RNA–Protein interactions for RNA: ENST00000619322.4

CBWD3-215, Transcript of COBW domain containing 3, humanhuman

TSL 5

Gene CBWD3, Length 3,301 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-215ENST00000619322 TSNAXIP1Q2TAA8 658 aa5.38□□□□□ -1.55
CBWD3-215ENST00000619322 SLC9A4Q6AI14 798 aa5.38□□□□□ -1.55
CBWD3-215ENST00000619322 CDPF1Q6NVV7 123 aa5.38□□□□□ -1.55
CBWD3-215ENST00000619322 NT5DC3Q86UY8 548 aa5.38□□□□□ -1.55
CBWD3-215ENST00000619322 NRROSQ86YC3 692 aa5.38□□□□□ -1.55
CBWD3-215ENST00000619322 SCN4BQ8IWT1 228 aa5.38□□□□□ -1.55
CBWD3-215ENST00000619322 PMEPA1Q969W9 287 aa5.38□□□□□ -1.55
CBWD3-215ENST00000619322 SLC6A18Q96N87 628 aa5.38□□□□□ -1.55
CBWD3-215ENST00000619322 ALS2CR12Q96Q35 445 aa5.38□□□□□ -1.55
CBWD3-215ENST00000619322 LRRC61Q9BV99 259 aa5.38□□□□□ -1.55
CBWD3-215ENST00000619322 GSDMCQ9BYG8 508 aa5.38□□□□□ -1.55
CBWD3-215ENST00000619322 PITPNM3Q9BZ71 974 aa5.38□□□□□ -1.55
CBWD3-215ENST00000619322 MRM3Q9HC36 420 aaKnown RBP5.38□□□□□ -1.55
CBWD3-215ENST00000619322 TRPC7Q9HCX4 862 aa5.38□□□□□ -1.55
CBWD3-215ENST00000619322 PPANQ9NQ55 473 aaKnown RBP5.38□□□□□ -1.55
CBWD3-215ENST00000619322 NOP53Q9NZM5 478 aaKnown RBP5.38□□□□□ -1.55
CBWD3-215ENST00000619322 A0A1W2PNU3 283 aaPredicted RBP5.37□□□□□ -1.55
CBWD3-215ENST00000619322 QSOX1O00391 747 aa5.37□□□□□ -1.55
CBWD3-215ENST00000619322 DNAJC6O75061 913 aa5.37□□□□□ -1.55
CBWD3-215ENST00000619322 RTN2O75298 545 aa5.37□□□□□ -1.55
CBWD3-215ENST00000619322 HBQ1P09105 142 aa5.37□□□□□ -1.55
CBWD3-215ENST00000619322 TSFMP43897 325 aaKnown RBP5.37□□□□□ -1.55
CBWD3-215ENST00000619322 CCR10P46092 362 aa5.37□□□□□ -1.55
CBWD3-215ENST00000619322 IRAK1P51617 712 aa5.37□□□□□ -1.55
CBWD3-215ENST00000619322 OSTNP61366 133 aa5.37□□□□□ -1.55
CBWD3-215ENST00000619322 RAC1P63000 192 aa5.37□□□□□ -1.55
CBWD3-215ENST00000619322 SLC7A5Q01650 507 aa5.37□□□□□ -1.55
CBWD3-215ENST00000619322 CYTH1Q15438 398 aa5.37□□□□□ -1.55
CBWD3-215ENST00000619322 ASIC2Q16515 512 aa5.37□□□□□ -1.55
CBWD3-215ENST00000619322 PPP2R5EQ16537 467 aa5.37□□□□□ -1.55
CBWD3-215ENST00000619322 LONRF1Q17RB8 773 aa5.37□□□□□ -1.55
CBWD3-215ENST00000619322 EXOC3L4Q17RC7 722 aa5.37□□□□□ -1.55
CBWD3-215ENST00000619322 COL28A1Q2UY09 1125 aa5.37□□□□□ -1.55
CBWD3-215ENST00000619322 CCDC40Q4G0X9 1142 aa5.37□□□□□ -1.55
CBWD3-215ENST00000619322 PTPN20Q4JDL3 420 aa5.37□□□□□ -1.55
CBWD3-215ENST00000619322 PRRT3Q5FWE3 981 aa5.37□□□□□ -1.55
CBWD3-215ENST00000619322 HENMT1Q5T8I9 393 aaKnown RBP5.37□□□□□ -1.55
CBWD3-215ENST00000619322 ANO7Q6IWH7 933 aa5.37□□□□□ -1.55
CBWD3-215ENST00000619322 ZNF449Q6P9G9 518 aa5.37□□□□□ -1.55
CBWD3-215ENST00000619322 EMBQ6PCB8 327 aa5.37□□□□□ -1.55
CBWD3-215ENST00000619322 SERPINA13PQ6UXR4 307 aa5.37□□□□□ -1.55
CBWD3-215ENST00000619322 C4orf22Q6V702 233 aa5.37□□□□□ -1.55
CBWD3-215ENST00000619322 PARS2Q7L3T8 475 aaKnown RBP5.37□□□□□ -1.55
CBWD3-215ENST00000619322 IQCKQ8N0W5 287 aa5.37□□□□□ -1.55
CBWD3-215ENST00000619322 TRAM1L1Q8N609 369 aa5.37□□□□□ -1.55
CBWD3-215ENST00000619322 ZNF514Q96K75 400 aaPredicted RBP5.37□□□□□ -1.55
CBWD3-215ENST00000619322 MAGEE1Q9HCI5 957 aa5.37□□□□□ -1.55
CBWD3-215ENST00000619322 FBXL12Q9NXK8 326 aa5.37□□□□□ -1.55
CBWD3-215ENST00000619322 PCDHGB3Q9Y5G1 929 aa5.37□□□□□ -1.55
CBWD3-215ENST00000619322 PCDHA3Q9Y5H8 950 aa5.37□□□□□ -1.55
CBWD3-215ENST00000619322 NFS1Q9Y697 457 aa5.37□□□□□ -1.55
CBWD3-215ENST00000619322 NCOA6Q14686 2063 aaPredicted RBP5.37□□□□□ -1.55
CBWD3-215ENST00000619322 IGLV3-12A0A075B6K2 115 aa5.37□□□□□ -1.55
CBWD3-215ENST00000619322 A0A1B0GVT2 93 aa5.37□□□□□ -1.55
CBWD3-215ENST00000619322 HYAL3O43820 417 aaPredicted RBP5.37□□□□□ -1.55
CBWD3-215ENST00000619322 IPO13O94829 963 aaKnown RBP5.37□□□□□ -1.55
CBWD3-215ENST00000619322 ITGAVP06756 1048 aa5.37□□□□□ -1.55
CBWD3-215ENST00000619322 ATXN1LP0C7T5 689 aaKnown RBP5.37□□□□□ -1.55
CBWD3-215ENST00000619322 TMEM253P0C7T8 217 aa5.37□□□□□ -1.55
CBWD3-215ENST00000619322 NDUFS1P28331 727 aa5.37□□□□□ -1.55
CBWD3-215ENST00000619322 TYK2P29597 1187 aa5.37□□□□□ -1.55
CBWD3-215ENST00000619322 SIM1P81133 766 aaPredicted RBP5.37□□□□□ -1.55
CBWD3-215ENST00000619322 NFKB2Q00653 900 aa5.37□□□□□ -1.55
CBWD3-215ENST00000619322 FMO1Q01740 532 aa5.37□□□□□ -1.55
CBWD3-215ENST00000619322 ATP13A4Q4VNC1 1196 aa5.37□□□□□ -1.55
CBWD3-215ENST00000619322 SEZ6Q53EL9 994 aa5.37□□□□□ -1.55
CBWD3-215ENST00000619322 ACAD10Q6JQN1 1059 aa5.37□□□□□ -1.55
CBWD3-215ENST00000619322 DENND1BQ6P3S1 775 aa5.37□□□□□ -1.55
CBWD3-215ENST00000619322 UTS2BQ765I0 119 aa5.37□□□□□ -1.55
CBWD3-215ENST00000619322 SYVN1Q86TM6 617 aa5.37□□□□□ -1.55
CBWD3-215ENST00000619322 DENND1CQ8IV53 801 aa5.37□□□□□ -1.55
CBWD3-215ENST00000619322 ARHGEF19Q8IW93 802 aa5.37□□□□□ -1.55
CBWD3-215ENST00000619322 ZCCHC9Q8N567 271 aaKnown RBP5.37□□□□□ -1.55
CBWD3-215ENST00000619322 FBXO27Q8NI29 283 aa5.37□□□□□ -1.55
CBWD3-215ENST00000619322 UHMK1Q8TAS1 419 aaKnown RBP5.37□□□□□ -1.55
CBWD3-215ENST00000619322 HMGB4Q8WW32 186 aa5.37□□□□□ -1.55
CBWD3-215ENST00000619322 KCNE4Q8WWG9 221 aa5.37□□□□□ -1.55
CBWD3-215ENST00000619322 GAL3ST3Q96A11 431 aa5.37□□□□□ -1.55
CBWD3-215ENST00000619322 APOLD1Q96LR9 279 aa5.37□□□□□ -1.55
CBWD3-215ENST00000619322 GPR174Q9BXC1 333 aa5.37□□□□□ -1.55
CBWD3-215ENST00000619322 TFB2MQ9H5Q4 396 aaKnown RBP5.37□□□□□ -1.55
CBWD3-215ENST00000619322 CLMPQ9H6B4 373 aa5.37□□□□□ -1.55
CBWD3-215ENST00000619322 HACD3Q9P035 362 aa5.37□□□□□ -1.55
CBWD3-215ENST00000619322 BRWD1Q9NSI6 2320 aa5.37□□□□□ -1.55
CBWD3-215ENST00000619322 ARHGAP42A6NI28 874 aa5.36□□□□□ -1.55
CBWD3-215ENST00000619322 A8MUI8 341 aa5.36□□□□□ -1.55
CBWD3-215ENST00000619322 MID1O15344 667 aa5.36□□□□□ -1.55
CBWD3-215ENST00000619322 HEXIM1O94992 359 aaKnown RBP5.36□□□□□ -1.55
CBWD3-215ENST00000619322 TNFP01375 233 aa5.36□□□□□ -1.55
CBWD3-215ENST00000619322 ACSL1P33121 698 aa5.36□□□□□ -1.55
CBWD3-215ENST00000619322 NTF4P34130 210 aa5.36□□□□□ -1.55
CBWD3-215ENST00000619322 STAT5AP42229 794 aa5.36□□□□□ -1.55
CBWD3-215ENST00000619322 NR2C2P49116 596 aa5.36□□□□□ -1.55
CBWD3-215ENST00000619322 ADARP55265 1226 aaKnown RBP5.36□□□□□ -1.55
CBWD3-215ENST00000619322 PSPHP78330 225 aa5.36□□□□□ -1.55
CBWD3-215ENST00000619322 DSC2Q02487 901 aa5.36□□□□□ -1.55
CBWD3-215ENST00000619322 CNTN1Q12860 1018 aa5.36□□□□□ -1.55
CBWD3-215ENST00000619322 PIGHQ14442 188 aaPredicted RBP5.36□□□□□ -1.55
CBWD3-215ENST00000619322 RBBP5Q15291 538 aaKnown RBP5.36□□□□□ -1.55
CBWD3-215ENST00000619322 CCDC14Q49A88 953 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms