RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 NAF1Q96HR8 494 aaKnown RBP4.95□□□□□ -1.62
SMAD4-216ENST00000593223 NCAPGQ9BPX3 1015 aa4.95□□□□□ -1.62
SMAD4-216ENST00000593223 TRIM6Q9C030 488 aaPredicted RBP4.95□□□□□ -1.62
SMAD4-216ENST00000593223 SELENONQ9NZV5 590 aa4.95□□□□□ -1.62
SMAD4-216ENST00000593223 RCOR1Q9UKL0 485 aa4.95□□□□□ -1.62
SMAD4-216ENST00000593223 CDC14AQ9UNH5 594 aa4.95□□□□□ -1.62
SMAD4-216ENST00000593223 GCC2Q8IWJ2 1684 aa4.95□□□□□ -1.62
SMAD4-216ENST00000593223 ARHGEF5Q12774 1597 aa4.95□□□□□ -1.62
SMAD4-216ENST00000593223 IGSF1Q8N6C5 1336 aa4.95□□□□□ -1.62
SMAD4-216ENST00000593223 PXDNLA1KZ92 1463 aa4.94□□□□□ -1.62
SMAD4-216ENST00000593223 CCDC18Q5T9S5 1454 aa4.94□□□□□ -1.62
SMAD4-216ENST00000593223 NRXN3Q9Y4C0 1643 aa4.94□□□□□ -1.62
SMAD4-216ENST00000593223 MEGF6O75095 1541 aa4.94□□□□□ -1.62
SMAD4-216ENST00000593223 TOPAZ1Q8N9V7 1692 aa4.94□□□□□ -1.62
SMAD4-216ENST00000593223 IGLV5-52A0A0A0MRZ9 124 aa4.94□□□□□ -1.62
SMAD4-216ENST00000593223 IFNL4K9M1U5 179 aa4.94□□□□□ -1.62
SMAD4-216ENST00000593223 HSPA12AO43301 675 aa4.94□□□□□ -1.62
SMAD4-216ENST00000593223 USO1O60763 962 aaKnown RBP4.94□□□□□ -1.62
SMAD4-216ENST00000593223 DNTTP04053 509 aa4.94□□□□□ -1.62
SMAD4-216ENST00000593223 P4HA1P13674 534 aa4.94□□□□□ -1.62
SMAD4-216ENST00000593223 PLA2G2AP14555 144 aa4.94□□□□□ -1.62
SMAD4-216ENST00000593223 AGAP20933 346 aa4.94□□□□□ -1.62
SMAD4-216ENST00000593223 STX2P32856 288 aa4.94□□□□□ -1.62
SMAD4-216ENST00000593223 CCR9P51686 369 aa4.94□□□□□ -1.62
SMAD4-216ENST00000593223 MAP2K1Q02750 393 aaPredicted RBP4.94□□□□□ -1.62
SMAD4-216ENST00000593223 TRAF3Q13114 568 aa4.94□□□□□ -1.62
SMAD4-216ENST00000593223 XKR9Q5GH70 373 aa4.94□□□□□ -1.62
SMAD4-216ENST00000593223 CCDC30Q5VVM6 783 aa4.94□□□□□ -1.62
SMAD4-216ENST00000593223 NADSYN1Q6IA69 706 aa4.94□□□□□ -1.62
SMAD4-216ENST00000593223 INO80CQ6PI98 192 aaPredicted RBP4.94□□□□□ -1.62
SMAD4-216ENST00000593223 UNC5DQ6UXZ4 953 aa4.94□□□□□ -1.62
SMAD4-216ENST00000593223 BTN2A1Q7KYR7 527 aa4.94□□□□□ -1.62
SMAD4-216ENST00000593223 GSTA5Q7RTV2 222 aa4.94□□□□□ -1.62
SMAD4-216ENST00000593223 IQCA1Q86XH1 822 aa4.94□□□□□ -1.62
SMAD4-216ENST00000593223 VSIG1Q86XK7 387 aa4.94□□□□□ -1.62
SMAD4-216ENST00000593223 GALNT13Q8IUC8 556 aa4.94□□□□□ -1.62
SMAD4-216ENST00000593223 SLC35F3Q8IY50 421 aa4.94□□□□□ -1.62
SMAD4-216ENST00000593223 ZBTB2Q8N680 514 aa4.94□□□□□ -1.62
SMAD4-216ENST00000593223 METTL6Q8TCB7 284 aa4.94□□□□□ -1.62
SMAD4-216ENST00000593223 PABPC5Q96DU9 382 aaKnown RBP4.94□□□□□ -1.62
SMAD4-216ENST00000593223 RADILQ96JH8 1075 aa4.94□□□□□ -1.62
SMAD4-216ENST00000593223 TIGD1Q96MW7 591 aa4.94□□□□□ -1.62
SMAD4-216ENST00000593223 NR1H4Q96RI1 486 aaPredicted RBP4.94□□□□□ -1.62
SMAD4-216ENST00000593223 FIZ1Q96SL8 496 aa4.94□□□□□ -1.62
SMAD4-216ENST00000593223 PAIP2Q9BPZ3 127 aaKnown RBP4.94□□□□□ -1.62
SMAD4-216ENST00000593223 USP44Q9H0E7 712 aa4.94□□□□□ -1.62
SMAD4-216ENST00000593223 GPR108Q9NPR9 543 aa4.94□□□□□ -1.62
SMAD4-216ENST00000593223 RAI14Q9P0K7 980 aa4.94□□□□□ -1.62
SMAD4-216ENST00000593223 AGTPBP1Q9UPW5 1226 aa4.94□□□□□ -1.62
SMAD4-216ENST00000593223 AAR2Q9Y312 384 aaKnown RBP4.94□□□□□ -1.62
SMAD4-216ENST00000593223 KNSTRNQ9Y448 316 aa4.94□□□□□ -1.62
SMAD4-216ENST00000593223 SNX9Q9Y5X1 595 aa4.94□□□□□ -1.62
SMAD4-216ENST00000593223 OVOS2A0A0G2JMS6 1433 aa4.94□□□□□ -1.62
SMAD4-216ENST00000593223 OVOS2A0A0J9YW53 1432 aa4.94□□□□□ -1.62
SMAD4-216ENST00000593223 OVOS2Q6IE36 1432 aa4.94□□□□□ -1.62
SMAD4-216ENST00000593223 C10orf71Q711Q0 1435 aa4.94□□□□□ -1.62
SMAD4-216ENST00000593223 PAPPAQ13219 1627 aa4.94□□□□□ -1.62
SMAD4-216ENST00000593223 EIF2AK4Q9P2K8 1649 aaKnown RBP4.94□□□□□ -1.62
SMAD4-216ENST00000593223 A0A087X0M5 115 aa4.93□□□□□ -1.62
SMAD4-216ENST00000593223 A0A0U1RQJ8 604 aa4.93□□□□□ -1.62
SMAD4-216ENST00000593223 A0A1B0GX30 115 aa4.93□□□□□ -1.62
SMAD4-216ENST00000593223 A0A1W2PQM1 296 aa4.93□□□□□ -1.62
SMAD4-216ENST00000593223 CCDC144AA2RUR9 1427 aa4.93□□□□□ -1.62
SMAD4-216ENST00000593223 FAM25EA8MYX2 175 aa4.93□□□□□ -1.62
SMAD4-216ENST00000593223 H7C0S8 307 aa4.93□□□□□ -1.62
SMAD4-216ENST00000593223 P4HA2O15460 535 aa4.93□□□□□ -1.62
SMAD4-216ENST00000593223 B3GALNT1O75752 331 aa4.93□□□□□ -1.62
SMAD4-216ENST00000593223 RTN3O95197 1032 aaPredicted RBP4.93□□□□□ -1.62
SMAD4-216ENST00000593223 TBX18O95935 607 aa4.93□□□□□ -1.62
SMAD4-216ENST00000593223 SPARCP09486 303 aa4.93□□□□□ -1.62
SMAD4-216ENST00000593223 RPS2P15880 293 aaKnown RBP4.93□□□□□ -1.62
SMAD4-216ENST00000593223 SHMT1P34896 483 aa4.93□□□□□ -1.62
SMAD4-216ENST00000593223 TRPC1P48995 793 aa4.93□□□□□ -1.62
SMAD4-216ENST00000593223 DCAF7P61962 342 aa4.93□□□□□ -1.62
SMAD4-216ENST00000593223 BNC1Q01954 994 aa4.93□□□□□ -1.62
SMAD4-216ENST00000593223 SCARB2Q14108 478 aa4.93□□□□□ -1.62
SMAD4-216ENST00000593223 NFATC4Q14934 902 aa4.93□□□□□ -1.62
SMAD4-216ENST00000593223 TNIP1Q15025 636 aa4.93□□□□□ -1.62
SMAD4-216ENST00000593223 SLC39A14Q15043 492 aa4.93□□□□□ -1.62
SMAD4-216ENST00000593223 TAF7Q15545 349 aaPredicted RBP4.93□□□□□ -1.62
SMAD4-216ENST00000593223 ASIC2Q16515 512 aa4.93□□□□□ -1.62
SMAD4-216ENST00000593223 IZUMO4Q1ZYL8 232 aa4.93□□□□□ -1.62
SMAD4-216ENST00000593223 SGO1Q5FBB7 561 aa4.93□□□□□ -1.62
SMAD4-216ENST00000593223 RUSC1-AS1Q66K80 236 aa4.93□□□□□ -1.62
SMAD4-216ENST00000593223 CDC73Q6P1J9 531 aa4.93□□□□□ -1.62
SMAD4-216ENST00000593223 C16orf87Q6PH81 154 aa4.93□□□□□ -1.62
SMAD4-216ENST00000593223 B3GNT6Q6ZMB0 384 aa4.93□□□□□ -1.62
SMAD4-216ENST00000593223 LINGO2Q7L985 606 aa4.93□□□□□ -1.62
SMAD4-216ENST00000593223 CPLX4Q7Z7G2 160 aa4.93□□□□□ -1.62
SMAD4-216ENST00000593223 DIS3L2Q8IYB7 885 aaKnown RBP4.93□□□□□ -1.62
SMAD4-216ENST00000593223 DSELQ8IZU8 1212 aa4.93□□□□□ -1.62
SMAD4-216ENST00000593223 HUS1BQ8NHY5 278 aa4.93□□□□□ -1.62
SMAD4-216ENST00000593223 RFFLQ8WZ73 363 aa4.93□□□□□ -1.62
SMAD4-216ENST00000593223 GTF3C6Q969F1 213 aa4.93□□□□□ -1.62
SMAD4-216ENST00000593223 SMARCE1Q969G3 411 aa4.93□□□□□ -1.62
SMAD4-216ENST00000593223 JAKMIP2Q96AA8 810 aa4.93□□□□□ -1.62
SMAD4-216ENST00000593223 RTP4Q96DX8 246 aa4.93□□□□□ -1.62
SMAD4-216ENST00000593223 OR1F2PQ96R84 312 aa4.93□□□□□ -1.62
SMAD4-216ENST00000593223 KXD1Q9BQD3 176 aa4.93□□□□□ -1.62
SMAD4-216ENST00000593223 POLR3CQ9BUI4 534 aaPredicted RBP4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms