RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 PID1Q7Z2X4 250 aa13.61□□□□□ -0.23
SCAF1-203ENST00000598359 PIM3Q86V86 326 aa13.61□□□□□ -0.23
SCAF1-203ENST00000598359 RAVER1Q8IY67 606 aaKnown RBP13.61□□□□□ -0.23
SCAF1-203ENST00000598359 IPMKQ8NFU5 416 aa13.61□□□□□ -0.23
SCAF1-203ENST00000598359 HTR3CQ8WXA8 447 aa13.61□□□□□ -0.23
SCAF1-203ENST00000598359 MRGPRX2Q96LB1 330 aa13.61□□□□□ -0.23
SCAF1-203ENST00000598359 LUC7LQ9NQ29 371 aaKnown RBP13.61□□□□□ -0.23
SCAF1-203ENST00000598359 TRIM10Q9UDY6 481 aa13.61□□□□□ -0.23
SCAF1-203ENST00000598359 FAM153AQ9UHL3 310 aa13.61□□□□□ -0.23
SCAF1-203ENST00000598359 TMPRSS11EQ9UL52 423 aa13.61□□□□□ -0.23
SCAF1-203ENST00000598359 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.61□□□□□ -0.23
SCAF1-203ENST00000598359 UNC13CQ8NB66 2214 aa13.6□□□□□ -0.23
SCAF1-203ENST00000598359 MGAQ8IWI9 3026 aa13.6□□□□□ -0.23
SCAF1-203ENST00000598359 IGHV1OR21-1A0A087WYE8 117 aa13.6□□□□□ -0.23
SCAF1-203ENST00000598359 IGHV5-10-1A0A0J9YXX1 117 aa13.6□□□□□ -0.23
SCAF1-203ENST00000598359 MACROD2A1Z1Q3 448 aa13.6□□□□□ -0.23
SCAF1-203ENST00000598359 TMX2-CTNND1H3BSU7 103 aa13.6□□□□□ -0.23
SCAF1-203ENST00000598359 ATXN7O15265 892 aaPredicted RBP13.6□□□□□ -0.23
SCAF1-203ENST00000598359 GPR39O43194 453 aa13.6□□□□□ -0.23
SCAF1-203ENST00000598359 GRID2O43424 1007 aa13.6□□□□□ -0.23
SCAF1-203ENST00000598359 NUAK1O60285 661 aa13.6□□□□□ -0.23
SCAF1-203ENST00000598359 CCL4P13236 92 aa13.6□□□□□ -0.23
SCAF1-203ENST00000598359 CTNNA1P35221 906 aaKnown RBP13.6□□□□□ -0.23
SCAF1-203ENST00000598359 PPM1FP49593 454 aaPredicted RBP13.6□□□□□ -0.23
SCAF1-203ENST00000598359 SRSF6Q13247 344 aaKnown RBP13.6□□□□□ -0.23
SCAF1-203ENST00000598359 CLN3Q13286 438 aa13.6□□□□□ -0.23
SCAF1-203ENST00000598359 NFATC2Q13469 925 aa13.6□□□□□ -0.23
SCAF1-203ENST00000598359 LRP8Q14114 963 aa13.6□□□□□ -0.23
SCAF1-203ENST00000598359 TGIF1Q15583 401 aa13.6□□□□□ -0.23
SCAF1-203ENST00000598359 SLC14A2Q15849 920 aa13.6□□□□□ -0.23
SCAF1-203ENST00000598359 CCDC181Q5TID7 509 aa13.6□□□□□ -0.23
SCAF1-203ENST00000598359 BROXQ5VW32 411 aa13.6□□□□□ -0.23
SCAF1-203ENST00000598359 CCDC70Q6NSX1 233 aa13.6□□□□□ -0.23
SCAF1-203ENST00000598359 GPR155Q7Z3F1 870 aa13.6□□□□□ -0.23
SCAF1-203ENST00000598359 ADGRG6Q86SQ4 1221 aa13.6□□□□□ -0.23
SCAF1-203ENST00000598359 SFRP1Q8N474 314 aa13.6□□□□□ -0.23
SCAF1-203ENST00000598359 TTC30BQ8N4P2 665 aa13.6□□□□□ -0.23
SCAF1-203ENST00000598359 GLYATL1Q969I3 302 aa13.6□□□□□ -0.23
SCAF1-203ENST00000598359 CCDC74BQ96LY2 380 aa13.6□□□□□ -0.23
SCAF1-203ENST00000598359 GORASP1Q9BQQ3 440 aa13.6□□□□□ -0.23
SCAF1-203ENST00000598359 DESI2Q9BSY9 194 aa13.6□□□□□ -0.23
SCAF1-203ENST00000598359 DPH1Q9BZG8 443 aa13.6□□□□□ -0.23
SCAF1-203ENST00000598359 PRDM8Q9NQV8 689 aa13.6□□□□□ -0.23
SCAF1-203ENST00000598359 KCNK4Q9NYG8 393 aa13.6□□□□□ -0.23
SCAF1-203ENST00000598359 FOXJ2Q9P0K8 574 aa13.6□□□□□ -0.23
SCAF1-203ENST00000598359 SLC23A2Q9UGH3 650 aa13.6□□□□□ -0.23
SCAF1-203ENST00000598359 PCDHA3Q9Y5H8 950 aa13.6□□□□□ -0.23
SCAF1-203ENST00000598359 ATMQ13315 3056 aa13.6□□□□□ -0.23
SCAF1-203ENST00000598359 HECTD1Q9ULT8 2610 aa13.6□□□□□ -0.23
SCAF1-203ENST00000598359 COL6A6A6NMZ7 2263 aa13.59□□□□□ -0.23
SCAF1-203ENST00000598359 PRAMEF33A0A0G2JMD5 474 aa13.59□□□□□ -0.23
SCAF1-203ENST00000598359 LOC285095A0A1B0GVY8 99 aa13.59□□□□□ -0.23
SCAF1-203ENST00000598359 GRID2IPA4D2P6 1211 aa13.59□□□□□ -0.23
SCAF1-203ENST00000598359 APOC4-APOC2K7ER74 178 aa13.59□□□□□ -0.23
SCAF1-203ENST00000598359 PRAMEF10O60809 474 aa13.59□□□□□ -0.23
SCAF1-203ENST00000598359 APOC2P02655 101 aa13.59□□□□□ -0.23
SCAF1-203ENST00000598359 CA5AP35218 305 aa13.59□□□□□ -0.23
SCAF1-203ENST00000598359 GPR3P46089 330 aa13.59□□□□□ -0.23
SCAF1-203ENST00000598359 TMPRSS3P57727 454 aa13.59□□□□□ -0.23
SCAF1-203ENST00000598359 DCDC1P59894 354 aa13.59□□□□□ -0.23
SCAF1-203ENST00000598359 OTUD4Q01804 1114 aaKnown RBP13.59□□□□□ -0.23
SCAF1-203ENST00000598359 EIF3IQ13347 325 aaKnown RBP13.59□□□□□ -0.23
SCAF1-203ENST00000598359 OLIG2Q13516 323 aa13.59□□□□□ -0.23
SCAF1-203ENST00000598359 PTPRCAPQ14761 206 aa13.59□□□□□ -0.23
SCAF1-203ENST00000598359 PPP2R5EQ16537 467 aa13.59□□□□□ -0.23
SCAF1-203ENST00000598359 SYT10Q6XYQ8 523 aa13.59□□□□□ -0.23
SCAF1-203ENST00000598359 TRAM1L1Q8N609 369 aa13.59□□□□□ -0.23
SCAF1-203ENST00000598359 ACTL9Q8TC94 416 aa13.59□□□□□ -0.23
SCAF1-203ENST00000598359 BLOC1S5Q8TDH9 187 aa13.59□□□□□ -0.23
SCAF1-203ENST00000598359 ALG3Q92685 438 aa13.59□□□□□ -0.23
SCAF1-203ENST00000598359 USP7Q93009 1102 aa13.59□□□□□ -0.23
SCAF1-203ENST00000598359 PMEPA1Q969W9 287 aa13.59□□□□□ -0.23
SCAF1-203ENST00000598359 FCRL5Q96RD9 977 aa13.59□□□□□ -0.23
SCAF1-203ENST00000598359 ZSCAN5AQ9BUG6 496 aa13.59□□□□□ -0.23
SCAF1-203ENST00000598359 OSBPL8Q9BZF1 889 aa13.59□□□□□ -0.23
SCAF1-203ENST00000598359 ZMYND15Q9H091 742 aa13.59□□□□□ -0.23
SCAF1-203ENST00000598359 CARD9Q9H257 536 aa13.59□□□□□ -0.23
SCAF1-203ENST00000598359 OSGEPL1Q9H4B0 414 aa13.59□□□□□ -0.23
SCAF1-203ENST00000598359 KLC4Q9NSK0 619 aa13.59□□□□□ -0.23
SCAF1-203ENST00000598359 RSPH14Q9UHP6 348 aa13.59□□□□□ -0.23
SCAF1-203ENST00000598359 A6NCN8 305 aa13.58□□□□□ -0.24
SCAF1-203ENST00000598359 HACD1B0YJ81 288 aa13.58□□□□□ -0.24
SCAF1-203ENST00000598359 C9orf172C9J069 976 aa13.58□□□□□ -0.24
SCAF1-203ENST00000598359 FANCGO15287 622 aa13.58□□□□□ -0.24
SCAF1-203ENST00000598359 PJA2O43164 708 aa13.58□□□□□ -0.24
SCAF1-203ENST00000598359 MTSS1O43312 755 aa13.58□□□□□ -0.24
SCAF1-203ENST00000598359 UGT1A9O60656 530 aa13.58□□□□□ -0.24
SCAF1-203ENST00000598359 IPO7O95373 1038 aaKnown RBP13.58□□□□□ -0.24
SCAF1-203ENST00000598359 AGTP01019 485 aa13.58□□□□□ -0.24
SCAF1-203ENST00000598359 PYGMP11217 842 aa13.58□□□□□ -0.24
SCAF1-203ENST00000598359 UGT1A6P19224 532 aa13.58□□□□□ -0.24
SCAF1-203ENST00000598359 UGT1A1P22309 533 aa13.58□□□□□ -0.24
SCAF1-203ENST00000598359 UGT1A4P22310 534 aa13.58□□□□□ -0.24
SCAF1-203ENST00000598359 UGT1A3P35503 534 aa13.58□□□□□ -0.24
SCAF1-203ENST00000598359 MLLT3P42568 568 aaPredicted RBP13.58□□□□□ -0.24
SCAF1-203ENST00000598359 MAPK9P45984 424 aa13.58□□□□□ -0.24
SCAF1-203ENST00000598359 VAV2P52735 878 aa13.58□□□□□ -0.24
SCAF1-203ENST00000598359 HHEXQ03014 270 aa13.58□□□□□ -0.24
SCAF1-203ENST00000598359 PEX6Q13608 980 aa13.58□□□□□ -0.24
SCAF1-203ENST00000598359 SLC1A5Q15758 541 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms