RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 DUX4L3P0CJ86 424 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 DUX4L4P0CJ87 422 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 DUX4L5P0CJ88 424 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 DUX4L6P0CJ89 424 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 DUX4L7P0CJ90 424 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 ACTR1AP61163 376 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 RPL7AP62424 266 aaKnown RBP9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 BNIP2Q12982 314 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 PTGES3Q15185 160 aaKnown RBP9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 TSNQ15631 228 aaKnown RBP9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 ZCWPW2Q504Y3 356 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 KIAA0930Q6ICG6 404 aaPredicted RBP9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 CHST15Q7LFX5 561 aaPredicted RBP9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 SNX32Q86XE0 403 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 OR2W6PQ8NHA6 318 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 ELMO3Q96BJ8 720 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 SLC38A2Q96QD8 506 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 EPB41L4BQ9H329 900 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 DUX4Q9UBX2 424 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 CCT8L1PA6NM43 557 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 MCIDASD6RGH6 385 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 USP12O75317 370 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 STK16O75716 305 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 NTSR1P30989 418 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 PRR5P85299 388 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 ALFQ53S48 1182 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 LINGO4Q6UY18 593 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 CHRDL2Q6WN34 429 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 GALNT7Q86SF2 657 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 GPR180Q86V85 440 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 PROSER1Q86XN7 944 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 RBM12BQ8IXT5 1001 aaKnown RBP9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 PLD5Q8N7P1 536 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 OR6C4Q8NGE1 309 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 ADAMTS15Q8TE58 950 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 TRPC4APQ8TEL6 797 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 MTFMTQ96DP5 389 aaKnown RBP9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 TLR10Q9BXR5 811 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 LACRTQ9GZZ8 138 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 L2HGDHQ9H9P8 463 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 RGS17Q9UGC6 210 aaPredicted RBP9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 GTF2A1LQ9UNN4 478 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 ERVK-11Q9UQG0 969 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 SPIN1Q9Y657 262 aaPredicted RBP9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 MGRN1O60291 552 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 CCKBRP32239 447 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 SHMT2P34897 504 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 CES3Q6UWW8 571 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 DHFR2Q86XF0 187 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 FSTL5Q8N475 847 aaPredicted RBP9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 VN1R2Q8NFZ6 395 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 DPYSL5Q9BPU6 564 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 HERPUD2Q9BSE4 406 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 MUC13Q9H3R2 512 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 WNT6Q9Y6F9 365 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 NPEPPSL1A6NEC2 478 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 TLX3O43711 291 aaPredicted RBP9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 WFS1O76024 890 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 FASP25445 335 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 MAPK10P53779 464 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 TAS2R40P59535 323 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 ZNF805Q5CZA5 627 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 CPTPQ5TA50 214 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 TXNDC8Q6A555 127 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 LRRC70Q7Z2Q7 622 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 TMPRSS11BQ86T26 416 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 GATAD2AQ86YP4 633 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 CAMK1DQ8IU85 385 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 ADHFE1Q8IWW8 467 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 TDHQ8IZJ6 230 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 RASGEF1CQ8N431 466 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 LIX1Q8N485 282 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 ZNF527Q8NB42 609 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 GPR156Q8NFN8 814 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 OR2T3Q8NH03 318 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 WDR92Q96MX6 357 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 TMEM27Q9HBJ8 222 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 ZNF180Q9UJW8 692 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 CA14Q9ULX7 337 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 DUSP10Q9Y6W6 482 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 ALOX15BO15296 676 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 NUMBP49757 651 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 ZNF132P52740 706 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 SNTA1Q13424 505 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 LRRC23Q53EV4 343 aaPredicted RBP9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 DLK2Q6UY11 383 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 PARGQ86W56 976 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 GPR65Q8IYL9 337 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 ANKRD49Q8WVL7 239 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 TMEM209Q96SK2 561 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 ACSS3Q9H6R3 686 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 RMI1Q9H9A7 625 aa9.66□□□□□ -0.86
TNFRSF9-204ENST00000615230 YJEFN3A6XGL0 299 aa9.65□□□□□ -0.86
TNFRSF9-204ENST00000615230 E7ENQ6 273 aa9.65□□□□□ -0.86
TNFRSF9-204ENST00000615230 ZNF23P17027 643 aa9.65□□□□□ -0.86
TNFRSF9-204ENST00000615230 HOXC13P31276 330 aa9.65□□□□□ -0.86
TNFRSF9-204ENST00000615230 PDX1P52945 283 aa9.65□□□□□ -0.86
TNFRSF9-204ENST00000615230 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.65□□□□□ -0.86
TNFRSF9-204ENST00000615230 SLC29A4Q7RTT9 530 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms