RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 ZNF423Q2M1K9 1284 aa11.84□□□□□ -0.51
USP6NL-206ENST00000609853 MMEL1Q495T6 779 aa11.84□□□□□ -0.51
USP6NL-206ENST00000609853 AGKQ53H12 422 aa11.84□□□□□ -0.51
USP6NL-206ENST00000609853 ARHGAP15Q53QZ3 475 aa11.84□□□□□ -0.51
USP6NL-206ENST00000609853 PITRM1Q5JRX3 1037 aa11.84□□□□□ -0.51
USP6NL-206ENST00000609853 PTRHD1Q6GMV3 140 aaKnown RBP11.84□□□□□ -0.51
USP6NL-206ENST00000609853 OGFOD2Q6N063 350 aa11.84□□□□□ -0.51
USP6NL-206ENST00000609853 METTL2BQ6P1Q9 378 aaKnown RBP11.84□□□□□ -0.51
USP6NL-206ENST00000609853 CYHR1Q6ZMK1 362 aa11.84□□□□□ -0.51
USP6NL-206ENST00000609853 TPGS1Q6ZTW0 290 aa11.84□□□□□ -0.51
USP6NL-206ENST00000609853 RPS27LQ71UM5 84 aaKnown RBP11.84□□□□□ -0.51
USP6NL-206ENST00000609853 OTOP2Q7RTS6 562 aa11.84□□□□□ -0.51
USP6NL-206ENST00000609853 SPATA19Q7Z5L4 167 aa11.84□□□□□ -0.51
USP6NL-206ENST00000609853 DHDDSQ86SQ9 333 aa11.84□□□□□ -0.51
USP6NL-206ENST00000609853 SERPINA9Q86WD7 417 aa11.84□□□□□ -0.51
USP6NL-206ENST00000609853 PLPP6Q8IY26 295 aa11.84□□□□□ -0.51
USP6NL-206ENST00000609853 PAF1Q8N7H5 531 aa11.84□□□□□ -0.51
USP6NL-206ENST00000609853 PCYOX1LQ8NBM8 494 aa11.84□□□□□ -0.51
USP6NL-206ENST00000609853 TRPC4APQ8TEL6 797 aa11.84□□□□□ -0.51
USP6NL-206ENST00000609853 TSPEARQ8WU66 669 aa11.84□□□□□ -0.51
USP6NL-206ENST00000609853 EEF1AKMT1Q8WVE0 214 aa11.84□□□□□ -0.51
USP6NL-206ENST00000609853 FAM136AQ96C01 138 aa11.84□□□□□ -0.51
USP6NL-206ENST00000609853 ROPN1LQ96C74 230 aa11.84□□□□□ -0.51
USP6NL-206ENST00000609853 EID2BQ96D98 161 aa11.84□□□□□ -0.51
USP6NL-206ENST00000609853 ZNF641Q96N77 438 aaPredicted RBP11.84□□□□□ -0.51
USP6NL-206ENST00000609853 CORO1BQ9BR76 489 aa11.84□□□□□ -0.51
USP6NL-206ENST00000609853 AKTIPQ9H8T0 292 aa11.84□□□□□ -0.51
USP6NL-206ENST00000609853 KLHL42Q9P2K6 505 aa11.84□□□□□ -0.51
USP6NL-206ENST00000609853 SLC25A13Q9UJS0 675 aa11.84□□□□□ -0.51
USP6NL-206ENST00000609853 PPM1HQ9ULR3 514 aa11.84□□□□□ -0.51
USP6NL-206ENST00000609853 ZNF821O75541 412 aaPredicted RBP11.83□□□□□ -0.52
USP6NL-206ENST00000609853 MATN4O95460 622 aa11.83□□□□□ -0.52
USP6NL-206ENST00000609853 BAG2O95816 211 aa11.83□□□□□ -0.52
USP6NL-206ENST00000609853 FGBP02675 491 aa11.83□□□□□ -0.52
USP6NL-206ENST00000609853 ALPIP09923 528 aa11.83□□□□□ -0.52
USP6NL-206ENST00000609853 SRCP12931 536 aa11.83□□□□□ -0.52
USP6NL-206ENST00000609853 ENO3P13929 434 aaPredicted RBP11.83□□□□□ -0.52
USP6NL-206ENST00000609853 IDO1P14902 403 aa11.83□□□□□ -0.52
USP6NL-206ENST00000609853 PTPN2P17706 415 aa11.83□□□□□ -0.52
USP6NL-206ENST00000609853 LBPP18428 481 aa11.83□□□□□ -0.52
USP6NL-206ENST00000609853 DGKAP23743 735 aa11.83□□□□□ -0.52
USP6NL-206ENST00000609853 HNF1BP35680 557 aa11.83□□□□□ -0.52
USP6NL-206ENST00000609853 SPAM1P38567 509 aa11.83□□□□□ -0.52
USP6NL-206ENST00000609853 CLNS1AP54105 237 aaKnown RBP11.83□□□□□ -0.52
USP6NL-206ENST00000609853 MYLK3Q32MK0 819 aa11.83□□□□□ -0.52
USP6NL-206ENST00000609853 COQ5Q5HYK3 327 aa11.83□□□□□ -0.52
USP6NL-206ENST00000609853 TCHHL1Q5QJ38 904 aaPredicted RBP11.83□□□□□ -0.52
USP6NL-206ENST00000609853 TPRG1Q6ZUI0 275 aa11.83□□□□□ -0.52
USP6NL-206ENST00000609853 USP45Q70EL2 814 aa11.83□□□□□ -0.52
USP6NL-206ENST00000609853 CMTM8Q8IZV2 173 aa11.83□□□□□ -0.52
USP6NL-206ENST00000609853 PCDH20Q8N6Y1 951 aaKnown RBP11.83□□□□□ -0.52
USP6NL-206ENST00000609853 MRPL43Q8N983 215 aaKnown RBP11.83□□□□□ -0.52
USP6NL-206ENST00000609853 RIN3Q8TB24 985 aa11.83□□□□□ -0.52
USP6NL-206ENST00000609853 BHMTQ93088 406 aa11.83□□□□□ -0.52
USP6NL-206ENST00000609853 ECHDC3Q96DC8 303 aa11.83□□□□□ -0.52
USP6NL-206ENST00000609853 SCRN2Q96FV2 425 aa11.83□□□□□ -0.52
USP6NL-206ENST00000609853 MARK4Q96L34 752 aa11.83□□□□□ -0.52
USP6NL-206ENST00000609853 ZNF382Q96SR6 550 aa11.83□□□□□ -0.52
USP6NL-206ENST00000609853 HTATIP2Q9BUP3 242 aa11.83□□□□□ -0.52
USP6NL-206ENST00000609853 ASB8Q9H765 288 aa11.83□□□□□ -0.52
USP6NL-206ENST00000609853 WBP1LQ9NX94 342 aa11.83□□□□□ -0.52
USP6NL-206ENST00000609853 CD274Q9NZQ7 290 aa11.83□□□□□ -0.52
USP6NL-206ENST00000609853 C6orf203Q9P0P8 240 aaPredicted RBP11.83□□□□□ -0.52
USP6NL-206ENST00000609853 TBC1D14Q9P2M4 693 aa11.83□□□□□ -0.52
USP6NL-206ENST00000609853 EPS15L1Q9UBC2 864 aa11.83□□□□□ -0.52
USP6NL-206ENST00000609853 PCTPQ9UKL6 214 aa11.83□□□□□ -0.52
USP6NL-206ENST00000609853 INTS6Q9UL03 887 aaKnown RBP11.83□□□□□ -0.52
USP6NL-206ENST00000609853 GLYATL1P3A0A0U1RQE8 302 aa11.83□□□□□ -0.52
USP6NL-206ENST00000609853 ZBBXA8MT70 800 aa11.83□□□□□ -0.52
USP6NL-206ENST00000609853 AGAP14A8MT82 685 aa11.83□□□□□ -0.52
USP6NL-206ENST00000609853 HAX1O00165 279 aa11.83□□□□□ -0.52
USP6NL-206ENST00000609853 TRIM38O00635 465 aa11.83□□□□□ -0.52
USP6NL-206ENST00000609853 GAPDHSO14556 408 aaPredicted RBP11.83□□□□□ -0.52
USP6NL-206ENST00000609853 PEX1O43933 1283 aa11.83□□□□□ -0.52
USP6NL-206ENST00000609853 NRP2O60462 931 aa11.83□□□□□ -0.52
USP6NL-206ENST00000609853 BCAS2O75934 225 aaPredicted RBP11.83□□□□□ -0.52
USP6NL-206ENST00000609853 PRAMEF12O95522 483 aa11.83□□□□□ -0.52
USP6NL-206ENST00000609853 POP4O95707 220 aaKnown RBP11.83□□□□□ -0.52
USP6NL-206ENST00000609853 S100BP04271 92 aaPredicted RBP11.83□□□□□ -0.52
USP6NL-206ENST00000609853 ACRV1P26436 265 aa11.83□□□□□ -0.52
USP6NL-206ENST00000609853 HOXA9P31269 272 aa11.83□□□□□ -0.52
USP6NL-206ENST00000609853 PSME3P61289 254 aa11.83□□□□□ -0.52
USP6NL-206ENST00000609853 LRP8Q14114 963 aa11.83□□□□□ -0.52
USP6NL-206ENST00000609853 FLOT2Q14254 428 aa11.83□□□□□ -0.52
USP6NL-206ENST00000609853 PCBP2Q15366 365 aaKnown RBP eCLIP11.83□□□□□ -0.52
USP6NL-206ENST00000609853 TGFBIQ15582 683 aa11.83□□□□□ -0.52
USP6NL-206ENST00000609853 PPP1R3AQ16821 1122 aa11.83□□□□□ -0.52
USP6NL-206ENST00000609853 SPATS1Q496A3 300 aa11.83□□□□□ -0.52
USP6NL-206ENST00000609853 DGKKQ5KSL6 1271 aa11.83□□□□□ -0.52
USP6NL-206ENST00000609853 MACC1Q6ZN28 852 aa11.83□□□□□ -0.52
USP6NL-206ENST00000609853 GK5Q6ZS86 529 aa11.83□□□□□ -0.52
USP6NL-206ENST00000609853 CPNE9Q8IYJ1 553 aa11.83□□□□□ -0.52
USP6NL-206ENST00000609853 MIER2Q8N344 545 aa11.83□□□□□ -0.52
USP6NL-206ENST00000609853 OTUB2Q96DC9 234 aa11.83□□□□□ -0.52
USP6NL-206ENST00000609853 SLC30A3Q99726 388 aa11.83□□□□□ -0.52
USP6NL-206ENST00000609853 TCF25Q9BQ70 676 aa11.83□□□□□ -0.52
USP6NL-206ENST00000609853 HGH1Q9BTY7 390 aa11.83□□□□□ -0.52
USP6NL-206ENST00000609853 SUV39H2Q9H5I1 410 aa11.83□□□□□ -0.52
USP6NL-206ENST00000609853 IL26Q9NPH9 171 aa11.83□□□□□ -0.52
USP6NL-206ENST00000609853 LATS2Q9NRM7 1088 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms