RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 ZNF549Q6P9A3 640 aa17.64■□□□□ 0.41
PTCHD3-202ENST00000622555 PHYKPLQ8IUZ5 450 aa17.64■□□□□ 0.41
PTCHD3-202ENST00000622555 SLC41A1Q8IVJ1 513 aa17.64■□□□□ 0.41
PTCHD3-202ENST00000622555 DDHD1Q8NEL9 900 aa17.64■□□□□ 0.41
PTCHD3-202ENST00000622555 ASB12Q8WXK4 309 aa17.64■□□□□ 0.41
PTCHD3-202ENST00000622555 DCUN1D1Q96GG9 259 aa17.64■□□□□ 0.41
PTCHD3-202ENST00000622555 SERAC1Q96JX3 654 aa17.64■□□□□ 0.41
PTCHD3-202ENST00000622555 KLF6Q99612 283 aaPredicted RBP17.64■□□□□ 0.41
PTCHD3-202ENST00000622555 CAB39LQ9H9S4 337 aa17.64■□□□□ 0.41
PTCHD3-202ENST00000622555 MBNL1Q9NR56 388 aaKnown RBP17.64■□□□□ 0.41
PTCHD3-202ENST00000622555 INVSQ9Y283 1065 aa17.64■□□□□ 0.41
PTCHD3-202ENST00000622555 ZDBF2Q9HCK1 2354 aa17.64■□□□□ 0.41
PTCHD3-202ENST00000622555 TPP1O14773 563 aa17.64■□□□□ 0.41
PTCHD3-202ENST00000622555 RAD51BO15315 384 aa17.64■□□□□ 0.41
PTCHD3-202ENST00000622555 MTX2O75431 263 aa17.64■□□□□ 0.41
PTCHD3-202ENST00000622555 FSBPO95073 299 aa17.64■□□□□ 0.41
PTCHD3-202ENST00000622555 ALDOAP04075 364 aaKnown RBP17.64■□□□□ 0.41
PTCHD3-202ENST00000622555 SERPINB8P50452 374 aa17.64■□□□□ 0.41
PTCHD3-202ENST00000622555 HECTD2Q5U5R9 776 aa17.64■□□□□ 0.41
PTCHD3-202ENST00000622555 KIAA0895LQ68EN5 471 aa17.64■□□□□ 0.41
PTCHD3-202ENST00000622555 ADAMTSL4Q6UY14 1074 aa17.64■□□□□ 0.41
PTCHD3-202ENST00000622555 TIFABQ6ZNK6 161 aa17.64■□□□□ 0.41
PTCHD3-202ENST00000622555 CENPTQ96BT3 561 aa17.64■□□□□ 0.41
PTCHD3-202ENST00000622555 BIRC8Q96P09 236 aa17.64■□□□□ 0.41
PTCHD3-202ENST00000622555 LENG8Q96PV6 779 aaPredicted RBP17.64■□□□□ 0.41
PTCHD3-202ENST00000622555 MYOCQ99972 504 aa17.64■□□□□ 0.41
PTCHD3-202ENST00000622555 AARSD1Q9BTE6 412 aaKnown RBP17.64■□□□□ 0.41
PTCHD3-202ENST00000622555 P2RY12Q9H244 342 aa17.64■□□□□ 0.41
PTCHD3-202ENST00000622555 FZD3Q9NPG1 666 aa17.64■□□□□ 0.41
PTCHD3-202ENST00000622555 CNOT6Q9ULM6 557 aaKnown RBP17.64■□□□□ 0.41
PTCHD3-202ENST00000622555 IGLV3-16A0A075B6K0 115 aa17.63■□□□□ 0.41
PTCHD3-202ENST00000622555 CFAP99D6REC4 459 aa17.63■□□□□ 0.41
PTCHD3-202ENST00000622555 GOLGA8RI6L899 631 aa17.63■□□□□ 0.41
PTCHD3-202ENST00000622555 NDUFS2O75306 463 aa17.63■□□□□ 0.41
PTCHD3-202ENST00000622555 ESR1P03372 595 aa17.63■□□□□ 0.41
PTCHD3-202ENST00000622555 RALBP11234 206 aa17.63■□□□□ 0.41
PTCHD3-202ENST00000622555 PKMP14618 531 aaKnown RBP17.63■□□□□ 0.41
PTCHD3-202ENST00000622555 MSH3P20585 1137 aa17.63■□□□□ 0.41
PTCHD3-202ENST00000622555 RPS3P23396 243 aaKnown RBP eCLIP17.63■□□□□ 0.41
PTCHD3-202ENST00000622555 TYK2P29597 1187 aa17.63■□□□□ 0.41
PTCHD3-202ENST00000622555 NSG1P42857 185 aa17.63■□□□□ 0.41
PTCHD3-202ENST00000622555 POLD2P49005 469 aa17.63■□□□□ 0.41
PTCHD3-202ENST00000622555 SLC12A2P55011 1212 aa17.63■□□□□ 0.41
PTCHD3-202ENST00000622555 ADARP55265 1226 aaKnown RBP17.63■□□□□ 0.41
PTCHD3-202ENST00000622555 B4GALNT1Q00973 533 aa17.63■□□□□ 0.41
PTCHD3-202ENST00000622555 POU4F1Q01851 419 aa17.63■□□□□ 0.41
PTCHD3-202ENST00000622555 INPP5AQ14642 412 aa17.63■□□□□ 0.41
PTCHD3-202ENST00000622555 CTSL3PQ5NE16 218 aa17.63■□□□□ 0.41
PTCHD3-202ENST00000622555 ZNF648Q5T619 568 aaPredicted RBP17.63■□□□□ 0.41
PTCHD3-202ENST00000622555 FAM45BPQ6NSW5 357 aa17.63■□□□□ 0.41
PTCHD3-202ENST00000622555 CMC1Q7Z7K0 106 aa17.63■□□□□ 0.41
PTCHD3-202ENST00000622555 TRIM74Q86UV6 250 aa17.63■□□□□ 0.41
PTCHD3-202ENST00000622555 EXOC3L1Q86VI1 746 aa17.63■□□□□ 0.41
PTCHD3-202ENST00000622555 FAM45AQ8TCE6 357 aa17.63■□□□□ 0.41
PTCHD3-202ENST00000622555 NAT14Q8WUY8 206 aa17.63■□□□□ 0.41
PTCHD3-202ENST00000622555 HIC2Q96JB3 615 aa17.63■□□□□ 0.41
PTCHD3-202ENST00000622555 SPACA7Q96KW9 195 aa17.63■□□□□ 0.41
PTCHD3-202ENST00000622555 SNX15Q9NRS6 342 aa17.63■□□□□ 0.41
PTCHD3-202ENST00000622555 SENP1Q9P0U3 644 aa17.63■□□□□ 0.41
PTCHD3-202ENST00000622555 GNPTGQ9UJJ9 305 aa17.63■□□□□ 0.41
PTCHD3-202ENST00000622555 VWA7Q9Y334 891 aa17.63■□□□□ 0.41
PTCHD3-202ENST00000622555 PCDHB1Q9Y5F3 818 aa17.63■□□□□ 0.41
PTCHD3-202ENST00000622555 PRSS21Q9Y6M0 314 aa17.63■□□□□ 0.41
PTCHD3-202ENST00000622555 CEP192Q8TEP8 1941 aa17.62■□□□□ 0.41
PTCHD3-202ENST00000622555 LAMTOR5O43504 91 aa17.62■□□□□ 0.41
PTCHD3-202ENST00000622555 LATO43561 262 aa17.62■□□□□ 0.41
PTCHD3-202ENST00000622555 RFPL1O75677 317 aa17.62■□□□□ 0.41
PTCHD3-202ENST00000622555 PYGBP11216 843 aa17.62■□□□□ 0.41
PTCHD3-202ENST00000622555 KRT4P19013 534 aa17.62■□□□□ 0.41
PTCHD3-202ENST00000622555 IGFALSP35858 605 aa17.62■□□□□ 0.41
PTCHD3-202ENST00000622555 CCR5P51681 352 aa17.62■□□□□ 0.41
PTCHD3-202ENST00000622555 TAS2R39P59534 338 aa17.62■□□□□ 0.41
PTCHD3-202ENST00000622555 DMWDQ09019 674 aa17.62■□□□□ 0.41
PTCHD3-202ENST00000622555 KHDC1Q4VXA5 237 aaKnown RBP17.62■□□□□ 0.41
PTCHD3-202ENST00000622555 PTRHD1Q6GMV3 140 aaKnown RBP17.62■□□□□ 0.41
PTCHD3-202ENST00000622555 TSSK4Q6SA08 328 aa17.62■□□□□ 0.41
PTCHD3-202ENST00000622555 HEATR4Q86WZ0 1026 aa17.62■□□□□ 0.41
PTCHD3-202ENST00000622555 C4orf33Q8N1A6 199 aa17.62■□□□□ 0.41
PTCHD3-202ENST00000622555 CLDN19Q8N6F1 224 aa17.62■□□□□ 0.41
PTCHD3-202ENST00000622555 HEXDCQ8WVB3 486 aa17.62■□□□□ 0.41
PTCHD3-202ENST00000622555 TSPAN17Q96FV3 270 aa17.62■□□□□ 0.41
PTCHD3-202ENST00000622555 OLFM1Q99784 485 aa17.62■□□□□ 0.41
PTCHD3-202ENST00000622555 PRMT8Q9NR22 394 aaPredicted RBP17.62■□□□□ 0.41
PTCHD3-202ENST00000622555 COMMD10Q9Y6G5 202 aa17.62■□□□□ 0.41
PTCHD3-202ENST00000622555 RHOBTB1O94844 696 aa17.61■□□□□ 0.41
PTCHD3-202ENST00000622555 IGHV4-34P06331 123 aa17.61■□□□□ 0.41
PTCHD3-202ENST00000622555 STMN1P16949 149 aa17.61■□□□□ 0.41
PTCHD3-202ENST00000622555 TEAD1P28347 426 aa17.61■□□□□ 0.41
PTCHD3-202ENST00000622555 PGGT1BP53609 377 aa17.61■□□□□ 0.41
PTCHD3-202ENST00000622555 CDKN2DP55273 166 aa17.61■□□□□ 0.41
PTCHD3-202ENST00000622555 USP39Q53GS9 565 aaKnown RBP17.61■□□□□ 0.41
PTCHD3-202ENST00000622555 KDM7AQ6ZMT4 941 aa17.61■□□□□ 0.41
PTCHD3-202ENST00000622555 RAPH1Q70E73 1250 aa17.61■□□□□ 0.41
PTCHD3-202ENST00000622555 DET1Q7L5Y6 550 aa17.61■□□□□ 0.41
PTCHD3-202ENST00000622555 TMEM105Q8N8V8 129 aa17.61■□□□□ 0.41
PTCHD3-202ENST00000622555 DENND6BQ8NEG7 585 aa17.61■□□□□ 0.41
PTCHD3-202ENST00000622555 ISL2Q96A47 359 aa17.61■□□□□ 0.41
PTCHD3-202ENST00000622555 SMC6Q96SB8 1091 aa17.61■□□□□ 0.41
PTCHD3-202ENST00000622555 WDR26Q9H7D7 661 aa17.61■□□□□ 0.41
PTCHD3-202ENST00000622555 C10orf142B7Z368 130 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms