RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 APMAPQ9HDC9 416 aa20.21■□□□□ 0.83
TRIM47-207ENST00000593089 SSU72P8A0A1W2PR75 194 aa20.2■□□□□ 0.82
TRIM47-207ENST00000593089 ZNF487B1APH4 448 aa20.2■□□□□ 0.82
TRIM47-207ENST00000593089 PPP1R12AO14974 1030 aaPredicted RBP20.2■□□□□ 0.82
TRIM47-207ENST00000593089 MTA2O94776 668 aa20.2■□□□□ 0.82
TRIM47-207ENST00000593089 DCDC1P59894 354 aa20.2■□□□□ 0.82
TRIM47-207ENST00000593089 DYNLT1P63172 113 aa20.2■□□□□ 0.82
TRIM47-207ENST00000593089 CDK18Q07002 472 aa20.2■□□□□ 0.82
TRIM47-207ENST00000593089 INSCQ1MX18 579 aa20.2■□□□□ 0.82
TRIM47-207ENST00000593089 CEACAM20Q6UY09 585 aa20.2■□□□□ 0.82
TRIM47-207ENST00000593089 ATG14Q6ZNE5 492 aa20.2■□□□□ 0.82
TRIM47-207ENST00000593089 TMC3Q7Z5M5 1100 aa20.2■□□□□ 0.82
TRIM47-207ENST00000593089 NLGN4XQ8N0W4 816 aa20.2■□□□□ 0.82
TRIM47-207ENST00000593089 TRAM1L1Q8N609 369 aa20.2■□□□□ 0.82
TRIM47-207ENST00000593089 NLGN4YQ8NFZ3 816 aaPredicted RBP20.2■□□□□ 0.82
TRIM47-207ENST00000593089 SPATA22Q8NHS9 363 aa20.2■□□□□ 0.82
TRIM47-207ENST00000593089 GLYATL1Q969I3 302 aa20.2■□□□□ 0.82
TRIM47-207ENST00000593089 OLFM3Q96PB7 478 aa20.2■□□□□ 0.82
TRIM47-207ENST00000593089 PLEKHG4BQ96PX9 1271 aa20.2■□□□□ 0.82
TRIM47-207ENST00000593089 SLC25A51Q9H1U9 297 aa20.2■□□□□ 0.82
TRIM47-207ENST00000593089 RAD18Q9NS91 495 aa20.2■□□□□ 0.82
TRIM47-207ENST00000593089 SPTLC3Q9NUV7 552 aa20.2■□□□□ 0.82
TRIM47-207ENST00000593089 ZNHIT6Q9NWK9 470 aaKnown RBP20.2■□□□□ 0.82
TRIM47-207ENST00000593089 GEMIN8Q9NWZ8 242 aaKnown RBP20.2■□□□□ 0.82
TRIM47-207ENST00000593089 SCHIP1Q9P0W5 487 aaPredicted RBP20.2■□□□□ 0.82
TRIM47-207ENST00000593089 SLC23A2Q9UGH3 650 aa20.2■□□□□ 0.82
TRIM47-207ENST00000593089 MYO18BQ8IUG5 2567 aa20.2■□□□□ 0.82
TRIM47-207ENST00000593089 BSNQ9UPA5 3926 aa20.2■□□□□ 0.82
TRIM47-207ENST00000593089 MTX2O75431 263 aa20.19■□□□□ 0.82
TRIM47-207ENST00000593089 MT-CYBP00156 380 aaPredicted RBP20.19■□□□□ 0.82
TRIM47-207ENST00000593089 TNNT1P13805 278 aa20.19■□□□□ 0.82
TRIM47-207ENST00000593089 ARHGAP25P42331 645 aa20.19■□□□□ 0.82
TRIM47-207ENST00000593089 CLCNKAP51800 687 aa20.19■□□□□ 0.82
TRIM47-207ENST00000593089 UBE2IP63279 158 aaKnown RBP20.19■□□□□ 0.82
TRIM47-207ENST00000593089 SEPT7Q16181 437 aaKnown RBP20.19■□□□□ 0.82
TRIM47-207ENST00000593089 ODF2Q5BJF6 829 aa20.19■□□□□ 0.82
TRIM47-207ENST00000593089 UNC5BQ8IZJ1 945 aa20.19■□□□□ 0.82
TRIM47-207ENST00000593089 AVL9Q8NBF6 648 aa20.19■□□□□ 0.82
TRIM47-207ENST00000593089 CHP1Q99653 195 aa20.19■□□□□ 0.82
TRIM47-207ENST00000593089 ZPBPQ9BS86 351 aa20.19■□□□□ 0.82
TRIM47-207ENST00000593089 SPRY4Q9C004 299 aa20.19■□□□□ 0.82
TRIM47-207ENST00000593089 SLC25A18Q9H1K4 315 aa20.19■□□□□ 0.82
TRIM47-207ENST00000593089 EPB41L1Q9H4G0 881 aa20.19■□□□□ 0.82
TRIM47-207ENST00000593089 GPN2Q9H9Y4 310 aaPredicted RBP20.19■□□□□ 0.82
TRIM47-207ENST00000593089 FBXO8Q9NRD0 319 aa20.19■□□□□ 0.82
TRIM47-207ENST00000593089 DNAJC16Q9Y2G8 782 aa20.19■□□□□ 0.82
TRIM47-207ENST00000593089 BOD1L1Q8NFC6 3051 aa20.19■□□□□ 0.82
TRIM47-207ENST00000593089 LOC101059948A0A1B0GTJ6 334 aa20.18■□□□□ 0.82
TRIM47-207ENST00000593089 LILRA5A6NI73 299 aa20.18■□□□□ 0.82
TRIM47-207ENST00000593089 ZNF891A8MT65 544 aaPredicted RBP20.18■□□□□ 0.82
TRIM47-207ENST00000593089 PDZK1P1A8MUH7 402 aa20.18■□□□□ 0.82
TRIM47-207ENST00000593089 GPR89AB7ZAQ6 455 aa20.18■□□□□ 0.82
TRIM47-207ENST00000593089 CHUKO15111 745 aa20.18■□□□□ 0.82
TRIM47-207ENST00000593089 SUV39H1O43463 412 aa20.18■□□□□ 0.82
TRIM47-207ENST00000593089 VIPP01282 170 aa20.18■□□□□ 0.82
TRIM47-207ENST00000593089 GPR89BP0CG08 455 aa20.18■□□□□ 0.82
TRIM47-207ENST00000593089 ZFXP17010 805 aaPredicted RBP20.18■□□□□ 0.82
TRIM47-207ENST00000593089 BPIP17213 487 aa20.18■□□□□ 0.82
TRIM47-207ENST00000593089 MAP4P27816 1152 aaKnown RBP20.18■□□□□ 0.82
TRIM47-207ENST00000593089 GFERP55789 205 aa20.18■□□□□ 0.82
TRIM47-207ENST00000593089 POLE2P56282 527 aa20.18■□□□□ 0.82
TRIM47-207ENST00000593089 TRIM14Q14142 442 aa20.18■□□□□ 0.82
TRIM47-207ENST00000593089 TIPARPQ7Z3E1 657 aaKnown RBP20.18■□□□□ 0.82
TRIM47-207ENST00000593089 LRRTM4Q86VH4 590 aa20.18■□□□□ 0.82
TRIM47-207ENST00000593089 VSIG1Q86XK7 387 aa20.18■□□□□ 0.82
TRIM47-207ENST00000593089 PLXDC1Q8IUK5 500 aa20.18■□□□□ 0.82
TRIM47-207ENST00000593089 TRIM48Q8IWZ4 208 aa20.18■□□□□ 0.82
TRIM47-207ENST00000593089 RHOT2Q8IXI1 618 aa20.18■□□□□ 0.82
TRIM47-207ENST00000593089 KIAA1143Q96AT1 154 aaPredicted RBP20.18■□□□□ 0.82
TRIM47-207ENST00000593089 TADA1Q96BN2 335 aa20.18■□□□□ 0.82
TRIM47-207ENST00000593089 GLOD4Q9HC38 313 aa20.18■□□□□ 0.82
TRIM47-207ENST00000593089 UBP1Q9NZI7 540 aa20.18■□□□□ 0.82
TRIM47-207ENST00000593089 NFKBIL1Q9UBC1 381 aaPredicted RBP20.18■□□□□ 0.82
TRIM47-207ENST00000593089 IL17BQ9UHF5 180 aa20.18■□□□□ 0.82
TRIM47-207ENST00000593089 HYOU1Q9Y4L1 999 aa20.18■□□□□ 0.82
TRIM47-207ENST00000593089 SPO11Q9Y5K1 396 aa20.18■□□□□ 0.82
TRIM47-207ENST00000593089 TERTO14746 1132 aaKnown RBP20.17■□□□□ 0.82
TRIM47-207ENST00000593089 POLR1CO15160 346 aaPredicted RBP20.17■□□□□ 0.82
TRIM47-207ENST00000593089 KMOO15229 486 aa20.17■□□□□ 0.82
TRIM47-207ENST00000593089 NKX2-8O15522 239 aa20.17■□□□□ 0.82
TRIM47-207ENST00000593089 PMPCBO75439 489 aa20.17■□□□□ 0.82
TRIM47-207ENST00000593089 STK17BO94768 372 aa20.17■□□□□ 0.82
TRIM47-207ENST00000593089 ZNF7P17097 686 aaPredicted RBP20.17■□□□□ 0.82
TRIM47-207ENST00000593089 TYRP1P17643 537 aa20.17■□□□□ 0.82
TRIM47-207ENST00000593089 XRCC1P18887 633 aaPredicted RBP20.17■□□□□ 0.82
TRIM47-207ENST00000593089 NOP2P46087 812 aaKnown RBP20.17■□□□□ 0.82
TRIM47-207ENST00000593089 CSRP3P50461 194 aa20.17■□□□□ 0.82
TRIM47-207ENST00000593089 PDPK2PQ6A1A2 396 aa20.17■□□□□ 0.82
TRIM47-207ENST00000593089 CCDC70Q6NSX1 233 aa20.17■□□□□ 0.82
TRIM47-207ENST00000593089 RNF31Q96EP0 1072 aa20.17■□□□□ 0.82
TRIM47-207ENST00000593089 SLC45A3Q96JT2 553 aa20.17■□□□□ 0.82
TRIM47-207ENST00000593089 CCDC42Q96M95 316 aa20.17■□□□□ 0.82
TRIM47-207ENST00000593089 ADNPQ9H2P0 1102 aa20.17■□□□□ 0.82
TRIM47-207ENST00000593089 BPIFA1Q9NP55 256 aa20.17■□□□□ 0.82
TRIM47-207ENST00000593089 ABHD10Q9NUJ1 306 aa20.17■□□□□ 0.82
TRIM47-207ENST00000593089 OGFRQ9NZT2 677 aa20.17■□□□□ 0.82
TRIM47-207ENST00000593089 ZNF624Q9P2J8 865 aaPredicted RBP20.17■□□□□ 0.82
TRIM47-207ENST00000593089 MN1Q10571 1320 aaPredicted RBP20.17■□□□□ 0.82
TRIM47-207ENST00000593089 ZNF106Q9H2Y7 1883 aaKnown RBP20.17■□□□□ 0.82
TRIM47-207ENST00000593089 A0A0A6YYK5 440 aaPredicted RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms