RNA–Protein interactions for RNA: ENST00000601032.5

LTBP4-229, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 1 (best)

Gene LTBP4, Length 2,019 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-229ENST00000601032 SPATA2LQ8IUW3 424 aaPredicted RBP16.79■□□□□ 0.28
LTBP4-229ENST00000601032 NUDCD3Q8IVD9 361 aa16.79■□□□□ 0.28
LTBP4-229ENST00000601032 SCN4BQ8IWT1 228 aa16.79■□□□□ 0.28
LTBP4-229ENST00000601032 PLPP6Q8IY26 295 aa16.79■□□□□ 0.28
LTBP4-229ENST00000601032 SAMD14Q8IZD0 417 aaPredicted RBP16.79■□□□□ 0.28
LTBP4-229ENST00000601032 FBXL6Q8N531 539 aa16.79■□□□□ 0.28
LTBP4-229ENST00000601032 LHFPL5Q8TAF8 219 aa16.79■□□□□ 0.28
LTBP4-229ENST00000601032 RNF34Q969K3 372 aa16.79■□□□□ 0.28
LTBP4-229ENST00000601032 BCL7BQ9BQE9 202 aa16.79■□□□□ 0.28
LTBP4-229ENST00000601032 EBF4Q9BQW3 602 aa16.79■□□□□ 0.28
LTBP4-229ENST00000601032 ACAT2Q9BWD1 397 aa16.79■□□□□ 0.28
LTBP4-229ENST00000601032 NAA50Q9GZZ1 169 aaKnown RBP16.79■□□□□ 0.28
LTBP4-229ENST00000601032 KLHL8Q9P2G9 620 aaPredicted RBP16.79■□□□□ 0.28
LTBP4-229ENST00000601032 VPS4AQ9UN37 437 aa16.79■□□□□ 0.28
LTBP4-229ENST00000601032 PSAT1Q9Y617 370 aa16.79■□□□□ 0.28
LTBP4-229ENST00000601032 A0A1W2PQH9 124 aa16.79■□□□□ 0.28
LTBP4-229ENST00000601032 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.79■□□□□ 0.28
LTBP4-229ENST00000601032 CSTF2P33240 577 aaKnown RBP eCLIP16.79■□□□□ 0.28
LTBP4-229ENST00000601032 GMPRP36959 345 aa16.79■□□□□ 0.28
LTBP4-229ENST00000601032 GRIA3P42263 894 aa16.79■□□□□ 0.28
LTBP4-229ENST00000601032 RAD23AP54725 363 aa16.79■□□□□ 0.28
LTBP4-229ENST00000601032 SMARCB1Q12824 385 aa16.79■□□□□ 0.28
LTBP4-229ENST00000601032 ILF2Q12905 390 aaKnown RBP16.79■□□□□ 0.28
LTBP4-229ENST00000601032 CHI3L2Q15782 390 aa16.79■□□□□ 0.28
LTBP4-229ENST00000601032 NRF1Q16656 503 aa16.79■□□□□ 0.28
LTBP4-229ENST00000601032 DDR2Q16832 855 aa16.79■□□□□ 0.28
LTBP4-229ENST00000601032 TEDDM1Q5T9Z0 273 aa16.79■□□□□ 0.28
LTBP4-229ENST00000601032 MROH9Q5TGP6 573 aa16.79■□□□□ 0.28
LTBP4-229ENST00000601032 C1orf53Q5VUE5 145 aa16.79■□□□□ 0.28
LTBP4-229ENST00000601032 ZCCHC7Q8N3Z6 543 aaKnown RBP16.79■□□□□ 0.28
LTBP4-229ENST00000601032 CARNMT1Q8N4J0 409 aa16.79■□□□□ 0.28
LTBP4-229ENST00000601032 BEND7Q8N7W2 519 aaPredicted RBP16.79■□□□□ 0.28
LTBP4-229ENST00000601032 PIWIL2Q8TC59 973 aaKnown RBP16.79■□□□□ 0.28
LTBP4-229ENST00000601032 GPR152Q8TDT2 470 aa16.79■□□□□ 0.28
LTBP4-229ENST00000601032 FIG4Q92562 907 aa16.79■□□□□ 0.28
LTBP4-229ENST00000601032 FCRL3Q96P31 734 aaPredicted RBP16.79■□□□□ 0.28
LTBP4-229ENST00000601032 DEPDC7Q96QD5 511 aa16.79■□□□□ 0.28
LTBP4-229ENST00000601032 APOL2Q9BQE5 337 aa16.79■□□□□ 0.28
LTBP4-229ENST00000601032 EIF2B3Q9NR50 452 aaKnown RBP16.79■□□□□ 0.28
LTBP4-229ENST00000601032 DUS2Q9NX74 493 aaKnown RBP16.79■□□□□ 0.28
LTBP4-229ENST00000601032 AP3M1Q9Y2T2 418 aa16.79■□□□□ 0.28
LTBP4-229ENST00000601032 PCDHGB3Q9Y5G1 929 aa16.79■□□□□ 0.28
LTBP4-229ENST00000601032 IRAK2O43187 625 aa16.78■□□□□ 0.28
LTBP4-229ENST00000601032 NDUFA2O43678 99 aa16.78■□□□□ 0.28
LTBP4-229ENST00000601032 SOAT2O75908 522 aa16.78■□□□□ 0.28
LTBP4-229ENST00000601032 F9P00740 461 aa16.78■□□□□ 0.28
LTBP4-229ENST00000601032 SNRPAP09012 282 aaKnown RBP16.78■□□□□ 0.28
LTBP4-229ENST00000601032 ME2P23368 584 aa16.78■□□□□ 0.28
LTBP4-229ENST00000601032 GARSP41250 739 aaKnown RBP16.78■□□□□ 0.28
LTBP4-229ENST00000601032 TRAP1Q12931 704 aaKnown RBP16.78■□□□□ 0.28
LTBP4-229ENST00000601032 KRR1Q13601 381 aaKnown RBP16.78■□□□□ 0.28
LTBP4-229ENST00000601032 PDPK2PQ6A1A2 396 aa16.78■□□□□ 0.28
LTBP4-229ENST00000601032 SYCE2Q6PIF2 218 aa16.78■□□□□ 0.28
LTBP4-229ENST00000601032 SCML4Q8N228 414 aa16.78■□□□□ 0.28
LTBP4-229ENST00000601032 MFSD4AQ8N468 514 aa16.78■□□□□ 0.28
LTBP4-229ENST00000601032 BHLHE22Q8NFJ8 381 aaPredicted RBP16.78■□□□□ 0.28
LTBP4-229ENST00000601032 OMA1Q96E52 524 aa16.78■□□□□ 0.28
LTBP4-229ENST00000601032 BTN2A3PQ96KV6 586 aa16.78■□□□□ 0.28
LTBP4-229ENST00000601032 MAGED2Q9UNF1 606 aaPredicted RBP16.78■□□□□ 0.28
LTBP4-229ENST00000601032 NBNO60934 754 aa16.77■□□□□ 0.28
LTBP4-229ENST00000601032 CCNKO75909 580 aa16.77■□□□□ 0.28
LTBP4-229ENST00000601032 MLNP12872 115 aa16.77■□□□□ 0.28
LTBP4-229ENST00000601032 SHEQ5VZ18 495 aa16.77■□□□□ 0.28
LTBP4-229ENST00000601032 BTLAQ7Z6A9 289 aa16.77■□□□□ 0.28
LTBP4-229ENST00000601032 ARHGAP12Q8IWW6 846 aa16.77■□□□□ 0.28
LTBP4-229ENST00000601032 ANKFN1Q8N957 763 aa16.77■□□□□ 0.28
LTBP4-229ENST00000601032 ANKRD49Q8WVL7 239 aa16.77■□□□□ 0.28
LTBP4-229ENST00000601032 MECRQ9BV79 373 aa16.77■□□□□ 0.28
LTBP4-229ENST00000601032 MRPL40Q9NQ50 206 aaKnown RBP16.77■□□□□ 0.28
LTBP4-229ENST00000601032 UBP1Q9NZI7 540 aa16.77■□□□□ 0.28
LTBP4-229ENST00000601032 SLC27A5Q9Y2P5 690 aa16.77■□□□□ 0.28
LTBP4-229ENST00000601032 NYNRINQ9P2P1 1898 aaKnown RBP16.77■□□□□ 0.28
LTBP4-229ENST00000601032 PAGE1O75459 146 aa16.77■□□□□ 0.27
LTBP4-229ENST00000601032 ALDH1A2O94788 518 aa16.77■□□□□ 0.27
LTBP4-229ENST00000601032 EOMESO95936 686 aa16.77■□□□□ 0.27
LTBP4-229ENST00000601032 NELFEP18615 380 aaKnown RBP16.77■□□□□ 0.27
LTBP4-229ENST00000601032 NFKB1P19838 968 aa16.77■□□□□ 0.27
LTBP4-229ENST00000601032 HLCSP50747 726 aa16.77■□□□□ 0.27
LTBP4-229ENST00000601032 GNA13Q14344 377 aa16.77■□□□□ 0.27
LTBP4-229ENST00000601032 PLA2G4EQ3MJ16 856 aa16.77■□□□□ 0.27
LTBP4-229ENST00000601032 KCTD11Q693B1 232 aa16.77■□□□□ 0.27
LTBP4-229ENST00000601032 TCAIMQ8N3R3 496 aa16.77■□□□□ 0.27
LTBP4-229ENST00000601032 CNTD1Q8N815 330 aa16.77■□□□□ 0.27
LTBP4-229ENST00000601032 PIK3C3Q8NEB9 887 aa16.77■□□□□ 0.27
LTBP4-229ENST00000601032 HDAC11Q96DB2 347 aa16.77■□□□□ 0.27
LTBP4-229ENST00000601032 TOX2Q96NM4 488 aa16.77■□□□□ 0.27
LTBP4-229ENST00000601032 TM9SF2Q99805 663 aa16.77■□□□□ 0.27
LTBP4-229ENST00000601032 TANC1Q9C0D5 1861 aa16.77■□□□□ 0.27
LTBP4-229ENST00000601032 TNRC18O15417 2968 aaPredicted RBP16.77■□□□□ 0.27
LTBP4-229ENST00000601032 CEP290O15078 2479 aa16.76■□□□□ 0.27
LTBP4-229ENST00000601032 ERVH48-1M5A8F1 160 aa16.76■□□□□ 0.27
LTBP4-229ENST00000601032 PLOD2O00469 737 aa16.76■□□□□ 0.27
LTBP4-229ENST00000601032 SLC22A2O15244 555 aa16.76■□□□□ 0.27
LTBP4-229ENST00000601032 PTTG1O95997 202 aa16.76■□□□□ 0.27
LTBP4-229ENST00000601032 JCHAINP01591 159 aa16.76■□□□□ 0.27
LTBP4-229ENST00000601032 ERVK-10P10266 1014 aa16.76■□□□□ 0.27
LTBP4-229ENST00000601032 RALBP11234 206 aa16.76■□□□□ 0.27
LTBP4-229ENST00000601032 CD40LGP29965 261 aa16.76■□□□□ 0.27
LTBP4-229ENST00000601032 SNAP47Q5SQN1 464 aa16.76■□□□□ 0.27
LTBP4-229ENST00000601032 KYQ8NBH2 561 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms