RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 FASTKD3Q14CZ7 662 aaKnown RBP18.69■□□□□ 0.58
CCDC9-205ENST00000600117 TEAD4Q15561 434 aa18.69■□□□□ 0.58
CCDC9-205ENST00000600117 TRIP6Q15654 476 aaKnown RBP18.69■□□□□ 0.58
CCDC9-205ENST00000600117 ANKRD20A4Q4UJ75 823 aa18.69■□□□□ 0.58
CCDC9-205ENST00000600117 ATP13A5Q4VNC0 1218 aa18.69■□□□□ 0.58
CCDC9-205ENST00000600117 CCNI2Q6ZMN8 369 aaPredicted RBP18.69■□□□□ 0.58
CCDC9-205ENST00000600117 SPATS2Q86XZ4 545 aaKnown RBP18.69■□□□□ 0.58
CCDC9-205ENST00000600117 HDAC10Q969S8 669 aa18.69■□□□□ 0.58
CCDC9-205ENST00000600117 LRRC39Q96DD0 335 aa18.69■□□□□ 0.58
CCDC9-205ENST00000600117 COX14Q96I36 57 aa18.69■□□□□ 0.58
CCDC9-205ENST00000600117 FCRL3Q96P31 734 aaPredicted RBP18.69■□□□□ 0.58
CCDC9-205ENST00000600117 FOXP3Q9BZS1 431 aa18.69■□□□□ 0.58
CCDC9-205ENST00000600117 PHACTR1Q9C0D0 580 aa18.69■□□□□ 0.58
CCDC9-205ENST00000600117 WDR26Q9H7D7 661 aa18.69■□□□□ 0.58
CCDC9-205ENST00000600117 UGT1A7Q9HAW7 530 aa18.69■□□□□ 0.58
CCDC9-205ENST00000600117 UGT1A10Q9HAW8 530 aa18.69■□□□□ 0.58
CCDC9-205ENST00000600117 UGT1A8Q9HAW9 530 aa18.69■□□□□ 0.58
CCDC9-205ENST00000600117 SAMD15Q9P1V8 674 aa18.69■□□□□ 0.58
CCDC9-205ENST00000600117 APPL1Q9UKG1 709 aa18.69■□□□□ 0.58
CCDC9-205ENST00000600117 MAD1L1Q9Y6D9 718 aa18.69■□□□□ 0.58
CCDC9-205ENST00000600117 TP53BP1Q12888 1972 aaPredicted RBP18.68■□□□□ 0.58
CCDC9-205ENST00000600117 ZCWPW2A0A1B0GU75 182 aa18.68■□□□□ 0.58
CCDC9-205ENST00000600117 OR51F1A6NGY5 319 aa18.68■□□□□ 0.58
CCDC9-205ENST00000600117 EIF4E1BA6NMX2 242 aaKnown RBP18.68■□□□□ 0.58
CCDC9-205ENST00000600117 AGAP14A8MT82 685 aa18.68■□□□□ 0.58
CCDC9-205ENST00000600117 TLR4O00206 839 aa18.68■□□□□ 0.58
CCDC9-205ENST00000600117 EIF3HO15372 352 aaKnown RBP eCLIP18.68■□□□□ 0.58
CCDC9-205ENST00000600117 PRAMEF1O95521 474 aa18.68■□□□□ 0.58
CCDC9-205ENST00000600117 MYCLP1P12525 358 aaPredicted RBP18.68■□□□□ 0.58
CCDC9-205ENST00000600117 MC4RP32245 332 aa18.68■□□□□ 0.58
CCDC9-205ENST00000600117 FOXN2P32314 431 aa18.68■□□□□ 0.58
CCDC9-205ENST00000600117 CTSKP43235 329 aa18.68■□□□□ 0.58
CCDC9-205ENST00000600117 NXPH1P58417 271 aa18.68■□□□□ 0.58
CCDC9-205ENST00000600117 NFATC4Q14934 902 aa18.68■□□□□ 0.58
CCDC9-205ENST00000600117 HP1BP3Q5SSJ5 553 aaPredicted RBP18.68■□□□□ 0.58
CCDC9-205ENST00000600117 KIAA0930Q6ICG6 404 aaPredicted RBP18.68■□□□□ 0.58
CCDC9-205ENST00000600117 CENPUQ71F23 418 aa18.68■□□□□ 0.58
CCDC9-205ENST00000600117 IFT20Q8IY31 132 aa18.68■□□□□ 0.58
CCDC9-205ENST00000600117 ZNF398Q8TD17 642 aa18.68■□□□□ 0.58
CCDC9-205ENST00000600117 BTN2A2Q8WVV5 523 aa18.68■□□□□ 0.58
CCDC9-205ENST00000600117 GLYATL1Q969I3 302 aa18.68■□□□□ 0.58
CCDC9-205ENST00000600117 ZNF669Q96BR6 464 aaPredicted RBP18.68■□□□□ 0.58
CCDC9-205ENST00000600117 VPS35Q96QK1 796 aa18.68■□□□□ 0.58
CCDC9-205ENST00000600117 SMOXQ9NWM0 555 aa18.68■□□□□ 0.58
CCDC9-205ENST00000600117 CHMP2BQ9UQN3 213 aa18.68■□□□□ 0.58
CCDC9-205ENST00000600117 TRBV5-4A0A0C4DH59 114 aa18.67■□□□□ 0.58
CCDC9-205ENST00000600117 INPP4BO15327 924 aa18.67■□□□□ 0.58
CCDC9-205ENST00000600117 USP1O94782 785 aa18.67■□□□□ 0.58
CCDC9-205ENST00000600117 GOT2P00505 430 aaKnown RBP18.67■□□□□ 0.58
CCDC9-205ENST00000600117 SYPP08247 313 aa18.67■□□□□ 0.58
CCDC9-205ENST00000600117 FTH1P19P0C7X4 201 aa18.67■□□□□ 0.58
CCDC9-205ENST00000600117 PRSS56P0CW18 603 aa18.67■□□□□ 0.58
CCDC9-205ENST00000600117 PGAM1P18669 254 aa18.67■□□□□ 0.58
CCDC9-205ENST00000600117 ARCN1P48444 511 aaKnown RBP18.67■□□□□ 0.58
CCDC9-205ENST00000600117 NFATC2Q13469 925 aa18.67■□□□□ 0.58
CCDC9-205ENST00000600117 CUL1Q13616 776 aa18.67■□□□□ 0.58
CCDC9-205ENST00000600117 ITGA9Q13797 1035 aa18.67■□□□□ 0.58
CCDC9-205ENST00000600117 PDE1CQ14123 709 aaPredicted RBP18.67■□□□□ 0.58
CCDC9-205ENST00000600117 KIF19Q2TAC6 998 aa18.67■□□□□ 0.58
CCDC9-205ENST00000600117 MACC1Q6ZN28 852 aa18.67■□□□□ 0.58
CCDC9-205ENST00000600117 SNX20Q7Z614 316 aa18.67■□□□□ 0.58
CCDC9-205ENST00000600117 TRIM74Q86UV6 250 aa18.67■□□□□ 0.58
CCDC9-205ENST00000600117 DCP2Q8IU60 420 aaKnown RBP18.67■□□□□ 0.58
CCDC9-205ENST00000600117 OR2I1PQ8NGU4 316 aa18.67■□□□□ 0.58
CCDC9-205ENST00000600117 HNRNPLLQ8WVV9 542 aaKnown RBP18.67■□□□□ 0.58
CCDC9-205ENST00000600117 IFT81Q8WYA0 676 aa18.67■□□□□ 0.58
CCDC9-205ENST00000600117 SGSM3Q96HU1 749 aa18.67■□□□□ 0.58
CCDC9-205ENST00000600117 HIC2Q96JB3 615 aa18.67■□□□□ 0.58
CCDC9-205ENST00000600117 CAMK1GQ96NX5 476 aa18.67■□□□□ 0.58
CCDC9-205ENST00000600117 NAT9Q9BTE0 207 aa18.67■□□□□ 0.58
CCDC9-205ENST00000600117 ASB8Q9H765 288 aa18.67■□□□□ 0.58
CCDC9-205ENST00000600117 ANKZF1Q9H8Y5 726 aa18.67■□□□□ 0.58
CCDC9-205ENST00000600117 PHPT1Q9NRX4 125 aaPredicted RBP18.67■□□□□ 0.58
CCDC9-205ENST00000600117 ANKRD6Q9Y2G4 727 aa18.67■□□□□ 0.58
CCDC9-205ENST00000600117 OAS3Q9Y6K5 1087 aaKnown RBP18.67■□□□□ 0.58
CCDC9-205ENST00000600117 RPS6KL1Q9Y6S9 549 aa18.67■□□□□ 0.58
CCDC9-205ENST00000600117 KNL1Q8NG31 2342 aa18.67■□□□□ 0.58
CCDC9-205ENST00000600117 SPTY2D1-AS1A0A0U1RR47 76 aa18.66■□□□□ 0.58
CCDC9-205ENST00000600117 TMEM202A6NGA9 273 aa18.66■□□□□ 0.58
CCDC9-205ENST00000600117 CACNB4O00305 520 aaPredicted RBP18.66■□□□□ 0.58
CCDC9-205ENST00000600117 SH3BP5O60239 455 aa18.66■□□□□ 0.58
CCDC9-205ENST00000600117 MAGEC1O60732 1142 aa18.66■□□□□ 0.58
CCDC9-205ENST00000600117 ZIC2O95409 532 aaPredicted RBP18.66■□□□□ 0.58
CCDC9-205ENST00000600117 ITGALP20701 1170 aa18.66■□□□□ 0.58
CCDC9-205ENST00000600117 CDKN1CP49918 316 aaPredicted RBP18.66■□□□□ 0.58
CCDC9-205ENST00000600117 THOP1P52888 689 aa18.66■□□□□ 0.58
CCDC9-205ENST00000600117 C21orf59P57076 290 aa18.66■□□□□ 0.58
CCDC9-205ENST00000600117 TUBB4BP68371 445 aa18.66■□□□□ 0.58
CCDC9-205ENST00000600117 PRAMEP78395 509 aa18.66■□□□□ 0.58
CCDC9-205ENST00000600117 FZD2Q14332 565 aa18.66■□□□□ 0.58
CCDC9-205ENST00000600117 HLTFQ14527 1009 aaKnown RBP eCLIP18.66■□□□□ 0.58
CCDC9-205ENST00000600117 STEAP4Q687X5 459 aa18.66■□□□□ 0.58
CCDC9-205ENST00000600117 KCTD16Q68DU8 428 aa18.66■□□□□ 0.58
CCDC9-205ENST00000600117 AFTPHQ6ULP2 937 aa18.66■□□□□ 0.58
CCDC9-205ENST00000600117 ANKMY2Q8IV38 441 aa18.66■□□□□ 0.58
CCDC9-205ENST00000600117 PIANPQ8IYJ0 282 aa18.66■□□□□ 0.58
CCDC9-205ENST00000600117 FBXO36Q8NEA4 188 aa18.66■□□□□ 0.58
CCDC9-205ENST00000600117 SKA1Q96BD8 255 aa18.66■□□□□ 0.58
CCDC9-205ENST00000600117 FAM96AQ9H5X1 160 aa18.66■□□□□ 0.58
CCDC9-205ENST00000600117 SAYSD1Q9NPB0 183 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms