RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 CACNG1Q06432 222 aa11.36□□□□□ -0.59
SLIRP-212ENST00000613856 DNAJC3Q13217 504 aa11.36□□□□□ -0.59
SLIRP-212ENST00000613856 FASTKD1Q53R41 847 aaKnown RBP11.36□□□□□ -0.59
SLIRP-212ENST00000613856 RNF187Q5TA31 235 aaPredicted RBP11.36□□□□□ -0.59
SLIRP-212ENST00000613856 LIPIQ6XZB0 460 aa11.36□□□□□ -0.59
SLIRP-212ENST00000613856 ZNF765Q7L2R6 523 aa11.36□□□□□ -0.59
SLIRP-212ENST00000613856 HSD11B1LQ7Z5J1 315 aa11.36□□□□□ -0.59
SLIRP-212ENST00000613856 SNX20Q7Z614 316 aa11.36□□□□□ -0.59
SLIRP-212ENST00000613856 PTAR1Q7Z6K3 402 aaPredicted RBP11.36□□□□□ -0.59
SLIRP-212ENST00000613856 TECPR1Q7Z6L1 1165 aa11.36□□□□□ -0.59
SLIRP-212ENST00000613856 STRA8Q7Z7C7 330 aa11.36□□□□□ -0.59
SLIRP-212ENST00000613856 ZC3HC1Q86WB0 502 aaKnown RBP11.36□□□□□ -0.59
SLIRP-212ENST00000613856 DENND6AQ8IWF6 608 aa11.36□□□□□ -0.59
SLIRP-212ENST00000613856 NRSN1Q8IZ57 195 aa11.36□□□□□ -0.59
SLIRP-212ENST00000613856 DEFB119Q8N690 84 aa11.36□□□□□ -0.59
SLIRP-212ENST00000613856 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.36□□□□□ -0.59
SLIRP-212ENST00000613856 ISL2Q96A47 359 aa11.36□□□□□ -0.59
SLIRP-212ENST00000613856 CRELD1Q96HD1 420 aa11.36□□□□□ -0.59
SLIRP-212ENST00000613856 COQ10AQ96MF6 247 aa11.36□□□□□ -0.59
SLIRP-212ENST00000613856 TCF12Q99081 682 aa11.36□□□□□ -0.59
SLIRP-212ENST00000613856 RHOJQ9H4E5 214 aa11.36□□□□□ -0.59
SLIRP-212ENST00000613856 BPIFA1Q9NP55 256 aa11.36□□□□□ -0.59
SLIRP-212ENST00000613856 IL26Q9NPH9 171 aa11.36□□□□□ -0.59
SLIRP-212ENST00000613856 INTS10Q9NVR2 710 aaKnown RBP11.36□□□□□ -0.59
SLIRP-212ENST00000613856 SENP1Q9P0U3 644 aa11.36□□□□□ -0.59
SLIRP-212ENST00000613856 MARCH4Q9P2E8 410 aaPredicted RBP11.36□□□□□ -0.59
SLIRP-212ENST00000613856 CORO1CQ9ULV4 474 aaPredicted RBP11.36□□□□□ -0.59
SLIRP-212ENST00000613856 ITM2BQ9Y287 266 aa11.36□□□□□ -0.59
SLIRP-212ENST00000613856 VPS9D1Q9Y2B5 631 aa11.36□□□□□ -0.59
SLIRP-212ENST00000613856 ACTL7BQ9Y614 415 aa11.36□□□□□ -0.59
SLIRP-212ENST00000613856 SLC30A1Q9Y6M5 507 aa11.36□□□□□ -0.59
SLIRP-212ENST00000613856 A0A1W2PP55 124 aa11.35□□□□□ -0.59
SLIRP-212ENST00000613856 CYSRT1A8MQ03 144 aa11.35□□□□□ -0.59
SLIRP-212ENST00000613856 A8MX80 341 aa11.35□□□□□ -0.59
SLIRP-212ENST00000613856 PLK4O00444 970 aa11.35□□□□□ -0.59
SLIRP-212ENST00000613856 PFDN6O15212 129 aa11.35□□□□□ -0.59
SLIRP-212ENST00000613856 PLRG1O43660 514 aaKnown RBP11.35□□□□□ -0.59
SLIRP-212ENST00000613856 SRP72O76094 671 aaKnown RBP11.35□□□□□ -0.59
SLIRP-212ENST00000613856 PRAMEF1O95521 474 aa11.35□□□□□ -0.59
SLIRP-212ENST00000613856 ITGA2BP08514 1039 aa11.35□□□□□ -0.59
SLIRP-212ENST00000613856 SNRPAP09012 282 aaKnown RBP11.35□□□□□ -0.59
SLIRP-212ENST00000613856 GM2AP17900 193 aa11.35□□□□□ -0.59
SLIRP-212ENST00000613856 NDUFV2P19404 249 aa11.35□□□□□ -0.59
SLIRP-212ENST00000613856 ITPKAP23677 461 aa11.35□□□□□ -0.59
SLIRP-212ENST00000613856 GABRB3P28472 473 aa11.35□□□□□ -0.59
SLIRP-212ENST00000613856 POLD2P49005 469 aa11.35□□□□□ -0.59
SLIRP-212ENST00000613856 TTPAP49638 278 aa11.35□□□□□ -0.59
SLIRP-212ENST00000613856 LIG3P49916 1009 aa11.35□□□□□ -0.59
SLIRP-212ENST00000613856 TAS2R38P59533 333 aa11.35□□□□□ -0.59
SLIRP-212ENST00000613856 MPP1Q00013 466 aa11.35□□□□□ -0.59
SLIRP-212ENST00000613856 SEMG2Q02383 582 aa11.35□□□□□ -0.59
SLIRP-212ENST00000613856 CTBP1Q13363 440 aa11.35□□□□□ -0.59
SLIRP-212ENST00000613856 NFATC2Q13469 925 aa11.35□□□□□ -0.59
SLIRP-212ENST00000613856 SMAD1Q15797 465 aaKnown RBP11.35□□□□□ -0.59
SLIRP-212ENST00000613856 GPR33Q49SQ1 333 aa11.35□□□□□ -0.59
SLIRP-212ENST00000613856 USP39Q53GS9 565 aaKnown RBP11.35□□□□□ -0.59
SLIRP-212ENST00000613856 FAM151BQ6UXP7 276 aa11.35□□□□□ -0.59
SLIRP-212ENST00000613856 CERS6Q6ZMG9 384 aa11.35□□□□□ -0.59
SLIRP-212ENST00000613856 TIFABQ6ZNK6 161 aa11.35□□□□□ -0.59
SLIRP-212ENST00000613856 SDCCAG8Q86SQ7 713 aaPredicted RBP11.35□□□□□ -0.59
SLIRP-212ENST00000613856 TRABD2AQ86V40 505 aa11.35□□□□□ -0.59
SLIRP-212ENST00000613856 CYP4X1Q8N118 509 aa11.35□□□□□ -0.59
SLIRP-212ENST00000613856 HDDC3Q8N4P3 179 aa11.35□□□□□ -0.59
SLIRP-212ENST00000613856 OTUD6BQ8N6M0 293 aa11.35□□□□□ -0.59
SLIRP-212ENST00000613856 PNPLA1Q8N8W4 532 aa11.35□□□□□ -0.59
SLIRP-212ENST00000613856 GPR26Q8NDV2 337 aa11.35□□□□□ -0.59
SLIRP-212ENST00000613856 CXorf40AQ8TE69 158 aa11.35□□□□□ -0.59
SLIRP-212ENST00000613856 MRRFQ96E11 262 aaKnown RBP11.35□□□□□ -0.59
SLIRP-212ENST00000613856 DTD2Q96FN9 168 aa11.35□□□□□ -0.59
SLIRP-212ENST00000613856 SIPA1Q96FS4 1042 aa11.35□□□□□ -0.59
SLIRP-212ENST00000613856 VPS39Q96JC1 886 aa11.35□□□□□ -0.59
SLIRP-212ENST00000613856 MRGPRX1Q96LB2 322 aa11.35□□□□□ -0.59
SLIRP-212ENST00000613856 GPR22Q99680 433 aa11.35□□□□□ -0.59
SLIRP-212ENST00000613856 OMDQ99983 421 aa11.35□□□□□ -0.59
SLIRP-212ENST00000613856 CENPHQ9H3R5 247 aa11.35□□□□□ -0.59
SLIRP-212ENST00000613856 POLMQ9NP87 494 aaPredicted RBP11.35□□□□□ -0.59
SLIRP-212ENST00000613856 SMOXQ9NWM0 555 aa11.35□□□□□ -0.59
SLIRP-212ENST00000613856 KCTD5Q9NXV2 234 aa11.35□□□□□ -0.59
SLIRP-212ENST00000613856 SERGEFQ9UGK8 458 aa11.35□□□□□ -0.59
SLIRP-212ENST00000613856 TBK1Q9UHD2 729 aa11.35□□□□□ -0.59
SLIRP-212ENST00000613856 PIKFYVEQ9Y2I7 2098 aa11.35□□□□□ -0.59
SLIRP-212ENST00000613856 NUMA1Q14980 2115 aa11.35□□□□□ -0.59
SLIRP-212ENST00000613856 TCRBV21S2A2A0A5A6 115 aa11.34□□□□□ -0.59
SLIRP-212ENST00000613856 HMX2A2RU54 273 aa11.34□□□□□ -0.59
SLIRP-212ENST00000613856 TRIM49D1C9J1S8 452 aa11.34□□□□□ -0.59
SLIRP-212ENST00000613856 WNT9AO14904 365 aa11.34□□□□□ -0.59
SLIRP-212ENST00000613856 RNASEH2AO75792 299 aaKnown RBP11.34□□□□□ -0.59
SLIRP-212ENST00000613856 S1PR4O95977 384 aa11.34□□□□□ -0.59
SLIRP-212ENST00000613856 IGLV3-19P01714 112 aa11.34□□□□□ -0.59
SLIRP-212ENST00000613856 AHSGP02765 367 aa11.34□□□□□ -0.59
SLIRP-212ENST00000613856 C6P13671 934 aa11.34□□□□□ -0.59
SLIRP-212ENST00000613856 GABRG2P18507 467 aa11.34□□□□□ -0.59
SLIRP-212ENST00000613856 KRT15P19012 456 aa11.34□□□□□ -0.59
SLIRP-212ENST00000613856 MAGEA12P43365 314 aa11.34□□□□□ -0.59
SLIRP-212ENST00000613856 ADARP55265 1226 aaKnown RBP11.34□□□□□ -0.59
SLIRP-212ENST00000613856 ITGA9Q13797 1035 aa11.34□□□□□ -0.59
SLIRP-212ENST00000613856 SEMA3AQ14563 771 aa11.34□□□□□ -0.59
SLIRP-212ENST00000613856 AGERQ15109 404 aa11.34□□□□□ -0.59
SLIRP-212ENST00000613856 ZRANB3Q5FWF4 1079 aa11.34□□□□□ -0.59
SLIRP-212ENST00000613856 HENMT1Q5T8I9 393 aaKnown RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms