RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 ACOT8O14734 319 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 TBX18O95935 607 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 SOD2P04179 222 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 LTA4HP09960 611 aaKnown RBP6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 HAPLN1P10915 354 aaPredicted RBP6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 GFAPP14136 432 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 UGT1A6P19224 532 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 UGT1A1P22309 533 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 UGT1A4P22310 534 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 UGT1A3P35503 534 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 UGT1A5P35504 534 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 POLD2P49005 469 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 PGFP49763 221 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 MPP1Q00013 466 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 PITRM1Q5JRX3 1037 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 OTUD3Q5T2D3 398 aaPredicted RBP6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 SNX31Q8N9S9 440 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 CASP10Q92851 521 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 ROPN1LQ96C74 230 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 CENPNQ96H22 339 aaPredicted RBP6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 MAGED4Q96JG8 741 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 SLC29A1Q99808 456 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 HOPXQ9BPY8 73 aaPredicted RBP6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 KCTD14Q9BQ13 255 aaPredicted RBP6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 TBL1YQ9BQ87 522 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 YIPF4Q9BSR8 244 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 BDH2Q9BUT1 245 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 CRISPLD1Q9H336 500 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 CASS4Q9NQ75 786 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 TRNAU1APQ9NX07 287 aaKnown RBP6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 RNF11Q9Y3C5 154 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 TRAF6Q9Y4K3 522 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 A0A1W2PPW3 197 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 SLC12A8A0AV02 714 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 SYCE1LA8MT33 242 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 IPO13O94829 963 aaKnown RBP6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 TFPTP0C1Z6 253 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 CCNYL3P0C7X3 344 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 PORP16435 677 aaPredicted RBP6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 WEE1P30291 646 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 ALDH3B2P48448 385 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 POU4F1Q01851 419 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 RAB33AQ14088 237 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 VEPH1Q14D04 833 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 PCSK7Q16549 785 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 FUT11Q495W5 492 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 NEPROQ6NW34 567 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 PKN3Q6P5Z2 889 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 SCD5Q86SK9 330 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 GPR180Q86V85 440 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 CARM1Q86X55 608 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 OFCC1Q8IZS5 231 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 SLC39A11Q8N1S5 342 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 SFRP1Q8N474 314 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 ZNF420Q8TAQ5 688 aaPredicted RBP6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 PLEKHA8Q96JA3 519 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 SERPINB11Q96P15 392 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 SLC9A7Q96T83 725 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 GPATCH1Q9BRR8 931 aaKnown RBP6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 C11orf84Q9BUA3 381 aaPredicted RBP6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 TMEM121BQ9BXQ6 578 aaPredicted RBP6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 CD320Q9NPF0 282 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 MTRRQ9UBK8 725 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 ANAPC2Q9UJX6 822 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 FBXO5Q9UKT4 447 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 PCDHGA7Q9Y5G6 932 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 ORC6Q9Y5N6 252 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 HEMK1Q9Y5R4 338 aaPredicted RBP6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 A0A0J9YYE9 177 aa6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 ZCWPW2A0A1B0GU75 182 aa6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 PRORSD1PA6NEY8 169 aa6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 NEMP2A6NFY4 417 aa6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 AQP12BA6NM10 295 aa6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 GSTA4O15217 222 aa6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 TLL1O43897 1013 aa6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 TBC1D4O60343 1298 aa6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 BAIAP3O94812 1187 aa6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 PPM1AP35813 382 aa6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 CD97P48960 835 aa6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 HABP4Q5JVS0 413 aaKnown RBP6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 XKR5Q6UX68 686 aa6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 CHRDL2Q6WN34 429 aa6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 TMEM26Q6ZUK4 368 aa6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 KCTD8Q6ZWB6 473 aa6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 FRA10AC1Q70Z53 315 aa6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 DENND6AQ8IWF6 608 aa6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 AQP12AQ8IXF9 295 aa6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 CMTR2Q8IYT2 770 aaKnown RBP6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 ANKFN1Q8N957 763 aa6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 ZNF555Q8NEP9 628 aa6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 HEXDCQ8WVB3 486 aa6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 FOXJ1Q92949 421 aa6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 NT5C3BQ969T7 300 aa6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 SEPHS2Q99611 448 aa6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 SLC39A3Q9BRY0 314 aa6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 TRMOQ9BU70 441 aa6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 WDR6Q9NNW5 1121 aaKnown RBP6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 MTMR10Q9NXD2 777 aa6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 SMPD3Q9NY59 655 aaPredicted RBP6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 MARCH2Q9P0N8 246 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms