RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 UQCRHLA0A096LP55 91 aa19.65■□□□□ 0.74
PDLIM2-221ENST00000622702 A6NNZ2 444 aa19.65■□□□□ 0.74
PDLIM2-221ENST00000622702 GDF9O60383 454 aa19.65■□□□□ 0.74
PDLIM2-221ENST00000622702 UQCRHP07919 91 aa19.65■□□□□ 0.74
PDLIM2-221ENST00000622702 ENGP17813 658 aa19.65■□□□□ 0.74
PDLIM2-221ENST00000622702 TTPAP49638 278 aa19.65■□□□□ 0.74
PDLIM2-221ENST00000622702 CSNK1EP49674 416 aaKnown RBP19.65■□□□□ 0.74
PDLIM2-221ENST00000622702 YPEL5P62699 121 aa19.65■□□□□ 0.74
PDLIM2-221ENST00000622702 RACK1P63244 317 aaKnown RBP19.65■□□□□ 0.74
PDLIM2-221ENST00000622702 CDK3Q00526 305 aa19.65■□□□□ 0.74
PDLIM2-221ENST00000622702 SEMA3AQ14563 771 aa19.65■□□□□ 0.74
PDLIM2-221ENST00000622702 SMAD1Q15797 465 aaKnown RBP19.65■□□□□ 0.74
PDLIM2-221ENST00000622702 UAP1Q16222 522 aaPredicted RBP19.65■□□□□ 0.74
PDLIM2-221ENST00000622702 GPRC6AQ5T6X5 926 aa19.65■□□□□ 0.74
PDLIM2-221ENST00000622702 LYPLAL1Q5VWZ2 237 aa19.65■□□□□ 0.74
PDLIM2-221ENST00000622702 ZNF470Q6ECI4 717 aa19.65■□□□□ 0.74
PDLIM2-221ENST00000622702 KIAA0408Q6ZU52 694 aa19.65■□□□□ 0.74
PDLIM2-221ENST00000622702 TAS2R42Q7RTR8 314 aa19.65■□□□□ 0.74
PDLIM2-221ENST00000622702 SDCCAG8Q86SQ7 713 aaPredicted RBP19.65■□□□□ 0.74
PDLIM2-221ENST00000622702 SERPINA9Q86WD7 417 aa19.65■□□□□ 0.74
PDLIM2-221ENST00000622702 PHYKPLQ8IUZ5 450 aa19.65■□□□□ 0.74
PDLIM2-221ENST00000622702 DDHD1Q8NEL9 900 aa19.65■□□□□ 0.74
PDLIM2-221ENST00000622702 CDKL2Q92772 493 aa19.65■□□□□ 0.74
PDLIM2-221ENST00000622702 HIC2Q96JB3 615 aa19.65■□□□□ 0.74
PDLIM2-221ENST00000622702 TTC1Q99614 292 aa19.65■□□□□ 0.74
PDLIM2-221ENST00000622702 APOOQ9BUR5 198 aa19.65■□□□□ 0.74
PDLIM2-221ENST00000622702 ACSS3Q9H6R3 686 aa19.65■□□□□ 0.74
PDLIM2-221ENST00000622702 SMYD2Q9NRG4 433 aa19.65■□□□□ 0.74
PDLIM2-221ENST00000622702 AASDHPPTQ9NRN7 309 aa19.65■□□□□ 0.74
PDLIM2-221ENST00000622702 PHPT1Q9NRX4 125 aaPredicted RBP19.65■□□□□ 0.74
PDLIM2-221ENST00000622702 IARS2Q9NSE4 1012 aaKnown RBP19.65■□□□□ 0.74
PDLIM2-221ENST00000622702 ZFATQ9P243 1243 aa19.65■□□□□ 0.74
PDLIM2-221ENST00000622702 RABGEF1Q9UJ41 708 aa19.65■□□□□ 0.74
PDLIM2-221ENST00000622702 IGLV3-16A0A075B6K0 115 aa19.64■□□□□ 0.73
PDLIM2-221ENST00000622702 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.64■□□□□ 0.73
PDLIM2-221ENST00000622702 H0Y8X5 98 aa19.64■□□□□ 0.73
PDLIM2-221ENST00000622702 INPP4BO15327 924 aa19.64■□□□□ 0.73
PDLIM2-221ENST00000622702 H2AFXP16104 143 aaPredicted RBP19.64■□□□□ 0.73
PDLIM2-221ENST00000622702 ACRV1P26436 265 aa19.64■□□□□ 0.73
PDLIM2-221ENST00000622702 HSD17B3P37058 310 aa19.64■□□□□ 0.73
PDLIM2-221ENST00000622702 PPARGP37231 505 aaPredicted RBP19.64■□□□□ 0.73
PDLIM2-221ENST00000622702 RABIFP47224 123 aa19.64■□□□□ 0.73
PDLIM2-221ENST00000622702 SLC29A2Q14542 456 aa19.64■□□□□ 0.73
PDLIM2-221ENST00000622702 ITIH4Q14624 930 aa19.64■□□□□ 0.73
PDLIM2-221ENST00000622702 DBN1Q16643 649 aa19.64■□□□□ 0.73
PDLIM2-221ENST00000622702 LDLRAP1Q5SW96 308 aa19.64■□□□□ 0.73
PDLIM2-221ENST00000622702 BEND6Q5SZJ8 279 aaPredicted RBP19.64■□□□□ 0.73
PDLIM2-221ENST00000622702 KDM7AQ6ZMT4 941 aa19.64■□□□□ 0.73
PDLIM2-221ENST00000622702 GALNT7Q86SF2 657 aa19.64■□□□□ 0.73
PDLIM2-221ENST00000622702 IQCHQ86VS3 1027 aa19.64■□□□□ 0.73
PDLIM2-221ENST00000622702 OTUD6BQ8N6M0 293 aa19.64■□□□□ 0.73
PDLIM2-221ENST00000622702 UBLCP1Q8WVY7 318 aaPredicted RBP19.64■□□□□ 0.73
PDLIM2-221ENST00000622702 FUBP1Q96AE4 644 aaKnown RBP19.64■□□□□ 0.73
PDLIM2-221ENST00000622702 CYTH2Q99418 400 aa19.64■□□□□ 0.73
PDLIM2-221ENST00000622702 EDEM2Q9BV94 578 aa19.64■□□□□ 0.73
PDLIM2-221ENST00000622702 ZDHHC3Q9NYG2 299 aa19.64■□□□□ 0.73
PDLIM2-221ENST00000622702 FBXO5Q9UKT4 447 aa19.64■□□□□ 0.73
PDLIM2-221ENST00000622702 OR1A2Q9Y585 309 aa19.64■□□□□ 0.73
PDLIM2-221ENST00000622702 PLXNB3Q9ULL4 1909 aa19.64■□□□□ 0.73
PDLIM2-221ENST00000622702 PCDH15Q96QU1 1955 aa19.63■□□□□ 0.73
PDLIM2-221ENST00000622702 A0A1W2PR77 199 aa19.63■□□□□ 0.73
PDLIM2-221ENST00000622702 ARHGAP33O14559 1287 aa19.63■□□□□ 0.73
PDLIM2-221ENST00000622702 SLC25A14O95258 325 aaPredicted RBP19.63■□□□□ 0.73
PDLIM2-221ENST00000622702 SYPP08247 313 aa19.63■□□□□ 0.73
PDLIM2-221ENST00000622702 MYCLP1P12525 358 aaPredicted RBP19.63■□□□□ 0.73
PDLIM2-221ENST00000622702 SLC1A2P43004 574 aa19.63■□□□□ 0.73
PDLIM2-221ENST00000622702 KIAA1024LP59773 190 aa19.63■□□□□ 0.73
PDLIM2-221ENST00000622702 OVGP1Q12889 678 aa19.63■□□□□ 0.73
PDLIM2-221ENST00000622702 NAB1Q13506 487 aa19.63■□□□□ 0.73
PDLIM2-221ENST00000622702 TEAD4Q15561 434 aa19.63■□□□□ 0.73
PDLIM2-221ENST00000622702 KBTBD12Q3ZCT8 623 aa19.63■□□□□ 0.73
PDLIM2-221ENST00000622702 RNF187Q5TA31 235 aaPredicted RBP19.63■□□□□ 0.73
PDLIM2-221ENST00000622702 LAYNQ6UX15 382 aa19.63■□□□□ 0.73
PDLIM2-221ENST00000622702 DENND6AQ8IWF6 608 aa19.63■□□□□ 0.73
PDLIM2-221ENST00000622702 MFSD2AQ8NA29 543 aa19.63■□□□□ 0.73
PDLIM2-221ENST00000622702 C2CD4AQ8NCU7 369 aaPredicted RBP19.63■□□□□ 0.73
PDLIM2-221ENST00000622702 HEXDCQ8WVB3 486 aa19.63■□□□□ 0.73
PDLIM2-221ENST00000622702 COPS8Q99627 209 aa19.63■□□□□ 0.73
PDLIM2-221ENST00000622702 GTPBP2Q9BX10 602 aaKnown RBP19.63■□□□□ 0.73
PDLIM2-221ENST00000622702 GPR27Q9NS67 375 aa19.63■□□□□ 0.73
PDLIM2-221ENST00000622702 INTS10Q9NVR2 710 aaKnown RBP19.63■□□□□ 0.73
PDLIM2-221ENST00000622702 ARGLU1Q9NWB6 273 aaPredicted RBP19.63■□□□□ 0.73
PDLIM2-221ENST00000622702 NSMCE4AQ9NXX6 385 aa19.63■□□□□ 0.73
PDLIM2-221ENST00000622702 A0A1B0GVT2 93 aa19.62■□□□□ 0.73
PDLIM2-221ENST00000622702 CXorf49A8MYA2 514 aaPredicted RBP19.62■□□□□ 0.73
PDLIM2-221ENST00000622702 CACNB4O00305 520 aaPredicted RBP19.62■□□□□ 0.73
PDLIM2-221ENST00000622702 PFDN6O15212 129 aa19.62■□□□□ 0.73
PDLIM2-221ENST00000622702 CD38P28907 300 aa19.62■□□□□ 0.73
PDLIM2-221ENST00000622702 PMLP29590 882 aa19.62■□□□□ 0.73
PDLIM2-221ENST00000622702 ARHGAP8P85298 464 aa19.62■□□□□ 0.73
PDLIM2-221ENST00000622702 GRIK2Q13002 908 aa19.62■□□□□ 0.73
PDLIM2-221ENST00000622702 CTBP1Q13363 440 aa19.62■□□□□ 0.73
PDLIM2-221ENST00000622702 Q6ZSR6 202 aa19.62■□□□□ 0.73
PDLIM2-221ENST00000622702 MARK2Q7KZI7 788 aaKnown RBP19.62■□□□□ 0.73
PDLIM2-221ENST00000622702 LDB1Q86U70 411 aaPredicted RBP19.62■□□□□ 0.73
PDLIM2-221ENST00000622702 SLC26A11Q86WA9 606 aa19.62■□□□□ 0.73
PDLIM2-221ENST00000622702 PNPLA1Q8N8W4 532 aa19.62■□□□□ 0.73
PDLIM2-221ENST00000622702 LGR4Q9BXB1 951 aa19.62■□□□□ 0.73
PDLIM2-221ENST00000622702 TRIM39Q9HCM9 518 aa19.62■□□□□ 0.73
PDLIM2-221ENST00000622702 VPS9D1Q9Y2B5 631 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms