RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 DYRK4Q9NR20 520 aa17.21■□□□□ 0.35
PPFIA3-207ENST00000602716 NKX1-2Q9UD57 310 aaPredicted RBP17.21■□□□□ 0.35
PPFIA3-207ENST00000602716 MED16Q9Y2X0 877 aa17.21■□□□□ 0.35
PPFIA3-207ENST00000602716 VCANP13611 3396 aa17.2■□□□□ 0.34
PPFIA3-207ENST00000602716 TRBV5-4A0A0C4DH59 114 aa17.2■□□□□ 0.34
PPFIA3-207ENST00000602716 SLC35E2BP0CK96 405 aa17.2■□□□□ 0.34
PPFIA3-207ENST00000602716 TYK2P29597 1187 aa17.2■□□□□ 0.34
PPFIA3-207ENST00000602716 CLCN5P51795 746 aa17.2■□□□□ 0.34
PPFIA3-207ENST00000602716 MRPS21P82921 87 aaKnown RBP17.2■□□□□ 0.34
PPFIA3-207ENST00000602716 STARD3Q14849 445 aa17.2■□□□□ 0.34
PPFIA3-207ENST00000602716 HECTD2Q5U5R9 776 aa17.2■□□□□ 0.34
PPFIA3-207ENST00000602716 TECPR1Q7Z6L1 1165 aa17.2■□□□□ 0.34
PPFIA3-207ENST00000602716 SERPINA9Q86WD7 417 aa17.2■□□□□ 0.34
PPFIA3-207ENST00000602716 FAM111AQ96PZ2 611 aa17.2■□□□□ 0.34
PPFIA3-207ENST00000602716 UNKQ9C0B0 810 aaKnown RBP17.2■□□□□ 0.34
PPFIA3-207ENST00000602716 FADS3Q9Y5Q0 445 aa17.2■□□□□ 0.34
PPFIA3-207ENST00000602716 MMP20O60882 483 aa17.2■□□□□ 0.34
PPFIA3-207ENST00000602716 TGDSO95455 350 aa17.2■□□□□ 0.34
PPFIA3-207ENST00000602716 C6P13671 934 aa17.2■□□□□ 0.34
PPFIA3-207ENST00000602716 GNAZP19086 355 aa17.2■□□□□ 0.34
PPFIA3-207ENST00000602716 ITGALP20701 1170 aa17.2■□□□□ 0.34
PPFIA3-207ENST00000602716 CTSL3PQ5NE16 218 aa17.2■□□□□ 0.34
PPFIA3-207ENST00000602716 WASHC2DQ5SRD0 308 aa17.2■□□□□ 0.34
PPFIA3-207ENST00000602716 FAM46CQ5VWP2 391 aa17.2■□□□□ 0.34
PPFIA3-207ENST00000602716 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.2■□□□□ 0.34
PPFIA3-207ENST00000602716 SNX20Q7Z614 316 aa17.2■□□□□ 0.34
PPFIA3-207ENST00000602716 TMPRSS6Q8IU80 811 aa17.2■□□□□ 0.34
PPFIA3-207ENST00000602716 HDDC3Q8N4P3 179 aa17.2■□□□□ 0.34
PPFIA3-207ENST00000602716 FLCNQ8NFG4 579 aa17.2■□□□□ 0.34
PPFIA3-207ENST00000602716 COQ10AQ96MF6 247 aa17.2■□□□□ 0.34
PPFIA3-207ENST00000602716 BIRC8Q96P09 236 aa17.2■□□□□ 0.34
PPFIA3-207ENST00000602716 FOXQ1Q9C009 403 aa17.2■□□□□ 0.34
PPFIA3-207ENST00000602716 KCNK13Q9HB14 408 aa17.2■□□□□ 0.34
PPFIA3-207ENST00000602716 PKD2L2Q9NZM6 624 aa17.2■□□□□ 0.34
PPFIA3-207ENST00000602716 THEGQ9P2T0 379 aa17.2■□□□□ 0.34
PPFIA3-207ENST00000602716 SORCS3Q9UPU3 1222 aa17.2■□□□□ 0.34
PPFIA3-207ENST00000602716 A0A096LPK6 155 aa17.19■□□□□ 0.34
PPFIA3-207ENST00000602716 FADS2P1A8MWK0 482 aa17.19■□□□□ 0.34
PPFIA3-207ENST00000602716 C2P06681 752 aa17.19■□□□□ 0.34
PPFIA3-207ENST00000602716 CHRNB1P11230 501 aa17.19■□□□□ 0.34
PPFIA3-207ENST00000602716 CALB2P22676 271 aa17.19■□□□□ 0.34
PPFIA3-207ENST00000602716 FMO4P31512 558 aa17.19■□□□□ 0.34
PPFIA3-207ENST00000602716 GAS6Q14393 721 aa17.19■□□□□ 0.34
PPFIA3-207ENST00000602716 ACOX1Q15067 660 aa17.19■□□□□ 0.34
PPFIA3-207ENST00000602716 SDE2Q6IQ49 451 aa17.19■□□□□ 0.34
PPFIA3-207ENST00000602716 C16orf46Q6P387 395 aa17.19■□□□□ 0.34
PPFIA3-207ENST00000602716 SDCCAG8Q86SQ7 713 aaPredicted RBP17.19■□□□□ 0.34
PPFIA3-207ENST00000602716 SPATA6LQ8N4H0 392 aa17.19■□□□□ 0.34
PPFIA3-207ENST00000602716 MSANTD3Q96H12 275 aa17.19■□□□□ 0.34
PPFIA3-207ENST00000602716 PLEKHG4BQ96PX9 1271 aa17.19■□□□□ 0.34
PPFIA3-207ENST00000602716 RIOK2Q9BVS4 552 aaKnown RBP17.19■□□□□ 0.34
PPFIA3-207ENST00000602716 INTS10Q9NVR2 710 aaKnown RBP17.19■□□□□ 0.34
PPFIA3-207ENST00000602716 GALPQ9UBC7 116 aa17.19■□□□□ 0.34
PPFIA3-207ENST00000602716 MBD1Q9UIS9 605 aaPredicted RBP17.19■□□□□ 0.34
PPFIA3-207ENST00000602716 APPL1Q9UKG1 709 aa17.19■□□□□ 0.34
PPFIA3-207ENST00000602716 EMCNQ9ULC0 261 aa17.19■□□□□ 0.34
PPFIA3-207ENST00000602716 PRSS21Q9Y6M0 314 aa17.19■□□□□ 0.34
PPFIA3-207ENST00000602716 A0A0G2JND7 137 aa17.18■□□□□ 0.34
PPFIA3-207ENST00000602716 COPEO14579 308 aa17.18■□□□□ 0.34
PPFIA3-207ENST00000602716 NDUFS3O75489 264 aa17.18■□□□□ 0.34
PPFIA3-207ENST00000602716 RNASEH2AO75792 299 aaKnown RBP17.18■□□□□ 0.34
PPFIA3-207ENST00000602716 ADH1BP00325 375 aa17.18■□□□□ 0.34
PPFIA3-207ENST00000602716 C5AR1P21730 350 aa17.18■□□□□ 0.34
PPFIA3-207ENST00000602716 BGNP21810 368 aa17.18■□□□□ 0.34
PPFIA3-207ENST00000602716 SERPINB4P48594 390 aa17.18■□□□□ 0.34
PPFIA3-207ENST00000602716 DLG1Q12959 904 aa17.18■□□□□ 0.34
PPFIA3-207ENST00000602716 TMEM31Q5JXX7 168 aa17.18■□□□□ 0.34
PPFIA3-207ENST00000602716 HENMT1Q5T8I9 393 aaKnown RBP17.18■□□□□ 0.34
PPFIA3-207ENST00000602716 KCNV2Q8TDN2 545 aa17.18■□□□□ 0.34
PPFIA3-207ENST00000602716 SKA1Q96BD8 255 aa17.18■□□□□ 0.34
PPFIA3-207ENST00000602716 PTCD3Q96EY7 689 aaKnown RBP17.18■□□□□ 0.34
PPFIA3-207ENST00000602716 ANKRD27Q96NW4 1050 aa17.18■□□□□ 0.34
PPFIA3-207ENST00000602716 AARSD1Q9BTE6 412 aaKnown RBP17.18■□□□□ 0.34
PPFIA3-207ENST00000602716 MKS1Q9NXB0 559 aa17.18■□□□□ 0.34
PPFIA3-207ENST00000602716 HEY2Q9UBP5 337 aa17.18■□□□□ 0.34
PPFIA3-207ENST00000602716 CRLS1Q9UJA2 301 aa17.18■□□□□ 0.34
PPFIA3-207ENST00000602716 MMP17Q9ULZ9 603 aa17.18■□□□□ 0.34
PPFIA3-207ENST00000602716 PLXNA2O75051 1894 aa17.18■□□□□ 0.34
PPFIA3-207ENST00000602716 C19orf67A6NJJ6 358 aa17.18■□□□□ 0.34
PPFIA3-207ENST00000602716 IQCF5A8MTL0 148 aa17.18■□□□□ 0.34
PPFIA3-207ENST00000602716 NEMP1O14524 444 aa17.18■□□□□ 0.34
PPFIA3-207ENST00000602716 RNASEH1O60930 286 aaKnown RBP17.18■□□□□ 0.34
PPFIA3-207ENST00000602716 NIPSNAP2O75323 286 aa17.18■□□□□ 0.34
PPFIA3-207ENST00000602716 MTX2O75431 263 aa17.18■□□□□ 0.34
PPFIA3-207ENST00000602716 NDUFV2P19404 249 aa17.18■□□□□ 0.34
PPFIA3-207ENST00000602716 ACRV1P26436 265 aa17.18■□□□□ 0.34
PPFIA3-207ENST00000602716 ARFIP2P53365 341 aa17.18■□□□□ 0.34
PPFIA3-207ENST00000602716 B4GALNT1Q00973 533 aa17.18■□□□□ 0.34
PPFIA3-207ENST00000602716 ELP6Q0PNE2 266 aa17.18■□□□□ 0.34
PPFIA3-207ENST00000602716 TMEM52BQ4KMG9 183 aa17.18■□□□□ 0.34
PPFIA3-207ENST00000602716 KHDC1Q4VXA5 237 aaKnown RBP17.18■□□□□ 0.34
PPFIA3-207ENST00000602716 SETMARQ53H47 684 aaPredicted RBP17.18■□□□□ 0.34
PPFIA3-207ENST00000602716 TMEM207Q6UWW9 146 aa17.18■□□□□ 0.34
PPFIA3-207ENST00000602716 ZNF852Q6ZMS4 543 aa17.18■□□□□ 0.34
PPFIA3-207ENST00000602716 TRMT11Q7Z4G4 463 aaKnown RBP17.18■□□□□ 0.34
PPFIA3-207ENST00000602716 CLEC14AQ86T13 490 aa17.18■□□□□ 0.34
PPFIA3-207ENST00000602716 CENPLQ8N0S6 344 aaPredicted RBP17.18■□□□□ 0.34
PPFIA3-207ENST00000602716 NXPE1Q8N323 547 aa17.18■□□□□ 0.34
PPFIA3-207ENST00000602716 ENDOVQ8N8Q3 282 aaKnown RBP17.18■□□□□ 0.34
PPFIA3-207ENST00000602716 LKAAEAR1Q8TD35 194 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms