RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 APOC2P02655 101 aa23.19■■□□□ 1.3
LSM4-204ENST00000594828 LIPCP11150 499 aa23.19■■□□□ 1.3
LSM4-204ENST00000594828 CCL4P13236 92 aa23.19■■□□□ 1.3
LSM4-204ENST00000594828 F3P13726 295 aa23.19■■□□□ 1.3
LSM4-204ENST00000594828 FECHP22830 423 aa23.19■■□□□ 1.3
LSM4-204ENST00000594828 MPSTP25325 297 aa23.19■■□□□ 1.3
LSM4-204ENST00000594828 HMGCLP35914 325 aa23.19■■□□□ 1.3
LSM4-204ENST00000594828 COPS2P61201 443 aa23.19■■□□□ 1.3
LSM4-204ENST00000594828 XRCC4Q13426 336 aa23.19■■□□□ 1.3
LSM4-204ENST00000594828 TGIF1Q15583 401 aa23.19■■□□□ 1.3
LSM4-204ENST00000594828 SIRPB2Q5JXA9 342 aa23.19■■□□□ 1.3
LSM4-204ENST00000594828 CCDC181Q5TID7 509 aa23.19■■□□□ 1.3
LSM4-204ENST00000594828 TMEM71Q6P5X7 295 aa23.19■■□□□ 1.3
LSM4-204ENST00000594828 SLC9B2Q86UD5 537 aa23.19■■□□□ 1.3
LSM4-204ENST00000594828 SLC25A41Q8N5S1 370 aa23.19■■□□□ 1.3
LSM4-204ENST00000594828 OXNAD1Q96HP4 312 aaPredicted RBP23.19■■□□□ 1.3
LSM4-204ENST00000594828 MRGPRX2Q96LB1 330 aa23.19■■□□□ 1.3
LSM4-204ENST00000594828 PLEKHG4BQ96PX9 1271 aa23.19■■□□□ 1.3
LSM4-204ENST00000594828 B3GNT4Q9C0J1 378 aa23.19■■□□□ 1.3
LSM4-204ENST00000594828 ZMYND15Q9H091 742 aa23.19■■□□□ 1.3
LSM4-204ENST00000594828 KLC4Q9NSK0 619 aa23.19■■□□□ 1.3
LSM4-204ENST00000594828 DUSP10Q9Y6W6 482 aa23.19■■□□□ 1.3
LSM4-204ENST00000594828 ZFC3H1O60293 1989 aaKnown RBP23.19■■□□□ 1.3
LSM4-204ENST00000594828 SCN8AQ9UQD0 1980 aa23.19■■□□□ 1.3
LSM4-204ENST00000594828 KIR2DS5A0A0G2JLQ3 304 aa23.18■■□□□ 1.3
LSM4-204ENST00000594828 A0A0G2JNG1 304 aa23.18■■□□□ 1.3
LSM4-204ENST00000594828 A6NCN8 305 aa23.18■■□□□ 1.3
LSM4-204ENST00000594828 C9orf172C9J069 976 aa23.18■■□□□ 1.3
LSM4-204ENST00000594828 H7C0C1 242 aa23.18■■□□□ 1.3
LSM4-204ENST00000594828 KIR2DS3K7RE56 304 aa23.18■■□□□ 1.3
LSM4-204ENST00000594828 CHUKO15111 745 aa23.18■■□□□ 1.3
LSM4-204ENST00000594828 PRB1P04280 392 aa23.18■■□□□ 1.3
LSM4-204ENST00000594828 CSF2RBP32927 897 aa23.18■■□□□ 1.3
LSM4-204ENST00000594828 CTNNA1P35221 906 aaKnown RBP23.18■■□□□ 1.3
LSM4-204ENST00000594828 ATP5OP48047 213 aa23.18■■□□□ 1.3
LSM4-204ENST00000594828 CLCNKAP51800 687 aa23.18■■□□□ 1.3
LSM4-204ENST00000594828 MPP3Q13368 585 aa23.18■■□□□ 1.3
LSM4-204ENST00000594828 NFATC2Q13469 925 aa23.18■■□□□ 1.3
LSM4-204ENST00000594828 KIR2DS5Q14953 304 aa23.18■■□□□ 1.3
LSM4-204ENST00000594828 NOMO1Q15155 1222 aa23.18■■□□□ 1.3
LSM4-204ENST00000594828 TAF1BQ53T94 588 aaPredicted RBP23.18■■□□□ 1.3
LSM4-204ENST00000594828 CRTC3Q6UUV7 619 aa23.18■■□□□ 1.3
LSM4-204ENST00000594828 AGBL5Q8NDL9 886 aa23.18■■□□□ 1.3
LSM4-204ENST00000594828 IPMKQ8NFU5 416 aa23.18■■□□□ 1.3
LSM4-204ENST00000594828 PRDM8Q9NQV8 689 aa23.18■■□□□ 1.3
LSM4-204ENST00000594828 FOXJ2Q9P0K8 574 aa23.18■■□□□ 1.3
LSM4-204ENST00000594828 TMEM9Q9P0T7 183 aa23.18■■□□□ 1.3
LSM4-204ENST00000594828 RSPH14Q9UHP6 348 aa23.18■■□□□ 1.3
LSM4-204ENST00000594828 KMOO15229 486 aa23.17■■□□□ 1.3
LSM4-204ENST00000594828 DUX1O43812 170 aa23.17■■□□□ 1.3
LSM4-204ENST00000594828 VEGFDO43915 354 aa23.17■■□□□ 1.3
LSM4-204ENST00000594828 MTX2O75431 263 aa23.17■■□□□ 1.3
LSM4-204ENST00000594828 THRAP10827 490 aa23.17■■□□□ 1.3
LSM4-204ENST00000594828 FGF3P11487 239 aaPredicted RBP23.17■■□□□ 1.3
LSM4-204ENST00000594828 RBL1P28749 1068 aa23.17■■□□□ 1.3
LSM4-204ENST00000594828 CSTF2P33240 577 aaKnown RBP eCLIP23.17■■□□□ 1.3
LSM4-204ENST00000594828 CHRNA4P43681 627 aa23.17■■□□□ 1.3
LSM4-204ENST00000594828 SLC1A5Q15758 541 aa23.17■■□□□ 1.3
LSM4-204ENST00000594828 INSCQ1MX18 579 aa23.17■■□□□ 1.3
LSM4-204ENST00000594828 LRRTM4Q86VH4 590 aa23.17■■□□□ 1.3
LSM4-204ENST00000594828 ZFAND4Q86XD8 727 aa23.17■■□□□ 1.3
LSM4-204ENST00000594828 VPS35Q96QK1 796 aa23.17■■□□□ 1.3
LSM4-204ENST00000594828 LDHAL6BQ9BYZ2 381 aaPredicted RBP23.17■■□□□ 1.3
LSM4-204ENST00000594828 OSGEPL1Q9H4B0 414 aa23.17■■□□□ 1.3
LSM4-204ENST00000594828 HACD3Q9P035 362 aa23.17■■□□□ 1.3
LSM4-204ENST00000594828 EFR3BQ9Y2G0 817 aa23.17■■□□□ 1.3
LSM4-204ENST00000594828 PCDHB11Q9Y5F2 797 aa23.17■■□□□ 1.3
LSM4-204ENST00000594828 BTNL10A8MVZ5 291 aa23.16■■□□□ 1.3
LSM4-204ENST00000594828 EFSO43281 561 aa23.16■■□□□ 1.3
LSM4-204ENST00000594828 CDK14O94921 469 aa23.16■■□□□ 1.3
LSM4-204ENST00000594828 HLA-DPA1P20036 260 aa23.16■■□□□ 1.3
LSM4-204ENST00000594828 CD82P27701 267 aa23.16■■□□□ 1.3
LSM4-204ENST00000594828 ATP13A5Q4VNC0 1218 aa23.16■■□□□ 1.3
LSM4-204ENST00000594828 ZDHHC20Q5W0Z9 365 aa23.16■■□□□ 1.3
LSM4-204ENST00000594828 PCSK4Q6UW60 755 aa23.16■■□□□ 1.3
LSM4-204ENST00000594828 RAD9BQ6WBX8 426 aa23.16■■□□□ 1.3
LSM4-204ENST00000594828 TTC30BQ8N4P2 665 aa23.16■■□□□ 1.3
LSM4-204ENST00000594828 AVL9Q8NBF6 648 aa23.16■■□□□ 1.3
LSM4-204ENST00000594828 BLOC1S5Q8TDH9 187 aa23.16■■□□□ 1.3
LSM4-204ENST00000594828 TAAR9Q96RI9 348 aa23.16■■□□□ 1.3
LSM4-204ENST00000594828 FERMT1Q9BQL6 677 aa23.16■■□□□ 1.3
LSM4-204ENST00000594828 LACRTQ9GZZ8 138 aa23.16■■□□□ 1.3
LSM4-204ENST00000594828 C10orf88Q9H8K7 445 aa23.16■■□□□ 1.3
LSM4-204ENST00000594828 IL26Q9NPH9 171 aa23.16■■□□□ 1.3
LSM4-204ENST00000594828 PDP2Q9P2J9 529 aa23.16■■□□□ 1.3
LSM4-204ENST00000594828 CPNE7Q9UBL6 633 aa23.16■■□□□ 1.3
LSM4-204ENST00000594828 SLC23A2Q9UGH3 650 aa23.16■■□□□ 1.3
LSM4-204ENST00000594828 TMPRSS11EQ9UL52 423 aa23.16■■□□□ 1.3
LSM4-204ENST00000594828 REXO2Q9Y3B8 237 aaKnown RBP23.16■■□□□ 1.3
LSM4-204ENST00000594828 CCDC66A2RUB6 948 aa23.15■■□□□ 1.3
LSM4-204ENST00000594828 ZNF7P17097 686 aaPredicted RBP23.15■■□□□ 1.3
LSM4-204ENST00000594828 OTUD4Q01804 1114 aaKnown RBP23.15■■□□□ 1.3
LSM4-204ENST00000594828 C19orf57Q0VDD7 668 aa23.15■■□□□ 1.3
LSM4-204ENST00000594828 TMEM115Q12893 351 aaPredicted RBP23.15■■□□□ 1.3
LSM4-204ENST00000594828 PLA2G4EQ3MJ16 856 aa23.15■■□□□ 1.3
LSM4-204ENST00000594828 KHDC1Q4VXA5 237 aaKnown RBP23.15■■□□□ 1.3
LSM4-204ENST00000594828 WDR74Q6RFH5 385 aaPredicted RBP23.15■■□□□ 1.3
LSM4-204ENST00000594828 CCDC112Q8NEF3 446 aa23.15■■□□□ 1.3
LSM4-204ENST00000594828 GDAP1Q8TB36 358 aa23.15■■□□□ 1.3
LSM4-204ENST00000594828 ACTL9Q8TC94 416 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms