RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 TEX26Q8N6G2 289 aa4.5□□□□□ -1.69
SNCA-213ENST00000618500 SIDT2Q8NBJ9 832 aaKnown RBP4.5□□□□□ -1.69
SNCA-213ENST00000618500 FAR1Q8WVX9 515 aa4.5□□□□□ -1.69
SNCA-213ENST00000618500 PATE1Q8WXA2 126 aa4.5□□□□□ -1.69
SNCA-213ENST00000618500 FKBP10Q96AY3 582 aa4.5□□□□□ -1.69
SNCA-213ENST00000618500 MBD6Q96DN6 1003 aa4.5□□□□□ -1.69
SNCA-213ENST00000618500 C19orf60Q96EN9 201 aa4.5□□□□□ -1.69
SNCA-213ENST00000618500 VPS35Q96QK1 796 aa4.5□□□□□ -1.69
SNCA-213ENST00000618500 INSM2Q96T92 566 aaPredicted RBP4.5□□□□□ -1.69
SNCA-213ENST00000618500 SIX2Q9NPC8 291 aa4.5□□□□□ -1.69
SNCA-213ENST00000618500 PLCB1Q9NQ66 1216 aa4.5□□□□□ -1.69
SNCA-213ENST00000618500 TBC1D29Q9UFV1 150 aa4.5□□□□□ -1.69
SNCA-213ENST00000618500 NTNG1Q9Y2I2 539 aa4.5□□□□□ -1.69
SNCA-213ENST00000618500 ZNF835Q9Y2P0 537 aa4.5□□□□□ -1.69
SNCA-213ENST00000618500 PCDHGB6Q9Y5F9 930 aa4.5□□□□□ -1.69
SNCA-213ENST00000618500 TLN1Q9Y490 2541 aaKnown RBP4.5□□□□□ -1.69
SNCA-213ENST00000618500 ARHGEF17Q96PE2 2063 aaPredicted RBP4.5□□□□□ -1.69
SNCA-213ENST00000618500 FOXO6A8MYZ6 492 aa4.5□□□□□ -1.69
SNCA-213ENST00000618500 GRID2O43424 1007 aa4.5□□□□□ -1.69
SNCA-213ENST00000618500 KATNA1O75449 491 aa4.5□□□□□ -1.69
SNCA-213ENST00000618500 GOSR1O95249 250 aa4.5□□□□□ -1.69
SNCA-213ENST00000618500 SMC2O95347 1197 aa4.5□□□□□ -1.69
SNCA-213ENST00000618500 ATP1A3P13637 1013 aa4.5□□□□□ -1.69
SNCA-213ENST00000618500 LHCGRP22888 699 aa4.5□□□□□ -1.69
SNCA-213ENST00000618500 FLT3P36888 993 aa4.5□□□□□ -1.69
SNCA-213ENST00000618500 CCL11P51671 97 aa4.5□□□□□ -1.69
SNCA-213ENST00000618500 NOMO3P69849 1222 aa4.5□□□□□ -1.69
SNCA-213ENST00000618500 HSD11B2P80365 405 aa4.5□□□□□ -1.69
SNCA-213ENST00000618500 CACNG1Q06432 222 aa4.5□□□□□ -1.69
SNCA-213ENST00000618500 LRMPQ12912 555 aa4.5□□□□□ -1.69
SNCA-213ENST00000618500 AIMP2Q13155 320 aaKnown RBP4.5□□□□□ -1.69
SNCA-213ENST00000618500 ZNF169Q14929 603 aaPredicted RBP4.5□□□□□ -1.69
SNCA-213ENST00000618500 NCF4Q15080 339 aa4.5□□□□□ -1.69
SNCA-213ENST00000618500 ZNF789Q5FWF6 425 aa4.5□□□□□ -1.69
SNCA-213ENST00000618500 FAM102AQ5T9C2 384 aaPredicted RBP4.5□□□□□ -1.69
SNCA-213ENST00000618500 PWWP2BQ6NUJ5 590 aa4.5□□□□□ -1.69
SNCA-213ENST00000618500 RRAGAQ7L523 313 aa4.5□□□□□ -1.69
SNCA-213ENST00000618500 PHYKPLQ8IUZ5 450 aa4.5□□□□□ -1.69
SNCA-213ENST00000618500 EXD1Q8NHP7 514 aa4.5□□□□□ -1.69
SNCA-213ENST00000618500 SNX21Q969T3 373 aa4.5□□□□□ -1.69
SNCA-213ENST00000618500 CINPQ9BW66 212 aaPredicted RBP4.5□□□□□ -1.69
SNCA-213ENST00000618500 ZNF552Q9H707 407 aaPredicted RBP4.5□□□□□ -1.69
SNCA-213ENST00000618500 FANCEQ9HB96 536 aa4.5□□□□□ -1.69
SNCA-213ENST00000618500 UBE2TQ9NPD8 197 aaPredicted RBP4.5□□□□□ -1.69
SNCA-213ENST00000618500 TNFRSF10DQ9UBN6 386 aa4.5□□□□□ -1.69
SNCA-213ENST00000618500 NOVA2Q9UNW9 492 aaKnown RBP4.5□□□□□ -1.69
SNCA-213ENST00000618500 FBN3Q75N90 2809 aa4.49□□□□□ -1.69
SNCA-213ENST00000618500 SYNJ2BP-COX16A0A087WUM0 186 aa4.49□□□□□ -1.69
SNCA-213ENST00000618500 TCRBV5S1A1TA0A578 114 aa4.49□□□□□ -1.69
SNCA-213ENST00000618500 RCCD1A6NED2 376 aa4.49□□□□□ -1.69
SNCA-213ENST00000618500 PPP1R3GB7ZBB8 358 aa4.49□□□□□ -1.69
SNCA-213ENST00000618500 SRGAP2O75044 1071 aa4.49□□□□□ -1.69
SNCA-213ENST00000618500 EML2O95834 649 aa4.49□□□□□ -1.69
SNCA-213ENST00000618500 PEX11BO96011 259 aa4.49□□□□□ -1.69
SNCA-213ENST00000618500 CYP11B1P15538 503 aa4.49□□□□□ -1.69
SNCA-213ENST00000618500 MMP8P22894 467 aa4.49□□□□□ -1.69
SNCA-213ENST00000618500 GGCXP38435 758 aa4.49□□□□□ -1.69
SNCA-213ENST00000618500 GPR1P46091 355 aa4.49□□□□□ -1.69
SNCA-213ENST00000618500 GCGRP47871 477 aa4.49□□□□□ -1.69
SNCA-213ENST00000618500 PMS1P54277 932 aaKnown RBP4.49□□□□□ -1.69
SNCA-213ENST00000618500 GFERP55789 205 aa4.49□□□□□ -1.69
SNCA-213ENST00000618500 PTP4A2Q12974 167 aa4.49□□□□□ -1.69
SNCA-213ENST00000618500 GPS2Q13227 327 aa4.49□□□□□ -1.69
SNCA-213ENST00000618500 DCAF10Q5QP82 559 aa4.49□□□□□ -1.69
SNCA-213ENST00000618500 TMTC4Q5T4D3 741 aa4.49□□□□□ -1.69
SNCA-213ENST00000618500 CACHD1Q5VU97 1274 aa4.49□□□□□ -1.69
SNCA-213ENST00000618500 RAET1GQ6H3X3 334 aa4.49□□□□□ -1.69
SNCA-213ENST00000618500 SLFN11Q7Z7L1 901 aa4.49□□□□□ -1.69
SNCA-213ENST00000618500 TGIF2LYQ8IUE0 185 aa4.49□□□□□ -1.69
SNCA-213ENST00000618500 ARHGAP12Q8IWW6 846 aa4.49□□□□□ -1.69
SNCA-213ENST00000618500 BCORP1Q8N888 145 aa4.49□□□□□ -1.69
SNCA-213ENST00000618500 VPS50Q96JG6 964 aa4.49□□□□□ -1.69
SNCA-213ENST00000618500 SRPK1Q96SB4 655 aaKnown RBP4.49□□□□□ -1.69
SNCA-213ENST00000618500 NAA15Q9BXJ9 866 aaKnown RBP4.49□□□□□ -1.69
SNCA-213ENST00000618500 SLC40A1Q9NP59 571 aa4.49□□□□□ -1.69
SNCA-213ENST00000618500 HAUS2Q9NVX0 235 aa4.49□□□□□ -1.69
SNCA-213ENST00000618500 COX16Q9P0S2 106 aa4.49□□□□□ -1.69
SNCA-213ENST00000618500 FAM72CH0Y354 149 aa4.49□□□□□ -1.69
SNCA-213ENST00000618500 KMOO15229 486 aa4.49□□□□□ -1.69
SNCA-213ENST00000618500 TEX33O43247 280 aa4.49□□□□□ -1.69
SNCA-213ENST00000618500 PRICKLE3O43900 615 aaPredicted RBP4.49□□□□□ -1.69
SNCA-213ENST00000618500 TIAF1O95411 115 aa4.49□□□□□ -1.69
SNCA-213ENST00000618500 ZBTB11O95625 1053 aaPredicted RBP4.49□□□□□ -1.69
SNCA-213ENST00000618500 KLK3P07288 261 aaPredicted RBP4.49□□□□□ -1.69
SNCA-213ENST00000618500 IL4RP24394 825 aa4.49□□□□□ -1.69
SNCA-213ENST00000618500 HTR1EP28566 365 aa4.49□□□□□ -1.69
SNCA-213ENST00000618500 SDC4P31431 198 aa4.49□□□□□ -1.69
SNCA-213ENST00000618500 KRT9P35527 623 aa4.49□□□□□ -1.69
SNCA-213ENST00000618500 NDUFA8P51970 172 aa4.49□□□□□ -1.69
SNCA-213ENST00000618500 CCDC40Q4G0X9 1142 aa4.49□□□□□ -1.69
SNCA-213ENST00000618500 LRRC73Q5JTD7 316 aa4.49□□□□□ -1.69
SNCA-213ENST00000618500 FAM72AQ5TYM5 149 aa4.49□□□□□ -1.69
SNCA-213ENST00000618500 FAM72DQ6L9T8 149 aa4.49□□□□□ -1.69
SNCA-213ENST00000618500 GBP6Q6ZN66 633 aa4.49□□□□□ -1.69
SNCA-213ENST00000618500 FAM72BQ86X60 149 aa4.49□□□□□ -1.69
SNCA-213ENST00000618500 CAMK1DQ8IU85 385 aa4.49□□□□□ -1.69
SNCA-213ENST00000618500 ENDOVQ8N8Q3 282 aaKnown RBP4.49□□□□□ -1.69
SNCA-213ENST00000618500 PIH1D2Q8WWB5 315 aa4.49□□□□□ -1.69
SNCA-213ENST00000618500 SLC26A1Q9H2B4 701 aa4.49□□□□□ -1.69
SNCA-213ENST00000618500 SYNCQ9H7C4 482 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms