RNA–Protein interactions for RNA: ENST00000606952.5

PMF1-206, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 1,275 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-206ENST00000606952 SMC6Q96SB8 1091 aa16.34■□□□□ 0.21
PMF1-206ENST00000606952 OLFM1Q99784 485 aa16.34■□□□□ 0.21
PMF1-206ENST00000606952 SLC17A9Q9BYT1 436 aa16.34■□□□□ 0.21
PMF1-206ENST00000606952 LATS2Q9NRM7 1088 aa16.34■□□□□ 0.21
PMF1-206ENST00000606952 OGFRQ9NZT2 677 aa16.34■□□□□ 0.21
PMF1-206ENST00000606952 KLHL42Q9P2K6 505 aa16.34■□□□□ 0.21
PMF1-206ENST00000606952 GNPTGQ9UJJ9 305 aa16.34■□□□□ 0.21
PMF1-206ENST00000606952 ANKRD6Q9Y2G4 727 aa16.34■□□□□ 0.21
PMF1-206ENST00000606952 CRYL1Q9Y2S2 319 aa16.34■□□□□ 0.21
PMF1-206ENST00000606952 IGHV1OR15-9A0A0B4J2B8 117 aa16.33■□□□□ 0.2
PMF1-206ENST00000606952 CCDC163A0A0D9SF12 145 aa16.33■□□□□ 0.2
PMF1-206ENST00000606952 QSOX1O00391 747 aa16.33■□□□□ 0.2
PMF1-206ENST00000606952 AP2A2O94973 939 aa16.33■□□□□ 0.2
PMF1-206ENST00000606952 SEMA4FO95754 770 aa16.33■□□□□ 0.2
PMF1-206ENST00000606952 DCNP07585 359 aaKnown RBP16.33■□□□□ 0.2
PMF1-206ENST00000606952 PYGBP11216 843 aa16.33■□□□□ 0.2
PMF1-206ENST00000606952 COL6A2P12110 1019 aa16.33■□□□□ 0.2
PMF1-206ENST00000606952 BRAFP15056 766 aa16.33■□□□□ 0.2
PMF1-206ENST00000606952 CREB1P16220 341 aa16.33■□□□□ 0.2
PMF1-206ENST00000606952 STMN1P16949 149 aa16.33■□□□□ 0.2
PMF1-206ENST00000606952 KRT4P19013 534 aa16.33■□□□□ 0.2
PMF1-206ENST00000606952 NR1D1P20393 614 aa16.33■□□□□ 0.2
PMF1-206ENST00000606952 TYK2P29597 1187 aa16.33■□□□□ 0.2
PMF1-206ENST00000606952 GPR1P46091 355 aa16.33■□□□□ 0.2
PMF1-206ENST00000606952 CXCL12P48061 93 aa16.33■□□□□ 0.2
PMF1-206ENST00000606952 PPP2R2AP63151 447 aa16.33■□□□□ 0.2
PMF1-206ENST00000606952 PDE1CQ14123 709 aaPredicted RBP16.33■□□□□ 0.2
PMF1-206ENST00000606952 LRRC14Q15048 493 aa16.33■□□□□ 0.2
PMF1-206ENST00000606952 IRF4Q15306 451 aa16.33■□□□□ 0.2
PMF1-206ENST00000606952 INSCQ1MX18 579 aa16.33■□□□□ 0.2
PMF1-206ENST00000606952 RAET1GQ6H3X3 334 aa16.33■□□□□ 0.2
PMF1-206ENST00000606952 PNCKQ6P2M8 343 aa16.33■□□□□ 0.2
PMF1-206ENST00000606952 KDM7AQ6ZMT4 941 aa16.33■□□□□ 0.2
PMF1-206ENST00000606952 CMC1Q7Z7K0 106 aa16.33■□□□□ 0.2
PMF1-206ENST00000606952 SLC41A1Q8IVJ1 513 aa16.33■□□□□ 0.2
PMF1-206ENST00000606952 GPATCH11Q8N954 259 aa16.33■□□□□ 0.2
PMF1-206ENST00000606952 CCDC97Q96F63 343 aaPredicted RBP16.33■□□□□ 0.2
PMF1-206ENST00000606952 ATXN7L3BQ96GX2 97 aa16.33■□□□□ 0.2
PMF1-206ENST00000606952 ELMO2Q96JJ3 720 aa16.33■□□□□ 0.2
PMF1-206ENST00000606952 BOCQ9BWV1 1114 aa16.33■□□□□ 0.2
PMF1-206ENST00000606952 TEX101Q9BY14 249 aa16.33■□□□□ 0.2
PMF1-206ENST00000606952 CLPBQ9H078 707 aa16.33■□□□□ 0.2
PMF1-206ENST00000606952 EPHX3Q9H6B9 360 aa16.33■□□□□ 0.2
PMF1-206ENST00000606952 PRMT8Q9NR22 394 aaPredicted RBP16.33■□□□□ 0.2
PMF1-206ENST00000606952 SLC39A10Q9ULF5 831 aa16.33■□□□□ 0.2
PMF1-206ENST00000606952 OAS3Q9Y6K5 1087 aaKnown RBP16.33■□□□□ 0.2
PMF1-206ENST00000606952 TBC1D3DA0A087WVF3 549 aa16.32■□□□□ 0.2
PMF1-206ENST00000606952 TBC1D3IA0A087WXS9 549 aa16.32■□□□□ 0.2
PMF1-206ENST00000606952 TBC1D3EA0A087X179 549 aa16.32■□□□□ 0.2
PMF1-206ENST00000606952 A0A087X1B8 175 aa16.32■□□□□ 0.2
PMF1-206ENST00000606952 TBC1D3KA0A087X1G2 549 aa16.32■□□□□ 0.2
PMF1-206ENST00000606952 A0A096LPK6 155 aa16.32■□□□□ 0.2
PMF1-206ENST00000606952 UBA6A0AVT1 1052 aaPredicted RBP16.32■□□□□ 0.2
PMF1-206ENST00000606952 TBC1D3FA6NER0 549 aaPredicted RBP16.32■□□□□ 0.2
PMF1-206ENST00000606952 TBC1D3LB9A6J9 549 aa16.32■□□□□ 0.2
PMF1-206ENST00000606952 CFAP99D6REC4 459 aa16.32■□□□□ 0.2
PMF1-206ENST00000606952 K7ESM1 405 aa16.32■□□□□ 0.2
PMF1-206ENST00000606952 STK25O00506 426 aa16.32■□□□□ 0.2
PMF1-206ENST00000606952 SGTAO43765 313 aa16.32■□□□□ 0.2
PMF1-206ENST00000606952 PDGFBP01127 241 aaPredicted RBP16.32■□□□□ 0.2
PMF1-206ENST00000606952 C2P06681 752 aa16.32■□□□□ 0.2
PMF1-206ENST00000606952 GSTA1P08263 222 aa16.32■□□□□ 0.2
PMF1-206ENST00000606952 HOXC4P09017 264 aaPredicted RBP16.32■□□□□ 0.2
PMF1-206ENST00000606952 TBC1D3HP0C7X1 549 aa16.32■□□□□ 0.2
PMF1-206ENST00000606952 SLC35E2BP0CK96 405 aa16.32■□□□□ 0.2
PMF1-206ENST00000606952 CD6P30203 668 aa16.32■□□□□ 0.2
PMF1-206ENST00000606952 FMO4P31512 558 aa16.32■□□□□ 0.2
PMF1-206ENST00000606952 CRHR1P34998 444 aa16.32■□□□□ 0.2
PMF1-206ENST00000606952 IGFALSP35858 605 aa16.32■□□□□ 0.2
PMF1-206ENST00000606952 CDKN2DP55273 166 aa16.32■□□□□ 0.2
PMF1-206ENST00000606952 SGCGQ13326 291 aa16.32■□□□□ 0.2
PMF1-206ENST00000606952 TBC1D3GQ6DHY5 549 aa16.32■□□□□ 0.2
PMF1-206ENST00000606952 TBC1D3CQ6IPX1 549 aa16.32■□□□□ 0.2
PMF1-206ENST00000606952 CEP97Q8IW35 865 aa16.32■□□□□ 0.2
PMF1-206ENST00000606952 TBC1D3Q8IZP1 549 aaPredicted RBP16.32■□□□□ 0.2
PMF1-206ENST00000606952 C4orf33Q8N1A6 199 aa16.32■□□□□ 0.2
PMF1-206ENST00000606952 PGBD3Q8N328 593 aa16.32■□□□□ 0.2
PMF1-206ENST00000606952 ARFGAP2Q8N6H7 521 aa16.32■□□□□ 0.2
PMF1-206ENST00000606952 NDNQ99608 321 aa16.32■□□□□ 0.2
PMF1-206ENST00000606952 C1QTNF1Q9BXJ1 281 aa16.32■□□□□ 0.2
PMF1-206ENST00000606952 CCDC68Q9H2F9 335 aa16.32■□□□□ 0.2
PMF1-206ENST00000606952 CNOT10Q9H9A5 744 aaKnown RBP16.32■□□□□ 0.2
PMF1-206ENST00000606952 CAB39LQ9H9S4 337 aa16.32■□□□□ 0.2
PMF1-206ENST00000606952 TAS2R13Q9NYV9 303 aa16.32■□□□□ 0.2
PMF1-206ENST00000606952 PRSS21Q9Y6M0 314 aa16.32■□□□□ 0.2
PMF1-206ENST00000606952 GOLGA8CPA6NN73 597 aa16.31■□□□□ 0.2
PMF1-206ENST00000606952 TOR1BO14657 336 aa16.31■□□□□ 0.2
PMF1-206ENST00000606952 TM9SF1O15321 606 aa16.31■□□□□ 0.2
PMF1-206ENST00000606952 VEGFDO43915 354 aa16.31■□□□□ 0.2
PMF1-206ENST00000606952 GLRA3O75311 464 aa16.31■□□□□ 0.2
PMF1-206ENST00000606952 IGHV4-34P06331 123 aa16.31■□□□□ 0.2
PMF1-206ENST00000606952 RALBP11234 206 aa16.31■□□□□ 0.2
PMF1-206ENST00000606952 SKIV2L2P42285 1042 aaKnown RBP16.31■□□□□ 0.2
PMF1-206ENST00000606952 BCL7AQ4VC05 210 aa16.31■□□□□ 0.2
PMF1-206ENST00000606952 KHDC1Q4VXA5 237 aaKnown RBP16.31■□□□□ 0.2
PMF1-206ENST00000606952 TAF1BQ53T94 588 aaPredicted RBP16.31■□□□□ 0.2
PMF1-206ENST00000606952 KIAA0895LQ68EN5 471 aa16.31■□□□□ 0.2
PMF1-206ENST00000606952 UGT3A1Q6NUS8 523 aa16.31■□□□□ 0.2
PMF1-206ENST00000606952 FAM124AQ86V42 546 aa16.31■□□□□ 0.2
PMF1-206ENST00000606952 PLA2G15Q8NCC3 412 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms