RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 CRLS1Q9UJA2 301 aa10.97□□□□□ -0.65
LIG1-211ENST00000596457 APPL1Q9UKG1 709 aa10.97□□□□□ -0.65
LIG1-211ENST00000596457 TMPRSS11EQ9UL52 423 aa10.97□□□□□ -0.65
LIG1-211ENST00000596457 ZMIZ1Q9ULJ6 1067 aa10.97□□□□□ -0.65
LIG1-211ENST00000596457 KCNK6Q9Y257 313 aa10.97□□□□□ -0.65
LIG1-211ENST00000596457 MSRB2Q9Y3D2 182 aa10.97□□□□□ -0.65
LIG1-211ENST00000596457 PCYT1BQ9Y5K3 369 aaPredicted RBP10.97□□□□□ -0.65
LIG1-211ENST00000596457 SLC30A1Q9Y6M5 507 aa10.97□□□□□ -0.65
LIG1-211ENST00000596457 ZFC3H1O60293 1989 aaKnown RBP10.96□□□□□ -0.65
LIG1-211ENST00000596457 GOLGA8MH3BSY2 632 aa10.96□□□□□ -0.65
LIG1-211ENST00000596457 GAPDHSO14556 408 aaPredicted RBP10.96□□□□□ -0.65
LIG1-211ENST00000596457 FANCGO15287 622 aa10.96□□□□□ -0.65
LIG1-211ENST00000596457 HYAL3O43820 417 aaPredicted RBP10.96□□□□□ -0.65
LIG1-211ENST00000596457 NUAK1O60285 661 aa10.96□□□□□ -0.65
LIG1-211ENST00000596457 SNX2O60749 519 aa10.96□□□□□ -0.65
LIG1-211ENST00000596457 RFPL3O75679 317 aa10.96□□□□□ -0.65
LIG1-211ENST00000596457 SRP72O76094 671 aaKnown RBP10.96□□□□□ -0.65
LIG1-211ENST00000596457 PRSS56P0CW18 603 aa10.96□□□□□ -0.65
LIG1-211ENST00000596457 CKMT1AP12532 417 aa10.96□□□□□ -0.65
LIG1-211ENST00000596457 ACP5P13686 325 aa10.96□□□□□ -0.65
LIG1-211ENST00000596457 MSH3P20585 1137 aa10.96□□□□□ -0.65
LIG1-211ENST00000596457 MC4RP32245 332 aa10.96□□□□□ -0.65
LIG1-211ENST00000596457 RPIAP49247 311 aa10.96□□□□□ -0.65
LIG1-211ENST00000596457 FNTAP49354 379 aa10.96□□□□□ -0.65
LIG1-211ENST00000596457 ACADVLP49748 655 aa10.96□□□□□ -0.65
LIG1-211ENST00000596457 ZNF140P52738 457 aaPredicted RBP10.96□□□□□ -0.65
LIG1-211ENST00000596457 CLDN6P56747 220 aa10.96□□□□□ -0.65
LIG1-211ENST00000596457 ETF1P62495 437 aaKnown RBP10.96□□□□□ -0.65
LIG1-211ENST00000596457 CRADDP78560 199 aa10.96□□□□□ -0.65
LIG1-211ENST00000596457 TMEM115Q12893 351 aaPredicted RBP10.96□□□□□ -0.65
LIG1-211ENST00000596457 INSCQ1MX18 579 aa10.96□□□□□ -0.65
LIG1-211ENST00000596457 KHDC1Q4VXA5 237 aaKnown RBP10.96□□□□□ -0.65
LIG1-211ENST00000596457 LVRNQ6Q4G3 990 aa10.96□□□□□ -0.65
LIG1-211ENST00000596457 DET1Q7L5Y6 550 aa10.96□□□□□ -0.65
LIG1-211ENST00000596457 EFL1Q7Z2Z2 1120 aaKnown RBP10.96□□□□□ -0.65
LIG1-211ENST00000596457 RAB44Q7Z6P3 723 aaPredicted RBP10.96□□□□□ -0.65
LIG1-211ENST00000596457 NRROSQ86YC3 692 aa10.96□□□□□ -0.65
LIG1-211ENST00000596457 SLC35F3Q8IY50 421 aa10.96□□□□□ -0.65
LIG1-211ENST00000596457 KYQ8NBH2 561 aa10.96□□□□□ -0.65
LIG1-211ENST00000596457 PPHLN1Q8NEY8 458 aaKnown RBP10.96□□□□□ -0.65
LIG1-211ENST00000596457 IFI44Q8TCB0 444 aa10.96□□□□□ -0.65
LIG1-211ENST00000596457 GPBAR1Q8TDU6 330 aa10.96□□□□□ -0.65
LIG1-211ENST00000596457 ZDHHC1Q8WTX9 485 aa10.96□□□□□ -0.65
LIG1-211ENST00000596457 STYXQ8WUJ0 223 aa10.96□□□□□ -0.65
LIG1-211ENST00000596457 NAT14Q8WUY8 206 aa10.96□□□□□ -0.65
LIG1-211ENST00000596457 ZNF592Q92610 1267 aa10.96□□□□□ -0.65
LIG1-211ENST00000596457 C16orf45Q96MC5 204 aaPredicted RBP10.96□□□□□ -0.65
LIG1-211ENST00000596457 VPS35Q96QK1 796 aa10.96□□□□□ -0.65
LIG1-211ENST00000596457 BOCQ9BWV1 1114 aa10.96□□□□□ -0.65
LIG1-211ENST00000596457 OSGEPL1Q9H4B0 414 aa10.96□□□□□ -0.65
LIG1-211ENST00000596457 SYNDIG1Q9H7V2 258 aa10.96□□□□□ -0.65
LIG1-211ENST00000596457 NLE1Q9NVX2 485 aaPredicted RBP10.96□□□□□ -0.65
LIG1-211ENST00000596457 TRNAU1APQ9NX07 287 aaKnown RBP10.96□□□□□ -0.65
LIG1-211ENST00000596457 TOR4AQ9NXH8 423 aa10.96□□□□□ -0.65
LIG1-211ENST00000596457 TAAR2Q9P1P5 351 aa10.96□□□□□ -0.65
LIG1-211ENST00000596457 VPS18Q9P253 973 aa10.96□□□□□ -0.65
LIG1-211ENST00000596457 ASIC3Q9UHC3 531 aa10.96□□□□□ -0.65
LIG1-211ENST00000596457 PADI4Q9UM07 663 aa10.96□□□□□ -0.65
LIG1-211ENST00000596457 DNAJC16Q9Y2G8 782 aa10.96□□□□□ -0.65
LIG1-211ENST00000596457 LAMA1P25391 3075 aa10.95□□□□□ -0.66
LIG1-211ENST00000596457 BPTFQ12830 3046 aa10.95□□□□□ -0.66
LIG1-211ENST00000596457 LY6G6EA0A0G2JKS1 128 aa10.95□□□□□ -0.66
LIG1-211ENST00000596457 HEATR9A2RTY3 570 aa10.95□□□□□ -0.66
LIG1-211ENST00000596457 OR51F1A6NGY5 319 aa10.95□□□□□ -0.66
LIG1-211ENST00000596457 OR2AG2A6NM03 316 aa10.95□□□□□ -0.66
LIG1-211ENST00000596457 VEGFDO43915 354 aa10.95□□□□□ -0.66
LIG1-211ENST00000596457 CDK4P11802 303 aa10.95□□□□□ -0.66
LIG1-211ENST00000596457 TPSB2P20231 275 aa10.95□□□□□ -0.66
LIG1-211ENST00000596457 ITGALP20701 1170 aa10.95□□□□□ -0.66
LIG1-211ENST00000596457 ACP1P24666 158 aa10.95□□□□□ -0.66
LIG1-211ENST00000596457 ADRA1DP25100 572 aa10.95□□□□□ -0.66
LIG1-211ENST00000596457 MGAT1P26572 445 aa10.95□□□□□ -0.66
LIG1-211ENST00000596457 PBLDP30039 288 aaPredicted RBP10.95□□□□□ -0.66
LIG1-211ENST00000596457 CDKN1CP49918 316 aaPredicted RBP10.95□□□□□ -0.66
LIG1-211ENST00000596457 SARNPP82979 210 aaKnown RBP10.95□□□□□ -0.66
LIG1-211ENST00000596457 XIAPP98170 497 aa10.95□□□□□ -0.66
LIG1-211ENST00000596457 BIRC2Q13490 618 aa10.95□□□□□ -0.66
LIG1-211ENST00000596457 PEX6Q13608 980 aa10.95□□□□□ -0.66
LIG1-211ENST00000596457 KCNJ11Q14654 390 aa10.95□□□□□ -0.66
LIG1-211ENST00000596457 TPSAB1Q15661 275 aa10.95□□□□□ -0.66
LIG1-211ENST00000596457 SKIDA1Q1XH10 827 aa10.95□□□□□ -0.66
LIG1-211ENST00000596457 PERM1Q5SV97 790 aa10.95□□□□□ -0.66
LIG1-211ENST00000596457 LDLRAP1Q5SW96 308 aa10.95□□□□□ -0.66
LIG1-211ENST00000596457 GPRC6AQ5T6X5 926 aa10.95□□□□□ -0.66
LIG1-211ENST00000596457 TSTD2Q5T7W7 516 aa10.95□□□□□ -0.66
LIG1-211ENST00000596457 ANKRD22Q5VYY1 191 aa10.95□□□□□ -0.66
LIG1-211ENST00000596457 GUSBP11Q6P575 273 aa10.95□□□□□ -0.66
LIG1-211ENST00000596457 TMEM220Q6QAJ8 160 aa10.95□□□□□ -0.66
LIG1-211ENST00000596457 UNQ6494/PRO21346Q6UXR6 183 aa10.95□□□□□ -0.66
LIG1-211ENST00000596457 LRRTM4Q86VH4 590 aa10.95□□□□□ -0.66
LIG1-211ENST00000596457 MARCH9Q86YJ5 346 aa10.95□□□□□ -0.66
LIG1-211ENST00000596457 TRAPPC5Q8IUR0 188 aa10.95□□□□□ -0.66
LIG1-211ENST00000596457 SDR16C5Q8N3Y7 309 aa10.95□□□□□ -0.66
LIG1-211ENST00000596457 ARL10Q8N8L6 244 aa10.95□□□□□ -0.66
LIG1-211ENST00000596457 FAM181AQ8N9Y4 354 aa10.95□□□□□ -0.66
LIG1-211ENST00000596457 KDF1Q8NAX2 398 aaPredicted RBP10.95□□□□□ -0.66
LIG1-211ENST00000596457 DCUN1D1Q96GG9 259 aa10.95□□□□□ -0.66
LIG1-211ENST00000596457 SCARF2Q96GP6 870 aaPredicted RBP10.95□□□□□ -0.66
LIG1-211ENST00000596457 CDKN2AIPNLQ96HQ2 116 aa10.95□□□□□ -0.66
LIG1-211ENST00000596457 ABCG4Q9H172 646 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms