RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 ETV5P41161 510 aa13.71□□□□□ -0.21
APOC1-208ENST00000592535 CETN2P41208 172 aa13.71□□□□□ -0.21
APOC1-208ENST00000592535 GEMP55040 296 aa13.71□□□□□ -0.21
APOC1-208ENST00000592535 KIF5AQ12840 1032 aa13.71□□□□□ -0.21
APOC1-208ENST00000592535 C16orf72Q14CZ0 275 aa13.71□□□□□ -0.21
APOC1-208ENST00000592535 CLPPQ16740 277 aaPredicted RBP13.71□□□□□ -0.21
APOC1-208ENST00000592535 PLA2G4EQ3MJ16 856 aa13.71□□□□□ -0.21
APOC1-208ENST00000592535 ATP13A5Q4VNC0 1218 aa13.71□□□□□ -0.21
APOC1-208ENST00000592535 SOWAHCQ53LP3 525 aaPredicted RBP13.71□□□□□ -0.21
APOC1-208ENST00000592535 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.71□□□□□ -0.21
APOC1-208ENST00000592535 ITPRIPL1Q6GPH6 555 aa13.71□□□□□ -0.21
APOC1-208ENST00000592535 PEX26Q7Z412 305 aa13.71□□□□□ -0.21
APOC1-208ENST00000592535 GLT6D1Q7Z4J2 308 aa13.71□□□□□ -0.21
APOC1-208ENST00000592535 JAMLQ86YT9 394 aa13.71□□□□□ -0.21
APOC1-208ENST00000592535 BBC3Q96PG8 261 aaPredicted RBP13.71□□□□□ -0.21
APOC1-208ENST00000592535 VPS35Q96QK1 796 aa13.71□□□□□ -0.21
APOC1-208ENST00000592535 FICDQ9BVA6 458 aa13.71□□□□□ -0.21
APOC1-208ENST00000592535 FSD1LQ9BXM9 530 aa13.71□□□□□ -0.21
APOC1-208ENST00000592535 KLC4Q9NSK0 619 aa13.71□□□□□ -0.21
APOC1-208ENST00000592535 KCNK4Q9NYG8 393 aa13.71□□□□□ -0.21
APOC1-208ENST00000592535 HACD3Q9P035 362 aa13.71□□□□□ -0.21
APOC1-208ENST00000592535 IL17CQ9P0M4 197 aa13.71□□□□□ -0.21
APOC1-208ENST00000592535 IGHV5-10-1A0A0J9YXX1 117 aa13.7□□□□□ -0.22
APOC1-208ENST00000592535 GPR89AB7ZAQ6 455 aa13.7□□□□□ -0.22
APOC1-208ENST00000592535 CHUKO15111 745 aa13.7□□□□□ -0.22
APOC1-208ENST00000592535 DDX3YO15523 660 aaKnown RBP13.7□□□□□ -0.22
APOC1-208ENST00000592535 ANXA9O76027 345 aa13.7□□□□□ -0.22
APOC1-208ENST00000592535 TJP3O95049 919 aa13.7□□□□□ -0.22
APOC1-208ENST00000592535 FTCDO95954 541 aa13.7□□□□□ -0.22
APOC1-208ENST00000592535 AGTP01019 485 aa13.7□□□□□ -0.22
APOC1-208ENST00000592535 GPR89BP0CG08 455 aa13.7□□□□□ -0.22
APOC1-208ENST00000592535 F3P13726 295 aa13.7□□□□□ -0.22
APOC1-208ENST00000592535 PSMB4P28070 264 aa13.7□□□□□ -0.22
APOC1-208ENST00000592535 CLCNKAP51800 687 aa13.7□□□□□ -0.22
APOC1-208ENST00000592535 CXADRP78310 365 aa13.7□□□□□ -0.22
APOC1-208ENST00000592535 HHEXQ03014 270 aa13.7□□□□□ -0.22
APOC1-208ENST00000592535 CFHR1Q03591 330 aa13.7□□□□□ -0.22
APOC1-208ENST00000592535 OLIG2Q13516 323 aa13.7□□□□□ -0.22
APOC1-208ENST00000592535 ANKRD20A2Q5SQ80 823 aa13.7□□□□□ -0.22
APOC1-208ENST00000592535 ANKRD20A1Q5TYW2 823 aa13.7□□□□□ -0.22
APOC1-208ENST00000592535 ANKRD20A3Q5VUR7 823 aa13.7□□□□□ -0.22
APOC1-208ENST00000592535 BROXQ5VW32 411 aa13.7□□□□□ -0.22
APOC1-208ENST00000592535 IYDQ6PHW0 289 aa13.7□□□□□ -0.22
APOC1-208ENST00000592535 DARS2Q6PI48 645 aaKnown RBP13.7□□□□□ -0.22
APOC1-208ENST00000592535 SYCE1Q8N0S2 351 aa13.7□□□□□ -0.22
APOC1-208ENST00000592535 RCBTB1Q8NDN9 531 aa13.7□□□□□ -0.22
APOC1-208ENST00000592535 CCDC110Q8TBZ0 833 aa13.7□□□□□ -0.22
APOC1-208ENST00000592535 TMEM159Q96B96 161 aa13.7□□□□□ -0.22
APOC1-208ENST00000592535 CCDC97Q96F63 343 aaPredicted RBP13.7□□□□□ -0.22
APOC1-208ENST00000592535 CCDC74BQ96LY2 380 aa13.7□□□□□ -0.22
APOC1-208ENST00000592535 SLC38A3Q99624 504 aa13.7□□□□□ -0.22
APOC1-208ENST00000592535 CMKLR1Q99788 373 aa13.7□□□□□ -0.22
APOC1-208ENST00000592535 APOL2Q9BQE5 337 aa13.7□□□□□ -0.22
APOC1-208ENST00000592535 FERMT1Q9BQL6 677 aa13.7□□□□□ -0.22
APOC1-208ENST00000592535 DPH1Q9BZG8 443 aa13.7□□□□□ -0.22
APOC1-208ENST00000592535 OSGEPL1Q9H4B0 414 aa13.7□□□□□ -0.22
APOC1-208ENST00000592535 CPNE5Q9HCH3 593 aa13.7□□□□□ -0.22
APOC1-208ENST00000592535 SARS2Q9NP81 518 aaKnown RBP13.7□□□□□ -0.22
APOC1-208ENST00000592535 IL26Q9NPH9 171 aa13.7□□□□□ -0.22
APOC1-208ENST00000592535 PRDM8Q9NQV8 689 aa13.7□□□□□ -0.22
APOC1-208ENST00000592535 TMEM9Q9P0T7 183 aa13.7□□□□□ -0.22
APOC1-208ENST00000592535 SLC23A2Q9UGH3 650 aa13.7□□□□□ -0.22
APOC1-208ENST00000592535 PCDHGA7Q9Y5G6 932 aa13.7□□□□□ -0.22
APOC1-208ENST00000592535 NBEAQ8NFP9 2946 aa13.7□□□□□ -0.22
APOC1-208ENST00000592535 GPR39O43194 453 aa13.69□□□□□ -0.22
APOC1-208ENST00000592535 VEGFDO43915 354 aa13.69□□□□□ -0.22
APOC1-208ENST00000592535 UGT1A9O60656 530 aa13.69□□□□□ -0.22
APOC1-208ENST00000592535 STK10O94804 968 aaKnown RBP13.69□□□□□ -0.22
APOC1-208ENST00000592535 CDK14O94921 469 aa13.69□□□□□ -0.22
APOC1-208ENST00000592535 SLC2A4P14672 509 aa13.69□□□□□ -0.22
APOC1-208ENST00000592535 ZNF7P17097 686 aaPredicted RBP13.69□□□□□ -0.22
APOC1-208ENST00000592535 UGT1A6P19224 532 aa13.69□□□□□ -0.22
APOC1-208ENST00000592535 UGT1A1P22309 533 aa13.69□□□□□ -0.22
APOC1-208ENST00000592535 UGT1A4P22310 534 aa13.69□□□□□ -0.22
APOC1-208ENST00000592535 MPSTP25325 297 aa13.69□□□□□ -0.22
APOC1-208ENST00000592535 CA5AP35218 305 aa13.69□□□□□ -0.22
APOC1-208ENST00000592535 UGT1A3P35503 534 aa13.69□□□□□ -0.22
APOC1-208ENST00000592535 SPAM1P38567 509 aa13.69□□□□□ -0.22
APOC1-208ENST00000592535 LIMK2P53671 638 aa13.69□□□□□ -0.22
APOC1-208ENST00000592535 MAPK10P53779 464 aa13.69□□□□□ -0.22
APOC1-208ENST00000592535 TMPRSS3P57727 454 aa13.69□□□□□ -0.22
APOC1-208ENST00000592535 CLN3Q13286 438 aa13.69□□□□□ -0.22
APOC1-208ENST00000592535 NFATC2Q13469 925 aa13.69□□□□□ -0.22
APOC1-208ENST00000592535 SQSTM1Q13501 440 aa13.69□□□□□ -0.22
APOC1-208ENST00000592535 PTPRCAPQ14761 206 aa13.69□□□□□ -0.22
APOC1-208ENST00000592535 CHRNA6Q15825 494 aa13.69□□□□□ -0.22
APOC1-208ENST00000592535 INSCQ1MX18 579 aa13.69□□□□□ -0.22
APOC1-208ENST00000592535 FAM151BQ6UXP7 276 aa13.69□□□□□ -0.22
APOC1-208ENST00000592535 GPR155Q7Z3F1 870 aa13.69□□□□□ -0.22
APOC1-208ENST00000592535 LRRTM4Q86VH4 590 aa13.69□□□□□ -0.22
APOC1-208ENST00000592535 ZNF547Q8IVP9 402 aa13.69□□□□□ -0.22
APOC1-208ENST00000592535 TXLNBQ8N3L3 684 aa13.69□□□□□ -0.22
APOC1-208ENST00000592535 UBL4BQ8N7F7 174 aa13.69□□□□□ -0.22
APOC1-208ENST00000592535 OR4D9Q8NGE8 314 aa13.69□□□□□ -0.22
APOC1-208ENST00000592535 GDAP1Q8TB36 358 aa13.69□□□□□ -0.22
APOC1-208ENST00000592535 SPATA13Q96N96 652 aa13.69□□□□□ -0.22
APOC1-208ENST00000592535 UGT1A7Q9HAW7 530 aa13.69□□□□□ -0.22
APOC1-208ENST00000592535 UGT1A10Q9HAW8 530 aa13.69□□□□□ -0.22
APOC1-208ENST00000592535 UGT1A8Q9HAW9 530 aa13.69□□□□□ -0.22
APOC1-208ENST00000592535 DNAJC16Q9Y2G8 782 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms