RNA–Protein interactions for RNA: ENST00000601665.5

NUP62-223, Transcript of nucleoporin 62, human

TSL 5

Gene NUP62, Length 531 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP62-223	ENST00000601665	NUDT9	Q9BW91	350 aa		12.1	□□□□□ -0.47
NUP62-223	ENST00000601665	UNK	Q9C0B0	810 aa	Known RBP	12.1	□□□□□ -0.47
NUP62-223	ENST00000601665	ILKAP	Q9H0C8	392 aa	Predicted RBP	12.1	□□□□□ -0.47
NUP62-223	ENST00000601665	VPS16	Q9H269	839 aa		12.1	□□□□□ -0.47
NUP62-223	ENST00000601665	KLC4	Q9NSK0	619 aa		12.1	□□□□□ -0.47
NUP62-223	ENST00000601665	NOCT	Q9UK39	431 aa	Known RBP	12.1	□□□□□ -0.47
NUP62-223	ENST00000601665	ADGRG4	Q8IZF6	3080 aa		12.1	□□□□□ -0.47
NUP62-223	ENST00000601665		F5H423	210 aa	Predicted RBP	12.09	□□□□□ -0.47
NUP62-223	ENST00000601665	GRID2	O43424	1007 aa		12.09	□□□□□ -0.47
NUP62-223	ENST00000601665	CPNE3	O75131	537 aa	Known RBP	12.09	□□□□□ -0.47
NUP62-223	ENST00000601665	CEACAM4	O75871	244 aa		12.09	□□□□□ -0.47
NUP62-223	ENST00000601665	KLK3	P07288	261 aa	Predicted RBP	12.09	□□□□□ -0.47
NUP62-223	ENST00000601665	ERCC2	P18074	760 aa		12.09	□□□□□ -0.47
NUP62-223	ENST00000601665	XRCC1	P18887	633 aa	Predicted RBP	12.09	□□□□□ -0.47
NUP62-223	ENST00000601665	LPO	P22079	712 aa	Predicted RBP	12.09	□□□□□ -0.47
NUP62-223	ENST00000601665	RRAD	P55042	308 aa		12.09	□□□□□ -0.47
NUP62-223	ENST00000601665	MAX	P61244	160 aa		12.09	□□□□□ -0.47
NUP62-223	ENST00000601665	FMO1	Q01740	532 aa		12.09	□□□□□ -0.47
NUP62-223	ENST00000601665	ACY1	Q03154	408 aa		12.09	□□□□□ -0.47
NUP62-223	ENST00000601665	RAPSN	Q13702	412 aa		12.09	□□□□□ -0.47
NUP62-223	ENST00000601665	SEPT7	Q16181	437 aa	Known RBP	12.09	□□□□□ -0.47
NUP62-223	ENST00000601665	ZXDC	Q2QGD7	858 aa	Predicted RBP	12.09	□□□□□ -0.47
NUP62-223	ENST00000601665	RALGPS1	Q5JS13	557 aa		12.09	□□□□□ -0.47
NUP62-223	ENST00000601665	LYPLAL1	Q5VWZ2	237 aa		12.09	□□□□□ -0.47
NUP62-223	ENST00000601665	BPHL	Q86WA6	291 aa	Predicted RBP	12.09	□□□□□ -0.47
NUP62-223	ENST00000601665	TMEM126B	Q8IUX1	230 aa		12.09	□□□□□ -0.47
NUP62-223	ENST00000601665	ARHGAP12	Q8IWW6	846 aa		12.09	□□□□□ -0.47
NUP62-223	ENST00000601665	KLHL6	Q8WZ60	621 aa		12.09	□□□□□ -0.47
NUP62-223	ENST00000601665	RSC1A1	Q92681	617 aa		12.09	□□□□□ -0.47
NUP62-223	ENST00000601665	NAA15	Q9BXJ9	866 aa	Known RBP	12.09	□□□□□ -0.47
NUP62-223	ENST00000601665	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	12.09	□□□□□ -0.47
NUP62-223	ENST00000601665	WASH6P	Q9NQA3	447 aa		12.09	□□□□□ -0.47
NUP62-223	ENST00000601665	DNPEP	Q9ULA0	475 aa		12.09	□□□□□ -0.47
NUP62-223	ENST00000601665	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	12.09	□□□□□ -0.47
NUP62-223	ENST00000601665	COPG1	Q9Y678	874 aa	Known RBP	12.09	□□□□□ -0.47
NUP62-223	ENST00000601665	SLC30A1	Q9Y6M5	507 aa		12.09	□□□□□ -0.47
NUP62-223	ENST00000601665	CELSR1	Q9NYQ6	3014 aa		12.09	□□□□□ -0.47
NUP62-223	ENST00000601665	PDZD2	O15018	2839 aa		12.09	□□□□□ -0.47
NUP62-223	ENST00000601665	NF1	P21359	2839 aa		12.09	□□□□□ -0.47
NUP62-223	ENST00000601665	POLE	Q07864	2286 aa		12.08	□□□□□ -0.48
NUP62-223	ENST00000601665	LRRTM2	O43300	516 aa		12.08	□□□□□ -0.48
NUP62-223	ENST00000601665	SCRG1	O75711	98 aa		12.08	□□□□□ -0.48
NUP62-223	ENST00000601665	ALPP	P05187	535 aa		12.08	□□□□□ -0.48
NUP62-223	ENST00000601665	GSC	P56915	257 aa	Predicted RBP	12.08	□□□□□ -0.48
NUP62-223	ENST00000601665	PTS	Q03393	145 aa		12.08	□□□□□ -0.48
NUP62-223	ENST00000601665	ITK	Q08881	620 aa		12.08	□□□□□ -0.48
NUP62-223	ENST00000601665	KCNAB1	Q14722	419 aa		12.08	□□□□□ -0.48
NUP62-223	ENST00000601665	INSC	Q1MX18	579 aa		12.08	□□□□□ -0.48
NUP62-223	ENST00000601665	PLEKHN1	Q494U1	663 aa	Predicted RBP	12.08	□□□□□ -0.48
NUP62-223	ENST00000601665	TDRD12	Q587J7	1177 aa	Known RBP	12.08	□□□□□ -0.48
NUP62-223	ENST00000601665	SP5	Q6BEB4	398 aa	Predicted RBP	12.08	□□□□□ -0.48
NUP62-223	ENST00000601665	MED25	Q71SY5	747 aa		12.08	□□□□□ -0.48
NUP62-223	ENST00000601665	TTC30B	Q8N4P2	665 aa		12.08	□□□□□ -0.48
NUP62-223	ENST00000601665	ARFGAP1	Q8N6T3	406 aa		12.08	□□□□□ -0.48
NUP62-223	ENST00000601665	NPW	Q8N729	165 aa		12.08	□□□□□ -0.48
NUP62-223	ENST00000601665	TMEM102	Q8N9M5	508 aa	Predicted RBP	12.08	□□□□□ -0.48
NUP62-223	ENST00000601665	UBXN4	Q92575	508 aa		12.08	□□□□□ -0.48
NUP62-223	ENST00000601665	CXorf40B	Q96DE9	158 aa		12.08	□□□□□ -0.48
NUP62-223	ENST00000601665	SGSM3	Q96HU1	749 aa		12.08	□□□□□ -0.48
NUP62-223	ENST00000601665	TUBGCP2	Q9BSJ2	902 aa		12.08	□□□□□ -0.48
NUP62-223	ENST00000601665	MLPH	Q9BV36	600 aa	Predicted RBP	12.08	□□□□□ -0.48
NUP62-223	ENST00000601665	CARD9	Q9H257	536 aa		12.08	□□□□□ -0.48
NUP62-223	ENST00000601665	AGPAT4	Q9NRZ5	378 aa		12.08	□□□□□ -0.48
NUP62-223	ENST00000601665	TMEM63C	Q9P1W3	806 aa		12.08	□□□□□ -0.48
NUP62-223	ENST00000601665	B3GNT3	Q9Y2A9	372 aa		12.08	□□□□□ -0.48
NUP62-223	ENST00000601665	SIK3	Q9Y2K2	1263 aa		12.08	□□□□□ -0.48
NUP62-223	ENST00000601665	HIVEP1	P15822	2718 aa		12.08	□□□□□ -0.48
NUP62-223	ENST00000601665	PRSS44	E7EML9	344 aa		12.07	□□□□□ -0.48
NUP62-223	ENST00000601665	NUAK1	O60285	661 aa		12.07	□□□□□ -0.48
NUP62-223	ENST00000601665	EBLN1	P0CF75	366 aa		12.07	□□□□□ -0.48
NUP62-223	ENST00000601665	FOLR1	P15328	257 aa		12.07	□□□□□ -0.48
NUP62-223	ENST00000601665	CHRNB2	P17787	502 aa		12.07	□□□□□ -0.48
NUP62-223	ENST00000601665	SLC19A1	P41440	591 aa		12.07	□□□□□ -0.48
NUP62-223	ENST00000601665	MMP13	P45452	471 aa		12.07	□□□□□ -0.48
NUP62-223	ENST00000601665	VAV2	P52735	878 aa		12.07	□□□□□ -0.48
NUP62-223	ENST00000601665	STC1	P52823	247 aa		12.07	□□□□□ -0.48
NUP62-223	ENST00000601665	RPL7A	P62424	266 aa	Known RBP	12.07	□□□□□ -0.48
NUP62-223	ENST00000601665	PTP4A2	Q12974	167 aa		12.07	□□□□□ -0.48
NUP62-223	ENST00000601665	PLA2G4E	Q3MJ16	856 aa		12.07	□□□□□ -0.48
NUP62-223	ENST00000601665	HSP90AA4P	Q58FG1	418 aa		12.07	□□□□□ -0.48
NUP62-223	ENST00000601665	PPP1R15B	Q5SWA1	713 aa		12.07	□□□□□ -0.48
NUP62-223	ENST00000601665	ERMARD	Q5T6L9	678 aa		12.07	□□□□□ -0.48
NUP62-223	ENST00000601665	VWA5B1	Q5TIE3	1220 aa		12.07	□□□□□ -0.48
NUP62-223	ENST00000601665	MARC1	Q5VT66	337 aa		12.07	□□□□□ -0.48
NUP62-223	ENST00000601665	DPY19L2P1	Q6NXN4	242 aa		12.07	□□□□□ -0.48
NUP62-223	ENST00000601665	KLHL35	Q6PF15	583 aa		12.07	□□□□□ -0.48
NUP62-223	ENST00000601665	PHF13	Q86YI8	300 aa	Predicted RBP	12.07	□□□□□ -0.48
NUP62-223	ENST00000601665	PGBD5	Q8N414	524 aa		12.07	□□□□□ -0.48
NUP62-223	ENST00000601665	ATPAF2	Q8N5M1	289 aa		12.07	□□□□□ -0.48
NUP62-223	ENST00000601665	AOPEP	Q8N6M6	819 aa		12.07	□□□□□ -0.48
NUP62-223	ENST00000601665	ENDOV	Q8N8Q3	282 aa	Known RBP	12.07	□□□□□ -0.48
NUP62-223	ENST00000601665	PIH1D2	Q8WWB5	315 aa		12.07	□□□□□ -0.48
NUP62-223	ENST00000601665	ZNF514	Q96K75	400 aa	Predicted RBP	12.07	□□□□□ -0.48
NUP62-223	ENST00000601665	SMAD5	Q99717	465 aa	Known RBP	12.07	□□□□□ -0.48
NUP62-223	ENST00000601665	MGME1	Q9BQP7	344 aa		12.07	□□□□□ -0.48
NUP62-223	ENST00000601665	FAM83D	Q9H4H8	585 aa		12.07	□□□□□ -0.48
NUP62-223	ENST00000601665	FGF21	Q9NSA1	209 aa		12.07	□□□□□ -0.48
NUP62-223	ENST00000601665	POT1	Q9NUX5	634 aa		12.07	□□□□□ -0.48
NUP62-223	ENST00000601665	SCHIP1	Q9P0W5	487 aa	Predicted RBP	12.07	□□□□□ -0.48
NUP62-223	ENST00000601665	C5AR2	Q9P296	337 aa		12.07	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms