RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 EOMESO95936 686 aa20.06■□□□□ 0.8
SHKBP1-225ENST00000600733 CCND3P30281 292 aaPredicted RBP20.06■□□□□ 0.8
SHKBP1-225ENST00000600733 MBTPS1Q14703 1052 aa20.06■□□□□ 0.8
SHKBP1-225ENST00000600733 RBBP7Q16576 425 aa20.06■□□□□ 0.8
SHKBP1-225ENST00000600733 COQ5Q5HYK3 327 aa20.06■□□□□ 0.8
SHKBP1-225ENST00000600733 FAM26DQ5JW98 314 aa20.06■□□□□ 0.8
SHKBP1-225ENST00000600733 KIAA2013Q8IYS2 634 aa20.06■□□□□ 0.8
SHKBP1-225ENST00000600733 ALDH16A1Q8IZ83 802 aa20.06■□□□□ 0.8
SHKBP1-225ENST00000600733 PACRGLQ8N7B6 248 aa20.06■□□□□ 0.8
SHKBP1-225ENST00000600733 HM13Q8TCT9 377 aa20.06■□□□□ 0.8
SHKBP1-225ENST00000600733 CENPNQ96H22 339 aaPredicted RBP20.06■□□□□ 0.8
SHKBP1-225ENST00000600733 PHF12Q96QT6 1004 aa20.06■□□□□ 0.8
SHKBP1-225ENST00000600733 HGH1Q9BTY7 390 aa20.06■□□□□ 0.8
SHKBP1-225ENST00000600733 CINPQ9BW66 212 aaPredicted RBP20.06■□□□□ 0.8
SHKBP1-225ENST00000600733 SEPT3Q9UH03 358 aa20.06■□□□□ 0.8
SHKBP1-225ENST00000600733 HEMK1Q9Y5R4 338 aaPredicted RBP20.06■□□□□ 0.8
SHKBP1-225ENST00000600733 ZFP37Q9Y6Q3 630 aaPredicted RBP20.06■□□□□ 0.8
SHKBP1-225ENST00000600733 SYCE1LA8MT33 242 aa20.06■□□□□ 0.8
SHKBP1-225ENST00000600733 VNN2O95498 520 aa20.06■□□□□ 0.8
SHKBP1-225ENST00000600733 ESRRBO95718 433 aa20.06■□□□□ 0.8
SHKBP1-225ENST00000600733 PRLP01236 227 aa20.06■□□□□ 0.8
SHKBP1-225ENST00000600733 MT-ND1P03886 318 aa20.06■□□□□ 0.8
SHKBP1-225ENST00000600733 HK3P52790 923 aa20.06■□□□□ 0.8
SHKBP1-225ENST00000600733 RPS24P62847 133 aaKnown RBP20.06■□□□□ 0.8
SHKBP1-225ENST00000600733 LIPEQ05469 1076 aa20.06■□□□□ 0.8
SHKBP1-225ENST00000600733 FOXM1Q08050 763 aa20.06■□□□□ 0.8
SHKBP1-225ENST00000600733 MERTKQ12866 999 aa20.06■□□□□ 0.8
SHKBP1-225ENST00000600733 XKR7Q5GH72 579 aa20.06■□□□□ 0.8
SHKBP1-225ENST00000600733 RNF19BQ6ZMZ0 732 aa20.06■□□□□ 0.8
SHKBP1-225ENST00000600733 SPATA19Q7Z5L4 167 aa20.06■□□□□ 0.8
SHKBP1-225ENST00000600733 PSKH2Q96QS6 385 aa20.06■□□□□ 0.8
SHKBP1-225ENST00000600733 KCTD14Q9BQ13 255 aaPredicted RBP20.06■□□□□ 0.8
SHKBP1-225ENST00000600733 PIF1Q9H611 641 aa20.06■□□□□ 0.8
SHKBP1-225ENST00000600733 MTMR11A4FU01 709 aa20.05■□□□□ 0.8
SHKBP1-225ENST00000600733 SYN3O14994 580 aa20.05■□□□□ 0.8
SHKBP1-225ENST00000600733 TSPAN12O95859 305 aa20.05■□□□□ 0.8
SHKBP1-225ENST00000600733 FLT3LGP49771 235 aa20.05■□□□□ 0.8
SHKBP1-225ENST00000600733 CDK9P50750 372 aaKnown RBP20.05■□□□□ 0.8
SHKBP1-225ENST00000600733 TUBA4AP68366 448 aa20.05■□□□□ 0.8
SHKBP1-225ENST00000600733 TAF1AQ15573 450 aaPredicted RBP20.05■□□□□ 0.8
SHKBP1-225ENST00000600733 ATP6AP1Q15904 470 aa20.05■□□□□ 0.8
SHKBP1-225ENST00000600733 TIGD2Q4W5G0 525 aa20.05■□□□□ 0.8
SHKBP1-225ENST00000600733 LRRC23Q53EV4 343 aaPredicted RBP20.05■□□□□ 0.8
SHKBP1-225ENST00000600733 TTC33Q6PID6 262 aaPredicted RBP20.05■□□□□ 0.8
SHKBP1-225ENST00000600733 TRPV3Q8NET8 790 aa20.05■□□□□ 0.8
SHKBP1-225ENST00000600733 EEF1AKMT1Q8WVE0 214 aa20.05■□□□□ 0.8
SHKBP1-225ENST00000600733 CDK15Q96Q40 435 aa20.05■□□□□ 0.8
SHKBP1-225ENST00000600733 INTS7Q9NVH2 962 aaKnown RBP20.05■□□□□ 0.8
SHKBP1-225ENST00000600733 UBA2Q9UBT2 640 aaPredicted RBP20.05■□□□□ 0.8
SHKBP1-225ENST00000600733 EIF2B4Q9UI10 523 aaKnown RBP20.05■□□□□ 0.8
SHKBP1-225ENST00000600733 TMCO1Q9UM00 188 aa20.05■□□□□ 0.8
SHKBP1-225ENST00000600733 PCDHGC4Q9Y5F7 938 aa20.05■□□□□ 0.8
SHKBP1-225ENST00000600733 MOXD2PA6NHM9 499 aa20.05■□□□□ 0.8
SHKBP1-225ENST00000600733 CCDC154A6NI56 674 aa20.05■□□□□ 0.8
SHKBP1-225ENST00000600733 ACOX3O15254 700 aa20.05■□□□□ 0.8
SHKBP1-225ENST00000600733 INSIG1O15503 277 aa20.05■□□□□ 0.8
SHKBP1-225ENST00000600733 SNX2O60749 519 aa20.05■□□□□ 0.8
SHKBP1-225ENST00000600733 SLC22A3O75751 556 aa20.05■□□□□ 0.8
SHKBP1-225ENST00000600733 UROSP10746 265 aa20.05■□□□□ 0.8
SHKBP1-225ENST00000600733 DUSP4Q13115 394 aa20.05■□□□□ 0.8
SHKBP1-225ENST00000600733 GPR162Q16538 588 aa20.05■□□□□ 0.8
SHKBP1-225ENST00000600733 CCSAPQ6IQ19 270 aaPredicted RBP20.05■□□□□ 0.8
SHKBP1-225ENST00000600733 BBS5Q8N3I7 341 aa20.05■□□□□ 0.8
SHKBP1-225ENST00000600733 LPCAT1Q8NF37 534 aa20.05■□□□□ 0.8
SHKBP1-225ENST00000600733 CYGBQ8WWM9 190 aa20.05■□□□□ 0.8
SHKBP1-225ENST00000600733 FBXL20Q96IG2 436 aa20.05■□□□□ 0.8
SHKBP1-225ENST00000600733 C9orf16Q9BUW7 83 aa20.05■□□□□ 0.8
SHKBP1-225ENST00000600733 BPIFA1Q9NP55 256 aa20.05■□□□□ 0.8
SHKBP1-225ENST00000600733 FKBPLQ9UIM3 349 aa20.05■□□□□ 0.8
SHKBP1-225ENST00000600733 V9GYQ6 96 aa20.05■□□□□ 0.8
SHKBP1-225ENST00000600733 TCRBV5S2A0A599 114 aa20.04■□□□□ 0.8
SHKBP1-225ENST00000600733 STX16O14662 325 aa20.04■□□□□ 0.8
SHKBP1-225ENST00000600733 EI24O14681 340 aa20.04■□□□□ 0.8
SHKBP1-225ENST00000600733 EEDO75530 441 aaKnown RBP20.04■□□□□ 0.8
SHKBP1-225ENST00000600733 C1RP00736 705 aa20.04■□□□□ 0.8
SHKBP1-225ENST00000600733 CKBP12277 381 aa20.04■□□□□ 0.8
SHKBP1-225ENST00000600733 MYF6P23409 242 aa20.04■□□□□ 0.8
SHKBP1-225ENST00000600733 IL12AP29459 219 aa20.04■□□□□ 0.8
SHKBP1-225ENST00000600733 CDYL2Q8N8U2 506 aa20.04■□□□□ 0.8
SHKBP1-225ENST00000600733 MAGEH1Q9H213 219 aa20.04■□□□□ 0.8
SHKBP1-225ENST00000600733 RRAGCQ9HB90 399 aa20.04■□□□□ 0.8
SHKBP1-225ENST00000600733 C2orf81A6NN90 581 aa20.04■□□□□ 0.8
SHKBP1-225ENST00000600733 GPR39O43194 453 aa20.04■□□□□ 0.8
SHKBP1-225ENST00000600733 KLK8O60259 260 aa20.04■□□□□ 0.8
SHKBP1-225ENST00000600733 BMP10O95393 424 aa20.04■□□□□ 0.8
SHKBP1-225ENST00000600733 CHEK2O96017 543 aa20.04■□□□□ 0.8
SHKBP1-225ENST00000600733 GPIP06744 558 aa20.04■□□□□ 0.8
SHKBP1-225ENST00000600733 POLR2JP52435 117 aaKnown RBP20.04■□□□□ 0.8
SHKBP1-225ENST00000600733 NKX3-2P78367 333 aa20.04■□□□□ 0.8
SHKBP1-225ENST00000600733 HPCAP84074 193 aa20.04■□□□□ 0.8
SHKBP1-225ENST00000600733 MRPL58Q14197 206 aaKnown RBP20.04■□□□□ 0.8
SHKBP1-225ENST00000600733 SLC36A3Q495N2 470 aa20.04■□□□□ 0.8
SHKBP1-225ENST00000600733 HABP4Q5JVS0 413 aaKnown RBP20.04■□□□□ 0.8
SHKBP1-225ENST00000600733 CTSL3PQ5NE16 218 aa20.04■□□□□ 0.8
SHKBP1-225ENST00000600733 TMEM199Q8N511 208 aa20.04■□□□□ 0.8
SHKBP1-225ENST00000600733 NKAPQ8N5F7 415 aaKnown RBP20.04■□□□□ 0.8
SHKBP1-225ENST00000600733 GOLM1Q8NBJ4 401 aa20.04■□□□□ 0.8
SHKBP1-225ENST00000600733 OR52B6Q8NGF0 335 aa20.04■□□□□ 0.8
SHKBP1-225ENST00000600733 LINGO1Q96FE5 620 aa20.04■□□□□ 0.8
SHKBP1-225ENST00000600733 C1QTNF3Q9BXJ4 246 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms