RNA–Protein interactions for RNA: ENST00000624688.2

C3orf56-201, Transcript of chromosome 3 open reading frame 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C3orf56, Length 1,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56-201ENST00000624688 HK3P52790 923 aa13.1□□□□□ -0.31
C3orf56-201ENST00000624688 CDH13P55290 713 aa13.1□□□□□ -0.31
C3orf56-201ENST00000624688 KLF10Q13118 480 aa13.1□□□□□ -0.31
C3orf56-201ENST00000624688 GAB4Q2WGN9 574 aa13.1□□□□□ -0.31
C3orf56-201ENST00000624688 GPR33Q49SQ1 333 aa13.1□□□□□ -0.31
C3orf56-201ENST00000624688 LYPLAL1Q5VWZ2 237 aa13.1□□□□□ -0.31
C3orf56-201ENST00000624688 UGT3A1Q6NUS8 523 aa13.1□□□□□ -0.31
C3orf56-201ENST00000624688 ACAD11Q709F0 780 aa13.1□□□□□ -0.31
C3orf56-201ENST00000624688 CPSF7Q8N684 471 aaKnown RBP13.1□□□□□ -0.31
C3orf56-201ENST00000624688 POU5F2Q8N7G0 328 aa13.1□□□□□ -0.31
C3orf56-201ENST00000624688 GDPD5Q8WTR4 605 aa13.1□□□□□ -0.31
C3orf56-201ENST00000624688 FAR2Q96K12 515 aa13.1□□□□□ -0.31
C3orf56-201ENST00000624688 ASB16Q96NS5 453 aa13.1□□□□□ -0.31
C3orf56-201ENST00000624688 NSUN5Q96P11 429 aaKnown RBP13.1□□□□□ -0.31
C3orf56-201ENST00000624688 HEPHQ9BQS7 1158 aa13.1□□□□□ -0.31
C3orf56-201ENST00000624688 CLPBQ9H078 707 aa13.1□□□□□ -0.31
C3orf56-201ENST00000624688 MTG2Q9H4K7 406 aa13.1□□□□□ -0.31
C3orf56-201ENST00000624688 SFXN1Q9H9B4 322 aa13.1□□□□□ -0.31
C3orf56-201ENST00000624688 SARS2Q9NP81 518 aaKnown RBP13.1□□□□□ -0.31
C3orf56-201ENST00000624688 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.1□□□□□ -0.31
C3orf56-201ENST00000624688 B4GALT6Q9UBX8 382 aa13.1□□□□□ -0.31
C3orf56-201ENST00000624688 CHD7Q9P2D1 2997 aa13.1□□□□□ -0.31
C3orf56-201ENST00000624688 A0A1W2PQ67 120 aa13.1□□□□□ -0.31
C3orf56-201ENST00000624688 TSPAN11A1L157 253 aa13.1□□□□□ -0.31
C3orf56-201ENST00000624688 PPP6CO00743 305 aa13.1□□□□□ -0.31
C3orf56-201ENST00000624688 WFS1O76024 890 aa13.1□□□□□ -0.31
C3orf56-201ENST00000624688 CTSLP07711 333 aa13.1□□□□□ -0.31
C3orf56-201ENST00000624688 GFAPP14136 432 aa13.1□□□□□ -0.31
C3orf56-201ENST00000624688 PRDX6P30041 224 aa13.1□□□□□ -0.31
C3orf56-201ENST00000624688 CPOXP36551 454 aa13.1□□□□□ -0.31
C3orf56-201ENST00000624688 PPARGP37231 505 aaPredicted RBP13.1□□□□□ -0.31
C3orf56-201ENST00000624688 SH3BP2P78314 561 aa13.1□□□□□ -0.31
C3orf56-201ENST00000624688 MESP2Q0VG99 397 aa13.1□□□□□ -0.31
C3orf56-201ENST00000624688 UGT3A2Q3SY77 523 aa13.1□□□□□ -0.31
C3orf56-201ENST00000624688 TMEM198Q66K66 360 aa13.1□□□□□ -0.31
C3orf56-201ENST00000624688 PTRHD1Q6GMV3 140 aaKnown RBP13.1□□□□□ -0.31
C3orf56-201ENST00000624688 CYHR1Q6ZMK1 362 aa13.1□□□□□ -0.31
C3orf56-201ENST00000624688 RAB44Q7Z6P3 723 aaPredicted RBP13.1□□□□□ -0.31
C3orf56-201ENST00000624688 ETFBKMTQ8IXQ9 262 aa13.1□□□□□ -0.31
C3orf56-201ENST00000624688 NXPE1Q8N323 547 aa13.1□□□□□ -0.31
C3orf56-201ENST00000624688 FBXO39Q8N4B4 442 aa13.1□□□□□ -0.31
C3orf56-201ENST00000624688 CLDN19Q8N6F1 224 aa13.1□□□□□ -0.31
C3orf56-201ENST00000624688 FGF13Q92913 245 aa13.1□□□□□ -0.31
C3orf56-201ENST00000624688 PDLIM5Q96HC4 596 aaKnown RBP13.1□□□□□ -0.31
C3orf56-201ENST00000624688 ZFYVE19Q96K21 471 aa13.1□□□□□ -0.31
C3orf56-201ENST00000624688 PBX4Q9BYU1 374 aa13.1□□□□□ -0.31
C3orf56-201ENST00000624688 CIPCQ9C0C6 399 aa13.1□□□□□ -0.31
C3orf56-201ENST00000624688 C1orf21Q9H246 121 aa13.1□□□□□ -0.31
C3orf56-201ENST00000624688 NKX2-4Q9H2Z4 354 aa13.1□□□□□ -0.31
C3orf56-201ENST00000624688 MEAF6Q9HAF1 191 aa13.1□□□□□ -0.31
C3orf56-201ENST00000624688 CDH22Q9UJ99 828 aa13.1□□□□□ -0.31
C3orf56-201ENST00000624688 CRLS1Q9UJA2 301 aa13.1□□□□□ -0.31
C3orf56-201ENST00000624688 GNPTGQ9UJJ9 305 aa13.1□□□□□ -0.31
C3orf56-201ENST00000624688 SLC27A6Q9Y2P4 619 aa13.1□□□□□ -0.31
C3orf56-201ENST00000624688 FIS1Q9Y3D6 152 aa13.1□□□□□ -0.31
C3orf56-201ENST00000624688 TRAF6Q9Y4K3 522 aa13.1□□□□□ -0.31
C3orf56-201ENST00000624688 OTOL1A6NHN0 477 aaPredicted RBP13.09□□□□□ -0.31
C3orf56-201ENST00000624688 SYCE1LA8MT33 242 aa13.09□□□□□ -0.31
C3orf56-201ENST00000624688 MEI4A8MW99 385 aa13.09□□□□□ -0.31
C3orf56-201ENST00000624688 TULP3O75386 442 aa13.09□□□□□ -0.31
C3orf56-201ENST00000624688 SKAP2O75563 359 aaPredicted RBP13.09□□□□□ -0.31
C3orf56-201ENST00000624688 LEFTY1O75610 366 aa13.09□□□□□ -0.31
C3orf56-201ENST00000624688 CDK14O94921 469 aa13.09□□□□□ -0.31
C3orf56-201ENST00000624688 ADH1CP00326 375 aa13.09□□□□□ -0.31
C3orf56-201ENST00000624688 SRPRAP08240 638 aaKnown RBP13.09□□□□□ -0.31
C3orf56-201ENST00000624688 GM2AP17900 193 aa13.09□□□□□ -0.31
C3orf56-201ENST00000624688 FSHRP23945 695 aa13.09□□□□□ -0.31
C3orf56-201ENST00000624688 EEF1DP29692 281 aaKnown RBP13.09□□□□□ -0.31
C3orf56-201ENST00000624688 RECQLP46063 649 aaPredicted RBP13.09□□□□□ -0.31
C3orf56-201ENST00000624688 INHBCP55103 352 aa13.09□□□□□ -0.31
C3orf56-201ENST00000624688 SATB1Q01826 763 aa13.09□□□□□ -0.31
C3orf56-201ENST00000624688 ARSIQ5FYB1 569 aa13.09□□□□□ -0.31
C3orf56-201ENST00000624688 CLEC6AQ6EIG7 209 aa13.09□□□□□ -0.31
C3orf56-201ENST00000624688 BRAT1Q6PJG6 821 aa13.09□□□□□ -0.31
C3orf56-201ENST00000624688 MACC1Q6ZN28 852 aa13.09□□□□□ -0.31
C3orf56-201ENST00000624688 ST13P5Q8NFI4 369 aaPredicted RBP13.09□□□□□ -0.31
C3orf56-201ENST00000624688 BPIFB1Q8TDL5 484 aa13.09□□□□□ -0.31
C3orf56-201ENST00000624688 TTC1Q99614 292 aa13.09□□□□□ -0.31
C3orf56-201ENST00000624688 C1QTNF3Q9BXJ4 246 aa13.09□□□□□ -0.31
C3orf56-201ENST00000624688 LMAN2LQ9H0V9 348 aa13.09□□□□□ -0.31
C3orf56-201ENST00000624688 MMADHCQ9H3L0 296 aaPredicted RBP13.09□□□□□ -0.31
C3orf56-201ENST00000624688 DENND2DQ9H6A0 471 aaPredicted RBP13.09□□□□□ -0.31
C3orf56-201ENST00000624688 TMPRSS11EQ9UL52 423 aa13.09□□□□□ -0.31
C3orf56-201ENST00000624688 KIF26AQ9ULI4 1882 aaPredicted RBP13.08□□□□□ -0.32
C3orf56-201ENST00000624688 GOLGA8CPA6NN73 597 aa13.08□□□□□ -0.32
C3orf56-201ENST00000624688 STX16-NPEPL1H3BU86 382 aa13.08□□□□□ -0.32
C3orf56-201ENST00000624688 STX16O14662 325 aa13.08□□□□□ -0.32
C3orf56-201ENST00000624688 MAGEC1O60732 1142 aa13.08□□□□□ -0.32
C3orf56-201ENST00000624688 ASLP04424 464 aa13.08□□□□□ -0.32
C3orf56-201ENST00000624688 RPS17P08708 135 aaKnown RBP13.08□□□□□ -0.32
C3orf56-201ENST00000624688 COX4I1P13073 169 aa13.08□□□□□ -0.32
C3orf56-201ENST00000624688 TIMP2P16035 220 aa13.08□□□□□ -0.32
C3orf56-201ENST00000624688 ITGB6P18564 788 aa13.08□□□□□ -0.32
C3orf56-201ENST00000624688 SLC6A11P48066 632 aa13.08□□□□□ -0.32
C3orf56-201ENST00000624688 SPINT3P49223 89 aa13.08□□□□□ -0.32
C3orf56-201ENST00000624688 COPAP53621 1224 aa13.08□□□□□ -0.32
C3orf56-201ENST00000624688 POLR2LP62875 67 aaKnown RBP13.08□□□□□ -0.32
C3orf56-201ENST00000624688 ATP13A5Q4VNC0 1218 aa13.08□□□□□ -0.32
C3orf56-201ENST00000624688 FBXO48Q5FWF7 155 aa13.08□□□□□ -0.32
C3orf56-201ENST00000624688 RARS2Q5T160 578 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms