RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 PIRTP0C851 137 aa16.13■□□□□ 0.17
LIG1-205ENST00000593425 TYRP1P17643 537 aa16.13■□□□□ 0.17
LIG1-205ENST00000593425 TCN2P20062 427 aa16.13■□□□□ 0.17
LIG1-205ENST00000593425 FOXM1Q08050 763 aa16.13■□□□□ 0.17
LIG1-205ENST00000593425 MAP7Q14244 749 aa16.13■□□□□ 0.17
LIG1-205ENST00000593425 ZNF569Q5MCW4 686 aa16.13■□□□□ 0.17
LIG1-205ENST00000593425 CRTC3Q6UUV7 619 aa16.13■□□□□ 0.17
LIG1-205ENST00000593425 ADGRG6Q86SQ4 1221 aa16.13■□□□□ 0.17
LIG1-205ENST00000593425 PLXDC1Q8IUK5 500 aa16.13■□□□□ 0.17
LIG1-205ENST00000593425 CCNYQ8ND76 341 aa16.13■□□□□ 0.17
LIG1-205ENST00000593425 C9orf72Q96LT7 481 aa16.13■□□□□ 0.17
LIG1-205ENST00000593425 TRIB3Q96RU7 358 aa16.13■□□□□ 0.17
LIG1-205ENST00000593425 CEP41Q9BYV8 373 aa16.13■□□□□ 0.17
LIG1-205ENST00000593425 TRIT1Q9H3H1 467 aaKnown RBP16.13■□□□□ 0.17
LIG1-205ENST00000593425 ZFYVE1Q9HBF4 777 aa16.13■□□□□ 0.17
LIG1-205ENST00000593425 ZNF624Q9P2J8 865 aaPredicted RBP16.13■□□□□ 0.17
LIG1-205ENST00000593425 ANKMY1Q9P2S6 941 aa16.13■□□□□ 0.17
LIG1-205ENST00000593425 SLC23A2Q9UGH3 650 aa16.13■□□□□ 0.17
LIG1-205ENST00000593425 NENFQ9UMX5 172 aa16.13■□□□□ 0.17
LIG1-205ENST00000593425 SHOC2Q9UQ13 582 aa16.13■□□□□ 0.17
LIG1-205ENST00000593425 RPS6KL1Q9Y6S9 549 aa16.13■□□□□ 0.17
LIG1-205ENST00000593425 SPTA1P02549 2419 aa16.13■□□□□ 0.17
LIG1-205ENST00000593425 CHUKO15111 745 aa16.12■□□□□ 0.17
LIG1-205ENST00000593425 SLC25A14O95258 325 aaPredicted RBP16.12■□□□□ 0.17
LIG1-205ENST00000593425 SLC4A1P02730 911 aa16.12■□□□□ 0.17
LIG1-205ENST00000593425 XRCC1P18887 633 aaPredicted RBP16.12■□□□□ 0.17
LIG1-205ENST00000593425 MX2P20592 715 aa16.12■□□□□ 0.17
LIG1-205ENST00000593425 ANP32AP39687 249 aaKnown RBP16.12■□□□□ 0.17
LIG1-205ENST00000593425 SLC19A1P41440 591 aa16.12■□□□□ 0.17
LIG1-205ENST00000593425 LEPRP48357 1165 aaKnown RBP16.12■□□□□ 0.17
LIG1-205ENST00000593425 SH3BP2P78314 561 aa16.12■□□□□ 0.17
LIG1-205ENST00000593425 IFI35P80217 286 aaPredicted RBP16.12■□□□□ 0.17
LIG1-205ENST00000593425 PPIDQ08752 370 aaKnown RBP16.12■□□□□ 0.17
LIG1-205ENST00000593425 SEPT7Q16181 437 aaKnown RBP16.12■□□□□ 0.17
LIG1-205ENST00000593425 INSCQ1MX18 579 aa16.12■□□□□ 0.17
LIG1-205ENST00000593425 TMEM26Q6ZUK4 368 aa16.12■□□□□ 0.17
LIG1-205ENST00000593425 ESX1Q8N693 406 aa16.12■□□□□ 0.17
LIG1-205ENST00000593425 AVL9Q8NBF6 648 aa16.12■□□□□ 0.17
LIG1-205ENST00000593425 CPLX3Q8WVH0 158 aa16.12■□□□□ 0.17
LIG1-205ENST00000593425 APOBEC4Q8WW27 367 aaKnown RBP16.12■□□□□ 0.17
LIG1-205ENST00000593425 RAPGEF5Q92565 580 aa16.12■□□□□ 0.17
LIG1-205ENST00000593425 TGM7Q96PF1 710 aa16.12■□□□□ 0.17
LIG1-205ENST00000593425 ULBP3Q9BZM4 244 aa16.12■□□□□ 0.17
LIG1-205ENST00000593425 UCK1Q9HA47 277 aa16.12■□□□□ 0.17
LIG1-205ENST00000593425 TRIM39Q9HCM9 518 aa16.12■□□□□ 0.17
LIG1-205ENST00000593425 CTTNBP2NLQ9P2B4 639 aa16.12■□□□□ 0.17
LIG1-205ENST00000593425 DNAJC16Q9Y2G8 782 aa16.12■□□□□ 0.17
LIG1-205ENST00000593425 MAST4O15021 2626 aa16.11■□□□□ 0.17
LIG1-205ENST00000593425 PRR19A6NJB7 356 aa16.11■□□□□ 0.17
LIG1-205ENST00000593425 MTX2O75431 263 aa16.11■□□□□ 0.17
LIG1-205ENST00000593425 MTA2O94776 668 aa16.11■□□□□ 0.17
LIG1-205ENST00000593425 UBXN7O94888 489 aa16.11■□□□□ 0.17
LIG1-205ENST00000593425 VIPP01282 170 aa16.11■□□□□ 0.17
LIG1-205ENST00000593425 NR1D1P20393 614 aa16.11■□□□□ 0.17
LIG1-205ENST00000593425 DLSTP36957 453 aa16.11■□□□□ 0.17
LIG1-205ENST00000593425 SEPHS1P49903 392 aa16.11■□□□□ 0.17
LIG1-205ENST00000593425 DCDC1P59894 354 aa16.11■□□□□ 0.17
LIG1-205ENST00000593425 ZBED6P86452 979 aa16.11■□□□□ 0.17
LIG1-205ENST00000593425 FANCCQ00597 558 aa16.11■□□□□ 0.17
LIG1-205ENST00000593425 MC1RQ01726 317 aa16.11■□□□□ 0.17
LIG1-205ENST00000593425 UBAP2LQ14157 1087 aaKnown RBP16.11■□□□□ 0.17
LIG1-205ENST00000593425 KHDC1Q4VXA5 237 aaKnown RBP16.11■□□□□ 0.17
LIG1-205ENST00000593425 CRTC2Q53ET0 693 aaPredicted RBP16.11■□□□□ 0.17
LIG1-205ENST00000593425 LACTB2Q53H82 288 aaPredicted RBP16.11■□□□□ 0.17
LIG1-205ENST00000593425 MAP7D3Q8IWC1 876 aa16.11■□□□□ 0.17
LIG1-205ENST00000593425 TRAM1L1Q8N609 369 aa16.11■□□□□ 0.17
LIG1-205ENST00000593425 PLD5Q8N7P1 536 aa16.11■□□□□ 0.17
LIG1-205ENST00000593425 GALNT6Q8NCL4 622 aa16.11■□□□□ 0.17
LIG1-205ENST00000593425 RSC1A1Q92681 617 aa16.11■□□□□ 0.17
LIG1-205ENST00000593425 GLYATL1Q969I3 302 aa16.11■□□□□ 0.17
LIG1-205ENST00000593425 RNF157Q96PX1 679 aa16.11■□□□□ 0.17
LIG1-205ENST00000593425 ZSCAN5AQ9BUG6 496 aa16.11■□□□□ 0.17
LIG1-205ENST00000593425 PACSIN1Q9BY11 444 aa16.11■□□□□ 0.17
LIG1-205ENST00000593425 ADGRE3Q9BY15 652 aa16.11■□□□□ 0.17
LIG1-205ENST00000593425 ZNF768Q9H5H4 540 aaKnown RBP16.11■□□□□ 0.17
LIG1-205ENST00000593425 NFKBIL1Q9UBC1 381 aaPredicted RBP16.11■□□□□ 0.17
LIG1-205ENST00000593425 CROTQ9UKG9 612 aa16.11■□□□□ 0.17
LIG1-205ENST00000593425 CAPN11Q9UMQ6 739 aa16.11■□□□□ 0.17
LIG1-205ENST00000593425 ZNF711Q9Y462 761 aa16.11■□□□□ 0.17
LIG1-205ENST00000593425 DOPEY2Q9Y3R5 2298 aa16.1■□□□□ 0.17
LIG1-205ENST00000593425 CLEC18AA5D8T8 446 aa16.1■□□□□ 0.17
LIG1-205ENST00000593425 PDZK1P1A8MUH7 402 aa16.1■□□□□ 0.17
LIG1-205ENST00000593425 GPR89AB7ZAQ6 455 aa16.1■□□□□ 0.17
LIG1-205ENST00000593425 K7EM74 188 aa16.1■□□□□ 0.17
LIG1-205ENST00000593425 KRT7P08729 469 aa16.1■□□□□ 0.17
LIG1-205ENST00000593425 FURINP09958 794 aa16.1■□□□□ 0.17
LIG1-205ENST00000593425 GPR89BP0CG08 455 aa16.1■□□□□ 0.17
LIG1-205ENST00000593425 BRAFP15056 766 aa16.1■□□□□ 0.17
LIG1-205ENST00000593425 ZNF7P17097 686 aaPredicted RBP16.1■□□□□ 0.17
LIG1-205ENST00000593425 KDELR1P24390 212 aa16.1■□□□□ 0.17
LIG1-205ENST00000593425 ZFYVE27Q5T4F4 411 aa16.1■□□□□ 0.17
LIG1-205ENST00000593425 CAVIN1Q6NZI2 390 aaKnown RBP16.1■□□□□ 0.17
LIG1-205ENST00000593425 CLEC18BQ6UXF7 455 aa16.1■□□□□ 0.17
LIG1-205ENST00000593425 TMC3Q7Z5M5 1100 aa16.1■□□□□ 0.17
LIG1-205ENST00000593425 LRRTM4Q86VH4 590 aa16.1■□□□□ 0.17
LIG1-205ENST00000593425 ZNF547Q8IVP9 402 aa16.1■□□□□ 0.17
LIG1-205ENST00000593425 TRIM48Q8IWZ4 208 aa16.1■□□□□ 0.17
LIG1-205ENST00000593425 CLEC18CQ8NCF0 446 aa16.1■□□□□ 0.17
LIG1-205ENST00000593425 ZNF830Q96NB3 372 aaPredicted RBP16.1■□□□□ 0.17
LIG1-205ENST00000593425 OR6C1Q96RD1 312 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms