RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 SPIDRQ14159 915 aa9.96□□□□□ -0.82
BRCA1-227ENST00000591849 PTPRCAPQ14761 206 aa9.96□□□□□ -0.82
BRCA1-227ENST00000591849 POU6F1Q14863 301 aa9.96□□□□□ -0.82
BRCA1-227ENST00000591849 PLA2G4EQ3MJ16 856 aa9.96□□□□□ -0.82
BRCA1-227ENST00000591849 DRICH1Q6PGQ1 229 aaPredicted RBP9.96□□□□□ -0.82
BRCA1-227ENST00000591849 RBM44Q6ZP01 1051 aaKnown RBP9.96□□□□□ -0.82
BRCA1-227ENST00000591849 TAS2R42Q7RTR8 314 aa9.96□□□□□ -0.82
BRCA1-227ENST00000591849 ADGRG6Q86SQ4 1221 aa9.96□□□□□ -0.82
BRCA1-227ENST00000591849 PRUNE1Q86TP1 453 aa9.96□□□□□ -0.82
BRCA1-227ENST00000591849 LRRTM4Q86VH4 590 aa9.96□□□□□ -0.82
BRCA1-227ENST00000591849 NRROSQ86YC3 692 aa9.96□□□□□ -0.82
BRCA1-227ENST00000591849 TRAPPC5Q8IUR0 188 aa9.96□□□□□ -0.82
BRCA1-227ENST00000591849 KDF1Q8NAX2 398 aaPredicted RBP9.96□□□□□ -0.82
BRCA1-227ENST00000591849 GPR156Q8NFN8 814 aa9.96□□□□□ -0.82
BRCA1-227ENST00000591849 ZCCHC14Q8WYQ9 949 aaKnown RBP9.96□□□□□ -0.82
BRCA1-227ENST00000591849 MAGOHBQ96A72 148 aaKnown RBP9.96□□□□□ -0.82
BRCA1-227ENST00000591849 SCARF2Q96GP6 870 aaPredicted RBP9.96□□□□□ -0.82
BRCA1-227ENST00000591849 PDLIM2Q96JY6 352 aa9.96□□□□□ -0.82
BRCA1-227ENST00000591849 VPS35Q96QK1 796 aa9.96□□□□□ -0.82
BRCA1-227ENST00000591849 GFM1Q96RP9 751 aaKnown RBP9.96□□□□□ -0.82
BRCA1-227ENST00000591849 CCDC86Q9H6F5 360 aaKnown RBP9.96□□□□□ -0.82
BRCA1-227ENST00000591849 ARNT2Q9HBZ2 717 aa9.96□□□□□ -0.82
BRCA1-227ENST00000591849 KLC4Q9NSK0 619 aa9.96□□□□□ -0.82
BRCA1-227ENST00000591849 FKBPLQ9UIM3 349 aa9.96□□□□□ -0.82
BRCA1-227ENST00000591849 KCTD3Q9Y597 815 aa9.96□□□□□ -0.82
BRCA1-227ENST00000591849 DSPP15924 2871 aaKnown RBP9.96□□□□□ -0.82
BRCA1-227ENST00000591849 GOLGA6L10A0A0M3HER8 536 aa9.95□□□□□ -0.82
BRCA1-227ENST00000591849 PDZK1P1A8MUH7 402 aa9.95□□□□□ -0.82
BRCA1-227ENST00000591849 CFAP99D6REC4 459 aa9.95□□□□□ -0.82
BRCA1-227ENST00000591849 TMX2-CTNND1H3BSU7 103 aa9.95□□□□□ -0.82
BRCA1-227ENST00000591849 PGRMC1O00264 195 aaKnown RBP9.95□□□□□ -0.82
BRCA1-227ENST00000591849 NOBOXO60393 691 aa9.95□□□□□ -0.82
BRCA1-227ENST00000591849 DNAJC6O75061 913 aa9.95□□□□□ -0.82
BRCA1-227ENST00000591849 CSO75390 466 aaKnown RBP9.95□□□□□ -0.82
BRCA1-227ENST00000591849 SRP72O76094 671 aaKnown RBP9.95□□□□□ -0.82
BRCA1-227ENST00000591849 PRAMEF1O95521 474 aa9.95□□□□□ -0.82
BRCA1-227ENST00000591849 RPLP0P05388 317 aaKnown RBP9.95□□□□□ -0.82
BRCA1-227ENST00000591849 APRTP07741 180 aa9.95□□□□□ -0.82
BRCA1-227ENST00000591849 ZSCAN5DPP0CG00 497 aa9.95□□□□□ -0.82
BRCA1-227ENST00000591849 ZNF7P17097 686 aaPredicted RBP9.95□□□□□ -0.82
BRCA1-227ENST00000591849 IDSP22304 550 aa9.95□□□□□ -0.82
BRCA1-227ENST00000591849 RPL22P35268 128 aaKnown RBP9.95□□□□□ -0.82
BRCA1-227ENST00000591849 TERF1P54274 439 aa9.95□□□□□ -0.82
BRCA1-227ENST00000591849 CCL7P80098 99 aa9.95□□□□□ -0.82
BRCA1-227ENST00000591849 BASP1P80723 227 aaKnown RBP9.95□□□□□ -0.82
BRCA1-227ENST00000591849 CCDC173Q0VFZ6 552 aa9.95□□□□□ -0.82
BRCA1-227ENST00000591849 SKIDA1Q1XH10 827 aa9.95□□□□□ -0.82
BRCA1-227ENST00000591849 AMZ1Q400G9 498 aa9.95□□□□□ -0.82
BRCA1-227ENST00000591849 ZRANB3Q5FWF4 1079 aa9.95□□□□□ -0.82
BRCA1-227ENST00000591849 GPRC6AQ5T6X5 926 aa9.95□□□□□ -0.82
BRCA1-227ENST00000591849 KCTD11Q693B1 232 aa9.95□□□□□ -0.82
BRCA1-227ENST00000591849 DENND5AQ6IQ26 1287 aa9.95□□□□□ -0.82
BRCA1-227ENST00000591849 TMEM220Q6QAJ8 160 aa9.95□□□□□ -0.82
BRCA1-227ENST00000591849 SLC9B2Q86UD5 537 aa9.95□□□□□ -0.82
BRCA1-227ENST00000591849 CCNJLQ8IV13 435 aa9.95□□□□□ -0.82
BRCA1-227ENST00000591849 TRIM48Q8IWZ4 208 aa9.95□□□□□ -0.82
BRCA1-227ENST00000591849 CACTIN-AS1Q8N1I8 211 aa9.95□□□□□ -0.82
BRCA1-227ENST00000591849 ARL14Q8N4G2 192 aa9.95□□□□□ -0.82
BRCA1-227ENST00000591849 OR52K1Q8NGK4 314 aa9.95□□□□□ -0.82
BRCA1-227ENST00000591849 OR13C4Q8NGS5 318 aa9.95□□□□□ -0.82
BRCA1-227ENST00000591849 DTX3LQ8TDB6 740 aa9.95□□□□□ -0.82
BRCA1-227ENST00000591849 STYXQ8WUJ0 223 aa9.95□□□□□ -0.82
BRCA1-227ENST00000591849 ULK4Q96C45 1275 aa9.95□□□□□ -0.82
BRCA1-227ENST00000591849 NXPE2Q96DL1 559 aa9.95□□□□□ -0.82
BRCA1-227ENST00000591849 MS4A14Q96JA4 679 aa9.95□□□□□ -0.82
BRCA1-227ENST00000591849 OSBPL9Q96SU4 736 aa9.95□□□□□ -0.82
BRCA1-227ENST00000591849 SLC38A3Q99624 504 aa9.95□□□□□ -0.82
BRCA1-227ENST00000591849 AP1M1Q9BXS5 423 aa9.95□□□□□ -0.82
BRCA1-227ENST00000591849 LRRN3Q9H3W5 708 aa9.95□□□□□ -0.82
BRCA1-227ENST00000591849 FAM96AQ9H5X1 160 aa9.95□□□□□ -0.82
BRCA1-227ENST00000591849 PIH1D1Q9NWS0 290 aaKnown RBP9.95□□□□□ -0.82
BRCA1-227ENST00000591849 DNAJC16Q9Y2G8 782 aa9.95□□□□□ -0.82
BRCA1-227ENST00000591849 RNF215Q9Y6U7 377 aa9.95□□□□□ -0.82
BRCA1-227ENST00000591849 FASNP49327 2511 aaKnown RBP9.95□□□□□ -0.82
BRCA1-227ENST00000591849 PTPRBP23467 1997 aa9.94□□□□□ -0.82
BRCA1-227ENST00000591849 CCDC78A2IDD5 438 aa9.94□□□□□ -0.82
BRCA1-227ENST00000591849 OR5K4A6NMS3 321 aa9.94□□□□□ -0.82
BRCA1-227ENST00000591849 AP3B1O00203 1094 aa9.94□□□□□ -0.82
BRCA1-227ENST00000591849 NUDT21O43809 227 aaKnown RBP9.94□□□□□ -0.82
BRCA1-227ENST00000591849 TCEA3O75764 348 aa9.94□□□□□ -0.82
BRCA1-227ENST00000591849 PNLIPP16233 465 aa9.94□□□□□ -0.82
BRCA1-227ENST00000591849 TCP1P17987 556 aaKnown RBP9.94□□□□□ -0.82
BRCA1-227ENST00000591849 PBLDP30039 288 aaPredicted RBP9.94□□□□□ -0.82
BRCA1-227ENST00000591849 MC4RP32245 332 aa9.94□□□□□ -0.82
BRCA1-227ENST00000591849 VPS41P49754 854 aa9.94□□□□□ -0.82
BRCA1-227ENST00000591849 SARNPP82979 210 aaKnown RBP9.94□□□□□ -0.82
BRCA1-227ENST00000591849 CYP4F3Q08477 520 aa9.94□□□□□ -0.82
BRCA1-227ENST00000591849 HLTFQ14527 1009 aaKnown RBP eCLIP9.94□□□□□ -0.823e-6■■□□□ 13.4
BRCA1-227ENST00000591849 SIX1Q15475 284 aaPredicted RBP9.94□□□□□ -0.82
BRCA1-227ENST00000591849 TRIP13Q15645 432 aaPredicted RBP9.94□□□□□ -0.82
BRCA1-227ENST00000591849 CERCAMQ5T4B2 595 aa9.94□□□□□ -0.82
BRCA1-227ENST00000591849 FOXR1Q6PIV2 292 aa9.94□□□□□ -0.82
BRCA1-227ENST00000591849 DET1Q7L5Y6 550 aa9.94□□□□□ -0.82
BRCA1-227ENST00000591849 SFTPA2Q8IWL1 248 aa9.94□□□□□ -0.82
BRCA1-227ENST00000591849 DCBLD1Q8N8Z6 715 aa9.94□□□□□ -0.82
BRCA1-227ENST00000591849 PRELID2Q8N945 189 aa9.94□□□□□ -0.82
BRCA1-227ENST00000591849 HEXDCQ8WVB3 486 aa9.94□□□□□ -0.82
BRCA1-227ENST00000591849 GATA6Q92908 595 aa9.94□□□□□ -0.82
BRCA1-227ENST00000591849 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.94□□□□□ -0.82
BRCA1-227ENST00000591849 SH3KBP1Q96B97 665 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms