RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 PTPRCAPQ14761 206 aa8.68□□□□□ -1.02
SSBP4-208ENST00000600628 CHRNA6Q15825 494 aa8.68□□□□□ -1.02
SSBP4-208ENST00000600628 ISXQ2M1V0 245 aa8.68□□□□□ -1.02
SSBP4-208ENST00000600628 ZNF569Q5MCW4 686 aa8.68□□□□□ -1.02
SSBP4-208ENST00000600628 IYDQ6PHW0 289 aa8.68□□□□□ -1.02
SSBP4-208ENST00000600628 ARHGEF18Q6ZSZ5 1173 aa8.68□□□□□ -1.02
SSBP4-208ENST00000600628 PHYKPLQ8IUZ5 450 aa8.68□□□□□ -1.02
SSBP4-208ENST00000600628 ARL14Q8N4G2 192 aa8.68□□□□□ -1.02
SSBP4-208ENST00000600628 OR4K2Q8NGD2 314 aa8.68□□□□□ -1.02
SSBP4-208ENST00000600628 MAPK15Q8TD08 544 aa8.68□□□□□ -1.02
SSBP4-208ENST00000600628 BLOC1S5Q8TDH9 187 aa8.68□□□□□ -1.02
SSBP4-208ENST00000600628 MAIP1Q8WWC4 291 aa8.68□□□□□ -1.02
SSBP4-208ENST00000600628 C1orf54Q8WWF1 131 aa8.68□□□□□ -1.02
SSBP4-208ENST00000600628 CCDC74AQ96AQ1 378 aa8.68□□□□□ -1.02
SSBP4-208ENST00000600628 SGSM3Q96HU1 749 aa8.68□□□□□ -1.02
SSBP4-208ENST00000600628 PBKQ96KB5 322 aa8.68□□□□□ -1.02
SSBP4-208ENST00000600628 CCDC3Q9BQI4 270 aa8.68□□□□□ -1.02
SSBP4-208ENST00000600628 TIMM29Q9BSF4 260 aa8.68□□□□□ -1.02
SSBP4-208ENST00000600628 ABCG4Q9H172 646 aa8.68□□□□□ -1.02
SSBP4-208ENST00000600628 OR2AG1Q9H205 316 aa8.68□□□□□ -1.02
SSBP4-208ENST00000600628 ETNK1Q9HBU6 452 aa8.68□□□□□ -1.02
SSBP4-208ENST00000600628 BPIFA1Q9NP55 256 aa8.68□□□□□ -1.02
SSBP4-208ENST00000600628 CASS4Q9NQ75 786 aa8.68□□□□□ -1.02
SSBP4-208ENST00000600628 NLE1Q9NVX2 485 aaPredicted RBP8.68□□□□□ -1.02
SSBP4-208ENST00000600628 PDP2Q9P2J9 529 aa8.68□□□□□ -1.02
SSBP4-208ENST00000600628 TBC1D29Q9UFV1 150 aa8.68□□□□□ -1.02
SSBP4-208ENST00000600628 SLC23A2Q9UGH3 650 aa8.68□□□□□ -1.02
SSBP4-208ENST00000600628 SSUH2Q9Y2M2 353 aa8.68□□□□□ -1.02
SSBP4-208ENST00000600628 ENTPD2Q9Y5L3 495 aa8.68□□□□□ -1.02
SSBP4-208ENST00000600628 RNF215Q9Y6U7 377 aa8.68□□□□□ -1.02
SSBP4-208ENST00000600628 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.67□□□□□ -1.02
SSBP4-208ENST00000600628 GLYATL1P3A0A0U1RQE8 302 aa8.67□□□□□ -1.02
SSBP4-208ENST00000600628 USP27XA6NNY8 438 aa8.67□□□□□ -1.02
SSBP4-208ENST00000600628 D6RAR5 112 aa8.67□□□□□ -1.02
SSBP4-208ENST00000600628 PPM1DO15297 605 aa8.67□□□□□ -1.02
SSBP4-208ENST00000600628 NRDCO43847 1150 aa8.67□□□□□ -1.02
SSBP4-208ENST00000600628 UGT1A9O60656 530 aa8.67□□□□□ -1.02
SSBP4-208ENST00000600628 KCNJ13O60928 360 aa8.67□□□□□ -1.02
SSBP4-208ENST00000600628 SRP72O76094 671 aaKnown RBP8.67□□□□□ -1.02
SSBP4-208ENST00000600628 ECEL1O95672 775 aa8.67□□□□□ -1.02
SSBP4-208ENST00000600628 F3P13726 295 aa8.67□□□□□ -1.02
SSBP4-208ENST00000600628 ETS1P14921 441 aa8.67□□□□□ -1.02
SSBP4-208ENST00000600628 XRCC1P18887 633 aaPredicted RBP8.67□□□□□ -1.02
SSBP4-208ENST00000600628 UGT1A6P19224 532 aa8.67□□□□□ -1.02
SSBP4-208ENST00000600628 UGT1A1P22309 533 aa8.67□□□□□ -1.02
SSBP4-208ENST00000600628 UGT1A4P22310 534 aa8.67□□□□□ -1.02
SSBP4-208ENST00000600628 CCKBRP32239 447 aa8.67□□□□□ -1.02
SSBP4-208ENST00000600628 CXCR5P32302 372 aa8.67□□□□□ -1.02
SSBP4-208ENST00000600628 RPL22P35268 128 aaKnown RBP8.67□□□□□ -1.02
SSBP4-208ENST00000600628 UGT1A3P35503 534 aa8.67□□□□□ -1.02
SSBP4-208ENST00000600628 UGT1A5P35504 534 aa8.67□□□□□ -1.02
SSBP4-208ENST00000600628 FDFT1P37268 417 aa8.67□□□□□ -1.02
SSBP4-208ENST00000600628 GRIA1P42261 906 aa8.67□□□□□ -1.02
SSBP4-208ENST00000600628 UBE2IP63279 158 aaKnown RBP8.67□□□□□ -1.02
SSBP4-208ENST00000600628 CFHR1Q03591 330 aa8.67□□□□□ -1.02
SSBP4-208ENST00000600628 TMEM115Q12893 351 aaPredicted RBP8.67□□□□□ -1.02
SSBP4-208ENST00000600628 NFATC2Q13469 925 aa8.67□□□□□ -1.02
SSBP4-208ENST00000600628 ITGA9Q13797 1035 aa8.67□□□□□ -1.02
SSBP4-208ENST00000600628 SPARCL1Q14515 664 aa8.67□□□□□ -1.02
SSBP4-208ENST00000600628 PRPSAP1Q14558 356 aa8.67□□□□□ -1.02
SSBP4-208ENST00000600628 TCEA2Q15560 299 aa8.67□□□□□ -1.02
SSBP4-208ENST00000600628 CLPPQ16740 277 aaPredicted RBP8.67□□□□□ -1.02
SSBP4-208ENST00000600628 ZNF648Q5T619 568 aaPredicted RBP8.67□□□□□ -1.02
SSBP4-208ENST00000600628 GPRC6AQ5T6X5 926 aa8.67□□□□□ -1.02
SSBP4-208ENST00000600628 AGAP9Q5VTM2 703 aa8.67□□□□□ -1.02
SSBP4-208ENST00000600628 ALS2CLQ60I27 953 aa8.67□□□□□ -1.02
SSBP4-208ENST00000600628 TTC27Q6P3X3 843 aa8.67□□□□□ -1.02
SSBP4-208ENST00000600628 ABRAXAS1Q6UWZ7 409 aa8.67□□□□□ -1.02
SSBP4-208ENST00000600628 TMPRSS9Q7Z410 1059 aa8.67□□□□□ -1.02
SSBP4-208ENST00000600628 GALNT13Q8IUC8 556 aa8.67□□□□□ -1.02
SSBP4-208ENST00000600628 SLITRK4Q8IW52 837 aa8.67□□□□□ -1.02
SSBP4-208ENST00000600628 OR13C4Q8NGS5 318 aa8.67□□□□□ -1.02
SSBP4-208ENST00000600628 ACTRT1Q8TDG2 376 aa8.67□□□□□ -1.02
SSBP4-208ENST00000600628 ZDHHC1Q8WTX9 485 aa8.67□□□□□ -1.02
SSBP4-208ENST00000600628 PATE1Q8WXA2 126 aa8.67□□□□□ -1.02
SSBP4-208ENST00000600628 PEX13Q92968 403 aa8.67□□□□□ -1.02
SSBP4-208ENST00000600628 NXPE2Q96DL1 559 aa8.67□□□□□ -1.02
SSBP4-208ENST00000600628 LIN37Q96GY3 246 aaPredicted RBP8.67□□□□□ -1.02
SSBP4-208ENST00000600628 LINC00615Q96LM1 132 aaPredicted RBP8.67□□□□□ -1.02
SSBP4-208ENST00000600628 RANBP9Q96S59 729 aa8.67□□□□□ -1.02
SSBP4-208ENST00000600628 APOL2Q9BQE5 337 aa8.67□□□□□ -1.02
SSBP4-208ENST00000600628 UCK1Q9HA47 277 aa8.67□□□□□ -1.02
SSBP4-208ENST00000600628 UGT1A7Q9HAW7 530 aa8.67□□□□□ -1.02
SSBP4-208ENST00000600628 UGT1A10Q9HAW8 530 aa8.67□□□□□ -1.02
SSBP4-208ENST00000600628 UGT1A8Q9HAW9 530 aa8.67□□□□□ -1.02
SSBP4-208ENST00000600628 ARFGAP3Q9NP61 516 aa8.67□□□□□ -1.02
SSBP4-208ENST00000600628 SARS2Q9NP81 518 aaKnown RBP8.67□□□□□ -1.02
SSBP4-208ENST00000600628 EIF2B3Q9NR50 452 aaKnown RBP8.67□□□□□ -1.02
SSBP4-208ENST00000600628 HOMER3Q9NSC5 361 aa8.67□□□□□ -1.02
SSBP4-208ENST00000600628 PAK5Q9P286 719 aa8.67□□□□□ -1.02
SSBP4-208ENST00000600628 MOSPD1Q9UJG1 213 aa8.67□□□□□ -1.02
SSBP4-208ENST00000600628 PKP3Q9Y446 797 aa8.67□□□□□ -1.02
SSBP4-208ENST00000600628 PRKAB1Q9Y478 270 aa8.67□□□□□ -1.02
SSBP4-208ENST00000600628 PCDHB1Q9Y5F3 818 aa8.67□□□□□ -1.02
SSBP4-208ENST00000600628 DNMT3AQ9Y6K1 912 aaPredicted RBP8.67□□□□□ -1.02
SSBP4-208ENST00000600628 AK5Q9Y6K8 562 aa8.67□□□□□ -1.02
SSBP4-208ENST00000600628 BOD1L1Q8NFC6 3051 aa8.67□□□□□ -1.02
SSBP4-208ENST00000600628 GOLGA6CA6NDK9 693 aa8.66□□□□□ -1.02
SSBP4-208ENST00000600628 GOLGA6BA6NDN3 693 aa8.66□□□□□ -1.02
SSBP4-208ENST00000600628 C2orf81A6NN90 581 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms