RNA–Protein interactions for RNA: ENST00000626948.2

SOX2-OT-241, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 836 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-241ENST00000626948 RFX6Q8HWS3 928 aa13.35□□□□□ -0.27
SOX2-OT-241ENST00000626948 GLYATL1Q969I3 302 aa13.35□□□□□ -0.27
SOX2-OT-241ENST00000626948 RTP4Q96DX8 246 aa13.35□□□□□ -0.27
SOX2-OT-241ENST00000626948 TEKT5Q96M29 485 aa13.35□□□□□ -0.27
SOX2-OT-241ENST00000626948 GORASP1Q9BQQ3 440 aa13.35□□□□□ -0.27
SOX2-OT-241ENST00000626948 HERPUD2Q9BSE4 406 aa13.35□□□□□ -0.27
SOX2-OT-241ENST00000626948 DDA1Q9BW61 102 aa13.35□□□□□ -0.27
SOX2-OT-241ENST00000626948 SPATA16Q9BXB7 569 aa13.35□□□□□ -0.27
SOX2-OT-241ENST00000626948 TRIM39Q9HCM9 518 aa13.35□□□□□ -0.27
SOX2-OT-241ENST00000626948 BPIFA1Q9NP55 256 aa13.35□□□□□ -0.27
SOX2-OT-241ENST00000626948 KLC4Q9NSK0 619 aa13.35□□□□□ -0.27
SOX2-OT-241ENST00000626948 STARD5Q9NSY2 213 aa13.35□□□□□ -0.27
SOX2-OT-241ENST00000626948 SIDT1Q9NXL6 827 aaKnown RBP13.35□□□□□ -0.27
SOX2-OT-241ENST00000626948 SLC39A1Q9NY26 324 aa13.35□□□□□ -0.27
SOX2-OT-241ENST00000626948 CPNE7Q9UBL6 633 aa13.35□□□□□ -0.27
SOX2-OT-241ENST00000626948 UBR5O95071 2799 aaPredicted RBP13.35□□□□□ -0.27
SOX2-OT-241ENST00000626948 LOC285095A0A1B0GVY8 99 aa13.34□□□□□ -0.27
SOX2-OT-241ENST00000626948 F5H423 210 aaPredicted RBP13.34□□□□□ -0.27
SOX2-OT-241ENST00000626948 GAPDHSO14556 408 aaPredicted RBP13.34□□□□□ -0.27
SOX2-OT-241ENST00000626948 PMPCBO75439 489 aa13.34□□□□□ -0.27
SOX2-OT-241ENST00000626948 SLC4A1P02730 911 aa13.34□□□□□ -0.27
SOX2-OT-241ENST00000626948 ITGB2P05107 769 aa13.34□□□□□ -0.27
SOX2-OT-241ENST00000626948 TNNT1P13805 278 aa13.34□□□□□ -0.27
SOX2-OT-241ENST00000626948 CA4P22748 312 aa13.34□□□□□ -0.27
SOX2-OT-241ENST00000626948 CSTF2P33240 577 aaKnown RBP eCLIP13.34□□□□□ -0.27
SOX2-OT-241ENST00000626948 MC2RQ01718 297 aa13.34□□□□□ -0.27
SOX2-OT-241ENST00000626948 NFATC3Q12968 1075 aa13.34□□□□□ -0.27
SOX2-OT-241ENST00000626948 TRIM14Q14142 442 aa13.34□□□□□ -0.27
SOX2-OT-241ENST00000626948 PDK1Q15118 436 aa13.34□□□□□ -0.27
SOX2-OT-241ENST00000626948 SLC14A2Q15849 920 aa13.34□□□□□ -0.27
SOX2-OT-241ENST00000626948 ATP13A5Q4VNC0 1218 aa13.34□□□□□ -0.27
SOX2-OT-241ENST00000626948 CRTC3Q6UUV7 619 aa13.34□□□□□ -0.27
SOX2-OT-241ENST00000626948 XKR5Q6UX68 686 aa13.34□□□□□ -0.27
SOX2-OT-241ENST00000626948 FAM129CQ86XR2 697 aa13.34□□□□□ -0.27
SOX2-OT-241ENST00000626948 RHOT2Q8IXI1 618 aa13.34□□□□□ -0.27
SOX2-OT-241ENST00000626948 TTC30BQ8N4P2 665 aa13.34□□□□□ -0.27
SOX2-OT-241ENST00000626948 TRAM1L1Q8N609 369 aa13.34□□□□□ -0.27
SOX2-OT-241ENST00000626948 RNF214Q8ND24 703 aa13.34□□□□□ -0.27
SOX2-OT-241ENST00000626948 CCHCR1Q8TD31 782 aa13.34□□□□□ -0.27
SOX2-OT-241ENST00000626948 NCSTNQ92542 709 aa13.34□□□□□ -0.27
SOX2-OT-241ENST00000626948 OXNAD1Q96HP4 312 aaPredicted RBP13.34□□□□□ -0.27
SOX2-OT-241ENST00000626948 ADGRE3Q9BY15 652 aa13.34□□□□□ -0.27
SOX2-OT-241ENST00000626948 DEF6Q9H4E7 631 aa13.34□□□□□ -0.27
SOX2-OT-241ENST00000626948 RMI1Q9H9A7 625 aa13.34□□□□□ -0.27
SOX2-OT-241ENST00000626948 LCMT1Q9UIC8 334 aa13.34□□□□□ -0.27
SOX2-OT-241ENST00000626948 LOC101059948A0A1B0GTJ6 334 aa13.33□□□□□ -0.28
SOX2-OT-241ENST00000626948 DUX1O43812 170 aa13.33□□□□□ -0.28
SOX2-OT-241ENST00000626948 RAD1O60671 282 aa13.33□□□□□ -0.28
SOX2-OT-241ENST00000626948 SLC25A14O95258 325 aaPredicted RBP13.33□□□□□ -0.28
SOX2-OT-241ENST00000626948 NDST3O95803 873 aa13.33□□□□□ -0.28
SOX2-OT-241ENST00000626948 C9P02748 559 aa13.33□□□□□ -0.28
SOX2-OT-241ENST00000626948 XRCC1P18887 633 aaPredicted RBP13.33□□□□□ -0.28
SOX2-OT-241ENST00000626948 NFKB1P19838 968 aa13.33□□□□□ -0.28
SOX2-OT-241ENST00000626948 BIRC2Q13490 618 aa13.33□□□□□ -0.28
SOX2-OT-241ENST00000626948 PEX6Q13608 980 aa13.33□□□□□ -0.28
SOX2-OT-241ENST00000626948 ZNF569Q5MCW4 686 aa13.33□□□□□ -0.28
SOX2-OT-241ENST00000626948 TMEM164Q5U3C3 297 aa13.33□□□□□ -0.28
SOX2-OT-241ENST00000626948 MICALCLQ6ZW33 695 aa13.33□□□□□ -0.28
SOX2-OT-241ENST00000626948 RHOT1Q8IXI2 618 aa13.33□□□□□ -0.28
SOX2-OT-241ENST00000626948 UNC5BQ8IZJ1 945 aa13.33□□□□□ -0.28
SOX2-OT-241ENST00000626948 TC2NQ8N9U0 490 aa13.33□□□□□ -0.28
SOX2-OT-241ENST00000626948 OR10G6Q8NH81 332 aa13.33□□□□□ -0.28
SOX2-OT-241ENST00000626948 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.33□□□□□ -0.28
SOX2-OT-241ENST00000626948 MRGPRX2Q96LB1 330 aa13.33□□□□□ -0.28
SOX2-OT-241ENST00000626948 CCDC42Q96M95 316 aa13.33□□□□□ -0.28
SOX2-OT-241ENST00000626948 ZNF830Q96NB3 372 aaPredicted RBP13.33□□□□□ -0.28
SOX2-OT-241ENST00000626948 DPYSL5Q9BPU6 564 aa13.33□□□□□ -0.28
SOX2-OT-241ENST00000626948 ZSCAN5AQ9BUG6 496 aa13.33□□□□□ -0.28
SOX2-OT-241ENST00000626948 C10orf88Q9H8K7 445 aa13.33□□□□□ -0.28
SOX2-OT-241ENST00000626948 AKAP7Q9P0M2 348 aaPredicted RBP13.33□□□□□ -0.28
SOX2-OT-241ENST00000626948 KLHL3Q9UH77 587 aa13.33□□□□□ -0.28
SOX2-OT-241ENST00000626948 WDR37Q9Y2I8 494 aa13.33□□□□□ -0.28
SOX2-OT-241ENST00000626948 PCDHB11Q9Y5F2 797 aa13.33□□□□□ -0.28
SOX2-OT-241ENST00000626948 ALG6Q9Y672 507 aa13.33□□□□□ -0.28
SOX2-OT-241ENST00000626948 MN1Q10571 1320 aaPredicted RBP13.33□□□□□ -0.28
SOX2-OT-241ENST00000626948 A0A0A6YYK5 440 aaPredicted RBP13.32□□□□□ -0.28
SOX2-OT-241ENST00000626948 KIR2DS5A0A0G2JLQ3 304 aa13.32□□□□□ -0.28
SOX2-OT-241ENST00000626948 A0A0G2JNG1 304 aa13.32□□□□□ -0.28
SOX2-OT-241ENST00000626948 LILRA5A6NI73 299 aa13.32□□□□□ -0.28
SOX2-OT-241ENST00000626948 OR52A4PA6NMU1 304 aa13.32□□□□□ -0.28
SOX2-OT-241ENST00000626948 KIR2DS3K7RE56 304 aa13.32□□□□□ -0.28
SOX2-OT-241ENST00000626948 KIF1CO43896 1103 aaKnown RBP13.32□□□□□ -0.28
SOX2-OT-241ENST00000626948 CST8O60676 142 aa13.32□□□□□ -0.28
SOX2-OT-241ENST00000626948 DLGAP3O95886 979 aa13.32□□□□□ -0.28
SOX2-OT-241ENST00000626948 ZNF28P17035 718 aa13.32□□□□□ -0.28
SOX2-OT-241ENST00000626948 ZNF7P17097 686 aaPredicted RBP13.32□□□□□ -0.28
SOX2-OT-241ENST00000626948 RPL10P27635 214 aaKnown RBP13.32□□□□□ -0.28
SOX2-OT-241ENST00000626948 MAPK9P45984 424 aa13.32□□□□□ -0.28
SOX2-OT-241ENST00000626948 LEPRP48357 1165 aaKnown RBP13.32□□□□□ -0.28
SOX2-OT-241ENST00000626948 EPHA4P54764 986 aa13.32□□□□□ -0.28
SOX2-OT-241ENST00000626948 PTPRCAPQ14761 206 aa13.32□□□□□ -0.28
SOX2-OT-241ENST00000626948 KIR2DS5Q14953 304 aa13.32□□□□□ -0.28
SOX2-OT-241ENST00000626948 SEPT7Q16181 437 aaKnown RBP13.32□□□□□ -0.28
SOX2-OT-241ENST00000626948 SIRPB2Q5JXA9 342 aa13.32□□□□□ -0.28
SOX2-OT-241ENST00000626948 SPOCD1Q6ZMY3 1216 aa13.32□□□□□ -0.28
SOX2-OT-241ENST00000626948 SLC9B2Q86UD5 537 aa13.32□□□□□ -0.28
SOX2-OT-241ENST00000626948 CACNA2D3Q8IZS8 1091 aa13.32□□□□□ -0.28
SOX2-OT-241ENST00000626948 ZNF567Q8N184 647 aa13.32□□□□□ -0.28
SOX2-OT-241ENST00000626948 NAT14Q8WUY8 206 aa13.32□□□□□ -0.28
SOX2-OT-241ENST00000626948 KRT35Q92764 455 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms