RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 EGFP01133 1207 aa17.49■□□□□ 0.39
SHKBP1-224ENST00000600718 P2RY2P41231 377 aa17.49■□□□□ 0.39
SHKBP1-224ENST00000600718 SATB1Q01826 763 aa17.49■□□□□ 0.39
SHKBP1-224ENST00000600718 ZNF284Q2VY69 593 aa17.49■□□□□ 0.39
SHKBP1-224ENST00000600718 HENMT1Q5T8I9 393 aaKnown RBP17.49■□□□□ 0.39
SHKBP1-224ENST00000600718 CYP2U1Q7Z449 544 aa17.49■□□□□ 0.39
SHKBP1-224ENST00000600718 TRMT11Q7Z4G4 463 aaKnown RBP17.49■□□□□ 0.39
SHKBP1-224ENST00000600718 SPATA21Q7Z572 469 aa17.49■□□□□ 0.39
SHKBP1-224ENST00000600718 CCDC197Q8NCU1 140 aa17.49■□□□□ 0.39
SHKBP1-224ENST00000600718 MSANTD3Q96H12 275 aa17.49■□□□□ 0.39
SHKBP1-224ENST00000600718 C7orf26Q96N11 449 aa17.49■□□□□ 0.39
SHKBP1-224ENST00000600718 GABRG3Q99928 467 aa17.49■□□□□ 0.39
SHKBP1-224ENST00000600718 ZSCAN5AQ9BUG6 496 aa17.49■□□□□ 0.39
SHKBP1-224ENST00000600718 BOCQ9BWV1 1114 aa17.49■□□□□ 0.39
SHKBP1-224ENST00000600718 THAP1Q9NVV9 213 aa17.49■□□□□ 0.39
SHKBP1-224ENST00000600718 DHRS7Q9Y394 339 aa17.49■□□□□ 0.39
SHKBP1-224ENST00000600718 IGLV3-16A0A075B6K0 115 aa17.48■□□□□ 0.39
SHKBP1-224ENST00000600718 NEMP1O14524 444 aa17.48■□□□□ 0.39
SHKBP1-224ENST00000600718 SNNO75324 88 aaPredicted RBP17.48■□□□□ 0.39
SHKBP1-224ENST00000600718 CD1DP15813 335 aa17.48■□□□□ 0.39
SHKBP1-224ENST00000600718 C5AR1P21730 350 aa17.48■□□□□ 0.39
SHKBP1-224ENST00000600718 CCDC15Q0P6D6 951 aa17.48■□□□□ 0.39
SHKBP1-224ENST00000600718 CST6Q15828 149 aa17.48■□□□□ 0.39
SHKBP1-224ENST00000600718 C2orf27AQ580R0 203 aa17.48■□□□□ 0.39
SHKBP1-224ENST00000600718 CGB2Q6NT52 195 aa17.48■□□□□ 0.39
SHKBP1-224ENST00000600718 OR6Y1Q8NGX8 325 aa17.48■□□□□ 0.39
SHKBP1-224ENST00000600718 SCAMP4Q969E2 229 aa17.48■□□□□ 0.39
SHKBP1-224ENST00000600718 FAM136AQ96C01 138 aa17.48■□□□□ 0.39
SHKBP1-224ENST00000600718 WRAP53Q9BUR4 548 aaKnown RBP17.48■□□□□ 0.39
SHKBP1-224ENST00000600718 RIOK2Q9BVS4 552 aaKnown RBP17.48■□□□□ 0.39
SHKBP1-224ENST00000600718 DERL2Q9GZP9 239 aa17.48■□□□□ 0.39
SHKBP1-224ENST00000600718 ABCG8Q9H221 673 aa17.48■□□□□ 0.39
SHKBP1-224ENST00000600718 FBRSQ9HAH7 460 aa17.48■□□□□ 0.39
SHKBP1-224ENST00000600718 GALPQ9UBC7 116 aa17.48■□□□□ 0.39
SHKBP1-224ENST00000600718 PLK4O00444 970 aa17.48■□□□□ 0.39
SHKBP1-224ENST00000600718 TFEBP19484 476 aa17.48■□□□□ 0.39
SHKBP1-224ENST00000600718 CLCN7P51798 805 aa17.48■□□□□ 0.39
SHKBP1-224ENST00000600718 ATP6V0D1P61421 351 aa17.48■□□□□ 0.39
SHKBP1-224ENST00000600718 MRPS21P82921 87 aaKnown RBP17.48■□□□□ 0.39
SHKBP1-224ENST00000600718 ASPHQ12797 758 aa17.48■□□□□ 0.39
SHKBP1-224ENST00000600718 CNTN1Q12860 1018 aa17.48■□□□□ 0.39
SHKBP1-224ENST00000600718 STARD3Q14849 445 aa17.48■□□□□ 0.39
SHKBP1-224ENST00000600718 LEXMQ3ZCV2 418 aa17.48■□□□□ 0.39
SHKBP1-224ENST00000600718 CES4AQ5XG92 561 aa17.48■□□□□ 0.39
SHKBP1-224ENST00000600718 GPR153Q6NV75 609 aa17.48■□□□□ 0.39
SHKBP1-224ENST00000600718 ISCA2Q86U28 154 aa17.48■□□□□ 0.39
SHKBP1-224ENST00000600718 ANKS4BQ8N8V4 417 aa17.48■□□□□ 0.39
SHKBP1-224ENST00000600718 SIDT2Q8NBJ9 832 aaKnown RBP17.48■□□□□ 0.39
SHKBP1-224ENST00000600718 OR2T3Q8NH03 318 aa17.48■□□□□ 0.39
SHKBP1-224ENST00000600718 CD200R1Q8TD46 325 aa17.48■□□□□ 0.39
SHKBP1-224ENST00000600718 DTD2Q96FN9 168 aa17.48■□□□□ 0.39
SHKBP1-224ENST00000600718 UNKQ9C0B0 810 aaKnown RBP17.48■□□□□ 0.39
SHKBP1-224ENST00000600718 TFB2MQ9H5Q4 396 aaKnown RBP17.48■□□□□ 0.39
SHKBP1-224ENST00000600718 TMPRSS11EQ9UL52 423 aa17.48■□□□□ 0.39
SHKBP1-224ENST00000600718 FADS3Q9Y5Q0 445 aa17.48■□□□□ 0.39
SHKBP1-224ENST00000600718 TCF20Q9UGU0 1960 aaKnown RBP17.47■□□□□ 0.39
SHKBP1-224ENST00000600718 BPTFQ12830 3046 aa17.47■□□□□ 0.39
SHKBP1-224ENST00000600718 F8W8V4 182 aa17.47■□□□□ 0.39
SHKBP1-224ENST00000600718 TGDSO95455 350 aa17.47■□□□□ 0.39
SHKBP1-224ENST00000600718 ASGR2P07307 311 aa17.47■□□□□ 0.39
SHKBP1-224ENST00000600718 FOSL2P15408 326 aa17.47■□□□□ 0.39
SHKBP1-224ENST00000600718 GM2AP17900 193 aa17.47■□□□□ 0.39
SHKBP1-224ENST00000600718 IL2P60568 153 aa17.47■□□□□ 0.39
SHKBP1-224ENST00000600718 OCRLQ01968 901 aa17.47■□□□□ 0.39
SHKBP1-224ENST00000600718 CREB5Q02930 508 aa17.47■□□□□ 0.39
SHKBP1-224ENST00000600718 GPRC6AQ5T6X5 926 aa17.47■□□□□ 0.39
SHKBP1-224ENST00000600718 LIPMQ5VYY2 423 aa17.47■□□□□ 0.39
SHKBP1-224ENST00000600718 ZNF776Q68DI1 518 aaPredicted RBP17.47■□□□□ 0.39
SHKBP1-224ENST00000600718 ZCCHC23Q6ZST2 131 aa17.47■□□□□ 0.39
SHKBP1-224ENST00000600718 ZNF765Q7L2R6 523 aa17.47■□□□□ 0.39
SHKBP1-224ENST00000600718 IL17RCQ8NAC3 791 aa17.47■□□□□ 0.39
SHKBP1-224ENST00000600718 INPP5DQ92835 1189 aa17.47■□□□□ 0.39
SHKBP1-224ENST00000600718 AP2M1Q96CW1 435 aa17.47■□□□□ 0.39
SHKBP1-224ENST00000600718 ERLEC1Q96DZ1 483 aa17.47■□□□□ 0.39
SHKBP1-224ENST00000600718 CCDC126Q96EE4 140 aa17.47■□□□□ 0.39
SHKBP1-224ENST00000600718 MTF2Q9Y483 593 aaPredicted RBP17.47■□□□□ 0.39
SHKBP1-224ENST00000600718 PRSS21Q9Y6M0 314 aa17.47■□□□□ 0.39
SHKBP1-224ENST00000600718 COL4A2P08572 1712 aa17.47■□□□□ 0.39
SHKBP1-224ENST00000600718 CCDC189A1A4V9 331 aa17.46■□□□□ 0.39
SHKBP1-224ENST00000600718 IQCF5A8MTL0 148 aa17.46■□□□□ 0.39
SHKBP1-224ENST00000600718 MID1O15344 667 aa17.46■□□□□ 0.39
SHKBP1-224ENST00000600718 AP1G1O43747 822 aa17.46■□□□□ 0.39
SHKBP1-224ENST00000600718 ZBTB14O43829 449 aa17.46■□□□□ 0.39
SHKBP1-224ENST00000600718 DLX3O60479 287 aa17.46■□□□□ 0.39
SHKBP1-224ENST00000600718 TROVE2P10155 538 aaKnown RBP eCLIP17.46■□□□□ 0.39
SHKBP1-224ENST00000600718 ATP5F1P24539 256 aaPredicted RBP17.46■□□□□ 0.39
SHKBP1-224ENST00000600718 SLC1A6P48664 564 aa17.46■□□□□ 0.39
SHKBP1-224ENST00000600718 PIP5KL1Q5T9C9 394 aa17.46■□□□□ 0.39
SHKBP1-224ENST00000600718 Q7L0L9 218 aa17.46■□□□□ 0.39
SHKBP1-224ENST00000600718 SPATS2Q86XZ4 545 aaKnown RBP17.46■□□□□ 0.39
SHKBP1-224ENST00000600718 SPNS2Q8IVW8 549 aa17.46■□□□□ 0.39
SHKBP1-224ENST00000600718 CLDN19Q8N6F1 224 aa17.46■□□□□ 0.39
SHKBP1-224ENST00000600718 RHEBL1Q8TAI7 183 aa17.46■□□□□ 0.39
SHKBP1-224ENST00000600718 CCDC97Q96F63 343 aaPredicted RBP17.46■□□□□ 0.39
SHKBP1-224ENST00000600718 VPS35Q96QK1 796 aa17.46■□□□□ 0.39
SHKBP1-224ENST00000600718 SLC30A3Q99726 388 aa17.46■□□□□ 0.39
SHKBP1-224ENST00000600718 ALG9Q9H6U8 611 aa17.46■□□□□ 0.39
SHKBP1-224ENST00000600718 LATS2Q9NRM7 1088 aa17.46■□□□□ 0.39
SHKBP1-224ENST00000600718 TMEM114B3SHH9 223 aa17.46■□□□□ 0.39
SHKBP1-224ENST00000600718 LZTS3O60299 673 aaPredicted RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms