RNA–Protein interactions for RNA: ENST00000607055.1

NECAB3-221, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 4

Gene NECAB3, Length 554 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-221ENST00000607055 PMLP29590 882 aa21.4■■□□□ 1.02
NECAB3-221ENST00000607055 CTSKP43235 329 aa21.4■■□□□ 1.02
NECAB3-221ENST00000607055 GRIK2Q13002 908 aa21.4■■□□□ 1.02
NECAB3-221ENST00000607055 LYPLAL1Q5VWZ2 237 aa21.4■■□□□ 1.02
NECAB3-221ENST00000607055 ZNF470Q6ECI4 717 aa21.4■■□□□ 1.02
NECAB3-221ENST00000607055 CERS6Q6ZMG9 384 aa21.4■■□□□ 1.02
NECAB3-221ENST00000607055 C3orf62Q6ZUJ4 267 aa21.4■■□□□ 1.02
NECAB3-221ENST00000607055 ADGRG6Q86SQ4 1221 aa21.4■■□□□ 1.02
NECAB3-221ENST00000607055 SDCCAG8Q86SQ7 713 aaPredicted RBP21.4■■□□□ 1.02
NECAB3-221ENST00000607055 PARGQ86W56 976 aa21.4■■□□□ 1.02
NECAB3-221ENST00000607055 OR1E3Q8WZA6 343 aa21.4■■□□□ 1.02
NECAB3-221ENST00000607055 TSACCQ96A04 125 aaPredicted RBP21.4■■□□□ 1.02
NECAB3-221ENST00000607055 CCDC97Q96F63 343 aaPredicted RBP21.4■■□□□ 1.02
NECAB3-221ENST00000607055 DCUN1D1Q96GG9 259 aa21.4■■□□□ 1.02
NECAB3-221ENST00000607055 TTC25Q96NG3 672 aa21.4■■□□□ 1.02
NECAB3-221ENST00000607055 TTC1Q99614 292 aa21.4■■□□□ 1.02
NECAB3-221ENST00000607055 FAM167BQ9BTA0 163 aa21.4■■□□□ 1.02
NECAB3-221ENST00000607055 NUSAP1Q9BXS6 441 aaKnown RBP21.4■■□□□ 1.02
NECAB3-221ENST00000607055 MRPL40Q9NQ50 206 aaKnown RBP21.4■■□□□ 1.02
NECAB3-221ENST00000607055 ATXN10Q9UBB4 475 aa21.4■■□□□ 1.02
NECAB3-221ENST00000607055 SLC17A4Q9Y2C5 497 aa21.4■■□□□ 1.02
NECAB3-221ENST00000607055 PROB1E7EW31 1015 aa21.39■■□□□ 1.01
NECAB3-221ENST00000607055 CEACAM5P06731 702 aa21.39■■□□□ 1.01
NECAB3-221ENST00000607055 IRX4P78413 519 aa21.39■■□□□ 1.01
NECAB3-221ENST00000607055 SPEM2Q0P670 501 aa21.39■■□□□ 1.01
NECAB3-221ENST00000607055 TMEM115Q12893 351 aaPredicted RBP21.39■■□□□ 1.01
NECAB3-221ENST00000607055 EIF2B5Q13144 721 aaKnown RBP21.39■■□□□ 1.01
NECAB3-221ENST00000607055 FRG1Q14331 258 aaKnown RBP21.39■■□□□ 1.01
NECAB3-221ENST00000607055 ALG11Q2TAA5 492 aa21.39■■□□□ 1.01
NECAB3-221ENST00000607055 ZNF542PQ5EBM4 170 aa21.39■■□□□ 1.01
NECAB3-221ENST00000607055 PRAMEF14Q5SWL7 426 aa21.39■■□□□ 1.01
NECAB3-221ENST00000607055 KCTD16Q68DU8 428 aa21.39■■□□□ 1.01
NECAB3-221ENST00000607055 RD3Q7Z3Z2 195 aa21.39■■□□□ 1.01
NECAB3-221ENST00000607055 GPR150Q8NGU9 434 aa21.39■■□□□ 1.01
NECAB3-221ENST00000607055 CALML6Q8TD86 181 aa21.39■■□□□ 1.01
NECAB3-221ENST00000607055 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.39■■□□□ 1.01
NECAB3-221ENST00000607055 PDXPQ96GD0 296 aa21.39■■□□□ 1.01
NECAB3-221ENST00000607055 BOCQ9BWV1 1114 aa21.39■■□□□ 1.01
NECAB3-221ENST00000607055 ZCCHC2Q9C0B9 1178 aaKnown RBP21.39■■□□□ 1.01
NECAB3-221ENST00000607055 VPS18Q9P253 973 aa21.39■■□□□ 1.01
NECAB3-221ENST00000607055 PNMA8BQ9ULN7 279 aaPredicted RBP21.39■■□□□ 1.01
NECAB3-221ENST00000607055 PLXNB3Q9ULL4 1909 aa21.38■■□□□ 1.01
NECAB3-221ENST00000607055 PRSS38A1L453 326 aa21.38■■□□□ 1.01
NECAB3-221ENST00000607055 CFAP99D6REC4 459 aa21.38■■□□□ 1.01
NECAB3-221ENST00000607055 SCAMP1O15126 338 aa21.38■■□□□ 1.01
NECAB3-221ENST00000607055 VEGFDO43915 354 aa21.38■■□□□ 1.01
NECAB3-221ENST00000607055 CDK14O94921 469 aa21.38■■□□□ 1.01
NECAB3-221ENST00000607055 F7P08709 466 aaPredicted RBP21.38■■□□□ 1.01
NECAB3-221ENST00000607055 RALBP11234 206 aa21.38■■□□□ 1.01
NECAB3-221ENST00000607055 ZNF8P17098 575 aaPredicted RBP21.38■■□□□ 1.01
NECAB3-221ENST00000607055 OGNP20774 298 aaKnown RBP21.38■■□□□ 1.01
NECAB3-221ENST00000607055 PPARGP37231 505 aaPredicted RBP21.38■■□□□ 1.01
NECAB3-221ENST00000607055 TTPAP49638 278 aa21.38■■□□□ 1.01
NECAB3-221ENST00000607055 SRP54P61011 504 aaKnown RBP21.38■■□□□ 1.01
NECAB3-221ENST00000607055 B4GALNT1Q00973 533 aa21.38■■□□□ 1.01
NECAB3-221ENST00000607055 PPARDQ03181 441 aa21.38■■□□□ 1.01
NECAB3-221ENST00000607055 MGAT5Q09328 741 aa21.38■■□□□ 1.01
NECAB3-221ENST00000607055 GTF2H3Q13889 308 aa21.38■■□□□ 1.01
NECAB3-221ENST00000607055 ITIH4Q14624 930 aa21.38■■□□□ 1.01
NECAB3-221ENST00000607055 UBAP2Q5T6F2 1119 aaKnown RBP21.38■■□□□ 1.01
NECAB3-221ENST00000607055 DET1Q7L5Y6 550 aa21.38■■□□□ 1.01
NECAB3-221ENST00000607055 HID1Q8IV36 788 aa21.38■■□□□ 1.01
NECAB3-221ENST00000607055 DENND6AQ8IWF6 608 aa21.38■■□□□ 1.01
NECAB3-221ENST00000607055 LMNTD2Q8IXW0 634 aa21.38■■□□□ 1.01
NECAB3-221ENST00000607055 NAT14Q8WUY8 206 aa21.38■■□□□ 1.01
NECAB3-221ENST00000607055 CYP4F12Q9HCS2 524 aa21.38■■□□□ 1.01
NECAB3-221ENST00000607055 DNAJC28Q9NX36 388 aa21.38■■□□□ 1.01
NECAB3-221ENST00000607055 MOCS1Q9NZB8 636 aa21.38■■□□□ 1.01
NECAB3-221ENST00000607055 SLC17A6Q9P2U8 582 aa21.38■■□□□ 1.01
NECAB3-221ENST00000607055 IGLV3-16A0A075B6K0 115 aa21.37■■□□□ 1.01
NECAB3-221ENST00000607055 TCRBV9S1A1TA0A576 114 aa21.37■■□□□ 1.01
NECAB3-221ENST00000607055 ARHGAP33O14559 1287 aa21.37■■□□□ 1.01
NECAB3-221ENST00000607055 TNFRSF10CO14798 259 aa21.37■■□□□ 1.01
NECAB3-221ENST00000607055 NDUFS3O75489 264 aa21.37■■□□□ 1.01
NECAB3-221ENST00000607055 SPAG6O75602 509 aa21.37■■□□□ 1.01
NECAB3-221ENST00000607055 ACSL3O95573 720 aa21.37■■□□□ 1.01
NECAB3-221ENST00000607055 FUCA1P04066 466 aa21.37■■□□□ 1.01
NECAB3-221ENST00000607055 SYPP08247 313 aa21.37■■□□□ 1.01
NECAB3-221ENST00000607055 ZNF806P0C7X5 589 aa21.37■■□□□ 1.01
NECAB3-221ENST00000607055 SLC1A2P43004 574 aa21.37■■□□□ 1.01
NECAB3-221ENST00000607055 PMS2P54278 862 aa21.37■■□□□ 1.01
NECAB3-221ENST00000607055 CTBP1Q13363 440 aa21.37■■□□□ 1.01
NECAB3-221ENST00000607055 SF3A2Q15428 464 aaKnown RBP21.37■■□□□ 1.01
NECAB3-221ENST00000607055 CILP2Q8IUL8 1156 aa21.37■■□□□ 1.01
NECAB3-221ENST00000607055 RASGEF1AQ8N9B8 481 aa21.37■■□□□ 1.01
NECAB3-221ENST00000607055 GABPB2Q8TAK5 448 aaPredicted RBP21.37■■□□□ 1.01
NECAB3-221ENST00000607055 HEXDCQ8WVB3 486 aa21.37■■□□□ 1.01
NECAB3-221ENST00000607055 GTPBP2Q9BX10 602 aaKnown RBP21.37■■□□□ 1.01
NECAB3-221ENST00000607055 CAAP1Q9H8G2 361 aa21.37■■□□□ 1.01
NECAB3-221ENST00000607055 CARS2Q9HA77 564 aaKnown RBP21.37■■□□□ 1.01
NECAB3-221ENST00000607055 RAB21Q9UL25 225 aa21.37■■□□□ 1.01
NECAB3-221ENST00000607055 SUFUQ9UMX1 484 aa21.37■■□□□ 1.01
NECAB3-221ENST00000607055 PFDN6O15212 129 aa21.36■■□□□ 1.01
NECAB3-221ENST00000607055 NUAK1O60285 661 aa21.36■■□□□ 1.01
NECAB3-221ENST00000607055 OR1I1O60431 355 aa21.36■■□□□ 1.01
NECAB3-221ENST00000607055 DNAJC6O75061 913 aa21.36■■□□□ 1.01
NECAB3-221ENST00000607055 RASGRP1O95267 797 aa21.36■■□□□ 1.01
NECAB3-221ENST00000607055 TUBBP07437 444 aa21.36■■□□□ 1.01
NECAB3-221ENST00000607055 IVLP07476 585 aa21.36■■□□□ 1.01
NECAB3-221ENST00000607055 ENGP17813 658 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms