RNA–Protein interactions for RNA: ENST00000593977.1

LINC00649-204, long intergenic non-protein coding RNA 649, humanhuman

TSL 5 BASIC

Gene LINC00649, Length 640 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-204ENST00000593977 REXO1L1PQ8IX06 675 aa4.23□□□□□ -1.73
LINC00649-204ENST00000593977 CTAGE4Q8IX94 777 aa4.23□□□□□ -1.73
LINC00649-204ENST00000593977 CDH26Q8IXH8 852 aa4.23□□□□□ -1.73
LINC00649-204ENST00000593977 MMP21Q8N119 569 aa4.23□□□□□ -1.73
LINC00649-204ENST00000593977 TC2NQ8N9U0 490 aa4.23□□□□□ -1.73
LINC00649-204ENST00000593977 NHLRC2Q8NBF2 726 aa4.23□□□□□ -1.73
LINC00649-204ENST00000593977 NOC3LQ8WTT2 800 aaKnown RBP4.23□□□□□ -1.73
LINC00649-204ENST00000593977 CASP10Q92851 521 aa4.23□□□□□ -1.73
LINC00649-204ENST00000593977 ARRDC3Q96B67 414 aa4.23□□□□□ -1.73
LINC00649-204ENST00000593977 FAM149B1Q96BN6 582 aa4.23□□□□□ -1.73
LINC00649-204ENST00000593977 SLC7A6OSQ96CW6 309 aaPredicted RBP4.23□□□□□ -1.73
LINC00649-204ENST00000593977 REXO5Q96IC2 774 aaKnown RBP4.23□□□□□ -1.73
LINC00649-204ENST00000593977 LRIG1Q96JA1 1093 aa4.23□□□□□ -1.73
LINC00649-204ENST00000593977 MAP7D2Q96T17 732 aa4.23□□□□□ -1.73
LINC00649-204ENST00000593977 TCF25Q9BQ70 676 aa4.23□□□□□ -1.73
LINC00649-204ENST00000593977 SYT3Q9BQG1 590 aa4.23□□□□□ -1.73
LINC00649-204ENST00000593977 FERMT1Q9BQL6 677 aa4.23□□□□□ -1.73
LINC00649-204ENST00000593977 PIMREGQ9BSJ6 248 aa4.23□□□□□ -1.73
LINC00649-204ENST00000593977 NUP85Q9BW27 656 aa4.23□□□□□ -1.73
LINC00649-204ENST00000593977 PLA2G12BQ9BX93 195 aa4.23□□□□□ -1.73
LINC00649-204ENST00000593977 IDI2Q9BXS1 227 aa4.23□□□□□ -1.73
LINC00649-204ENST00000593977 MTMR12Q9C0I1 747 aa4.23□□□□□ -1.73
LINC00649-204ENST00000593977 CLPBQ9H078 707 aa4.23□□□□□ -1.73
LINC00649-204ENST00000593977 KATNBL1Q9H079 304 aa4.23□□□□□ -1.73
LINC00649-204ENST00000593977 UPF3AQ9H1J1 476 aaKnown RBP4.23□□□□□ -1.73
LINC00649-204ENST00000593977 IKZF4Q9H2S9 585 aa4.23□□□□□ -1.73
LINC00649-204ENST00000593977 DENND2DQ9H6A0 471 aaPredicted RBP4.23□□□□□ -1.73
LINC00649-204ENST00000593977 NRDE2Q9H7Z3 1164 aa4.23□□□□□ -1.73
LINC00649-204ENST00000593977 INTS13Q9NVM9 706 aa4.23□□□□□ -1.73
LINC00649-204ENST00000593977 JKAMPQ9P055 326 aa4.23□□□□□ -1.73
LINC00649-204ENST00000593977 DNAJB11Q9UBS4 358 aa4.23□□□□□ -1.73
LINC00649-204ENST00000593977 HESX1Q9UBX0 185 aa4.23□□□□□ -1.73
LINC00649-204ENST00000593977 CDH7Q9ULB5 785 aa4.23□□□□□ -1.73
LINC00649-204ENST00000593977 USP22Q9UPT9 525 aa4.23□□□□□ -1.73
LINC00649-204ENST00000593977 OSGIN2Q9Y236 505 aa4.23□□□□□ -1.73
LINC00649-204ENST00000593977 SNX14Q9Y5W7 946 aa4.23□□□□□ -1.73
LINC00649-204ENST00000593977 TEX264Q9Y6I9 313 aa4.23□□□□□ -1.73
LINC00649-204ENST00000593977 FLNCQ14315 2725 aa4.23□□□□□ -1.73
LINC00649-204ENST00000593977 NF1P21359 2839 aa4.23□□□□□ -1.73
LINC00649-204ENST00000593977 APC2O95996 2303 aa4.23□□□□□ -1.73
LINC00649-204ENST00000593977 NLRC5Q86WI3 1866 aa4.22□□□□□ -1.73
LINC00649-204ENST00000593977 TRIP12Q14669 1992 aaPredicted RBP4.22□□□□□ -1.73
LINC00649-204ENST00000593977 LOC102723996A0A087X1L8 192 aa4.22□□□□□ -1.73
LINC00649-204ENST00000593977 C2orf78A6NCI8 922 aa4.22□□□□□ -1.73
LINC00649-204ENST00000593977 SLC33A1O00400 549 aaPredicted RBP4.22□□□□□ -1.73
LINC00649-204ENST00000593977 PER2O15055 1255 aa4.22□□□□□ -1.73
LINC00649-204ENST00000593977 DCLK1O15075 740 aa4.22□□□□□ -1.73
LINC00649-204ENST00000593977 CD3EAPO15446 510 aaKnown RBP4.22□□□□□ -1.73
LINC00649-204ENST00000593977 RGS10O43665 173 aa4.22□□□□□ -1.73
LINC00649-204ENST00000593977 CBFA2T3O75081 653 aa4.22□□□□□ -1.73
LINC00649-204ENST00000593977 SEC31AO94979 1220 aaKnown RBP4.22□□□□□ -1.73
LINC00649-204ENST00000593977 PRSS23O95084 383 aa4.22□□□□□ -1.73
LINC00649-204ENST00000593977 PAHP00439 452 aa4.22□□□□□ -1.73
LINC00649-204ENST00000593977 IQCF3P0C7M6 154 aa4.22□□□□□ -1.73
LINC00649-204ENST00000593977 RAP2AP10114 183 aa4.22□□□□□ -1.73
LINC00649-204ENST00000593977 CYP2C9P11712 490 aa4.22□□□□□ -1.73
LINC00649-204ENST00000593977 LYL1P12980 280 aa4.22□□□□□ -1.73
LINC00649-204ENST00000593977 HGFP14210 728 aa4.22□□□□□ -1.73
LINC00649-204ENST00000593977 NCF1P14598 390 aaPredicted RBP4.22□□□□□ -1.73
LINC00649-204ENST00000593977 PDGFRAP16234 1089 aa4.22□□□□□ -1.73
LINC00649-204ENST00000593977 IGFBP6P24592 240 aaPredicted RBP4.22□□□□□ -1.73
LINC00649-204ENST00000593977 PPP2R1AP30153 589 aa4.22□□□□□ -1.73
LINC00649-204ENST00000593977 CSF2RBP32927 897 aa4.22□□□□□ -1.73
LINC00649-204ENST00000593977 THBS4P35443 961 aa4.22□□□□□ -1.73
LINC00649-204ENST00000593977 IDUAP35475 653 aa4.22□□□□□ -1.73
LINC00649-204ENST00000593977 SOX6P35712 828 aa4.22□□□□□ -1.73
LINC00649-204ENST00000593977 PDE1AP54750 535 aa4.22□□□□□ -1.73
LINC00649-204ENST00000593977 PMP22Q01453 160 aa4.22□□□□□ -1.73
LINC00649-204ENST00000593977 DUSP8Q13202 625 aa4.22□□□□□ -1.73
LINC00649-204ENST00000593977 GPNMBQ14956 572 aa4.22□□□□□ -1.73
LINC00649-204ENST00000593977 PCOLCEQ15113 449 aa4.22□□□□□ -1.73
LINC00649-204ENST00000593977 C15orf59Q2T9L4 293 aaPredicted RBP4.22□□□□□ -1.73
LINC00649-204ENST00000593977 P3H1Q32P28 736 aa4.22□□□□□ -1.73
LINC00649-204ENST00000593977 TWISTNBQ3B726 338 aaPredicted RBP4.22□□□□□ -1.73
LINC00649-204ENST00000593977 PTCHD3Q3KNS1 767 aa4.22□□□□□ -1.73
LINC00649-204ENST00000593977 GLE1Q53GS7 698 aaKnown RBP4.22□□□□□ -1.73
LINC00649-204ENST00000593977 SHEQ5VZ18 495 aa4.22□□□□□ -1.73
LINC00649-204ENST00000593977 FAM160B1Q5W0V3 765 aa4.22□□□□□ -1.73
LINC00649-204ENST00000593977 PM20D1Q6GTS8 502 aa4.22□□□□□ -1.73
LINC00649-204ENST00000593977 JADE1Q6IE81 842 aa4.22□□□□□ -1.73
LINC00649-204ENST00000593977 CXCL17Q6UXB2 119 aa4.22□□□□□ -1.73
LINC00649-204ENST00000593977 KIAA1324Q6UXG2 1013 aaKnown RBP4.22□□□□□ -1.73
LINC00649-204ENST00000593977 PPP1R21Q6ZMI0 780 aa4.22□□□□□ -1.73
LINC00649-204ENST00000593977 PIK3AP1Q6ZUJ8 805 aa4.22□□□□□ -1.73
LINC00649-204ENST00000593977 ARMCX2Q7L311 632 aa4.22□□□□□ -1.73
LINC00649-204ENST00000593977 CAMKMTQ7Z624 323 aa4.22□□□□□ -1.73
LINC00649-204ENST00000593977 SPATA2LQ8IUW3 424 aaPredicted RBP4.22□□□□□ -1.73
LINC00649-204ENST00000593977 ABRAQ8N0Z2 381 aa4.22□□□□□ -1.73
LINC00649-204ENST00000593977 LRRC43Q8N309 656 aa4.22□□□□□ -1.73
LINC00649-204ENST00000593977 FSTL5Q8N475 847 aaPredicted RBP4.22□□□□□ -1.73
LINC00649-204ENST00000593977 BANPQ8N9N5 519 aa4.22□□□□□ -1.73
LINC00649-204ENST00000593977 RBM15BQ8NDT2 890 aaKnown RBP4.22□□□□□ -1.73
LINC00649-204ENST00000593977 NLGN4YQ8NFZ3 816 aaPredicted RBP4.22□□□□□ -1.73
LINC00649-204ENST00000593977 MDM1Q8TC05 714 aa4.22□□□□□ -1.73
LINC00649-204ENST00000593977 AGR3Q8TD06 166 aa4.22□□□□□ -1.73
LINC00649-204ENST00000593977 BPIFB1Q8TDL5 484 aa4.22□□□□□ -1.73
LINC00649-204ENST00000593977 BCAS4Q8TDM0 211 aa4.22□□□□□ -1.73
LINC00649-204ENST00000593977 PTERQ96BW5 349 aa4.22□□□□□ -1.73
LINC00649-204ENST00000593977 ALG14Q96F25 216 aa4.22□□□□□ -1.73
LINC00649-204ENST00000593977 SPATA13Q96N96 652 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms