000627738 LRRC8CQ8TDW0 803 aa9.85□□□□□ -0.83
SOX2-OT-244ENST00000627738 FAM136AQ96C01 138 aa9.85□□□□□ -0.83
SOX2-OT-244ENST00000627738 NXNL1Q96CM4 212 aa9.85□□□□□ -0.83
SOX2-OT-244ENST00000627738 SCYL1Q96KG9 808 aa9.85□□□□□ -0.83
SOX2-OT-244ENST00000627738 BIRC8Q96P09 236 aa9.85□□□□□ -0.83
SOX2-OT-244ENST00000627738 TTC1Q99614 292 aa9.85□□□□□ -0.83
SOX2-OT-244ENST00000627738 WRAP53Q9BUR4 548 aaKnown RBP9.85□□□□□ -0.83
SOX2-OT-244ENST00000627738 MECRQ9BV79 373 aa9.85□□□□□ -0.83
SOX2-OT-244ENST00000627738 BOCQ9BWV1 1114 aa9.85□□□□□ -0.83
SOX2-OT-244ENST00000627738 SPATA16Q9BXB7 569 aa9.85□□□□□ -0.83
SOX2-OT-244ENST00000627738 HDAC8Q9BY41 377 aa9.85□□□□□ -0.83
SOX2-OT-244ENST00000627738 UNKQ9C0B0 810 aaKnown RBP9.85□□□□□ -0.83
SOX2-OT-244ENST00000627738 FAM107BQ9H098 131 aa9.85□□□□□ -0.83
SOX2-OT-244ENST00000627738 RSPH9Q9H1X1 276 aaPredicted RBP9.85□□□□□ -0.83
SOX2-OT-244ENST00000627738 TSPAN10Q9H1Z9 355 aaPredicted RBP9.85□□□□□ -0.83
SOX2-OT-244ENST00000627738 P2RY12Q9H244 342 aa9.85□□□□□ -0.83
SOX2-OT-244ENST00000627738 FAM83DQ9H4H8 585 aa9.85□□□□□ -0.83
SOX2-OT-244ENST00000627738 GPAMQ9HCL2 828 aa9.85□□□□□ -0.83
SOX2-OT-244ENST00000627738 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.85□□□□□ -0.83
SOX2-OT-244ENST00000627738 MTF2Q9Y483 593 aaPredicted RBP9.85□□□□□ -0.83
SOX2-OT-244ENST00000627738 EYSQ5T1H1 3165 aa9.85□□□□□ -0.83
SOX2-OT-244ENST00000627738 RGSL1A5PLK6 1076 aa9.84□□□□□ -0.83
SOX2-OT-244ENST00000627738 AGAP14A8MT82 685 aa9.84□□□□□ -0.83
SOX2-OT-244ENST00000627738 PSMD11O00231 422 aa9.84□□□□□ -0.83
SOX2-OT-244ENST00000627738 PRMT5O14744 637 aaPredicted RBP9.84□□□□□ -0.83
SOX2-OT-244ENST00000627738 MID1O15344 667 aa9.84□□□□□ -0.83
SOX2-OT-244ENST00000627738 RNASEH1O60930 286 aaKnown RBP9.84□□□□□ -0.83
SOX2-OT-244ENST00000627738 ADAM23O75077 832 aa9.84□□□□□ -0.83
SOX2-OT-244ENST00000627738 NIPSNAP2O75323 286 aa9.84□□□□□ -0.83
SOX2-OT-244ENST00000627738 KLHL2O95198 593 aa9.84□□□□□ -0.83
SOX2-OT-244ENST00000627738 KLF8O95600 359 aaPredicted RBP9.84□□□□□ -0.83
SOX2-OT-244ENST00000627738 ESR1P03372 595 aa9.84□□□□□ -0.83
SOX2-OT-244ENST00000627738 BPGMP07738 259 aa9.84□□□□□ -0.83
SOX2-OT-244ENST00000627738 BMP2P12643 396 aa9.84□□□□□ -0.83
SOX2-OT-244ENST00000627738 ZNF7P17097 686 aaPredicted RBP9.84□□□□□ -0.83
SOX2-OT-244ENST00000627738 GM2AP17900 193 aa9.84□□□□□ -0.83
SOX2-OT-244ENST00000627738 DRD4P21917 467 aa9.84□□□□□ -0.83
SOX2-OT-244ENST00000627738 RPS3P23396 243 aaKnown RBP eCLIP9.84□□□□□ -0.83
SOX2-OT-244ENST00000627738 P2RY2P41231 377 aa9.84□□□□□ -0.83
SOX2-OT-244ENST00000627738 GLRBP48167 497 aa9.84□□□□□ -0.83
SOX2-OT-244ENST00000627738 LIG3P49916 1009 aa9.84□□□□□ -0.83
SOX2-OT-244ENST00000627738 SUOXP51687 545 aa9.84□□□□□ -0.83
SOX2-OT-244ENST00000627738 ADARP55265 1226 aaKnown RBP9.84□□□□□ -0.83
SOX2-OT-244ENST00000627738 DCDC1P59894 354 aa9.84□□□□□ -0.83
SOX2-OT-244ENST00000627738 SATB1Q01826 763 aa9.84□□□□□ -0.83
SOX2-OT-244ENST00000627738 CNTN1Q12860 1018 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms