RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 STX2P32856 288 aa13.48□□□□□ -0.25
VMP1-210ENST00000589823 CA5AP35218 305 aa13.48□□□□□ -0.25
VMP1-210ENST00000589823 GPX6P59796 221 aa13.48□□□□□ -0.25
VMP1-210ENST00000589823 MGAT5Q09328 741 aa13.48□□□□□ -0.25
VMP1-210ENST00000589823 TMEM115Q12893 351 aaPredicted RBP13.48□□□□□ -0.25
VMP1-210ENST00000589823 NAA30Q147X3 362 aaPredicted RBP13.48□□□□□ -0.25
VMP1-210ENST00000589823 CCDC6Q16204 474 aa13.48□□□□□ -0.25
VMP1-210ENST00000589823 DBN1Q16643 649 aa13.48□□□□□ -0.25
VMP1-210ENST00000589823 PLA2G2CQ5R387 149 aa13.48□□□□□ -0.25
VMP1-210ENST00000589823 RNF187Q5TA31 235 aaPredicted RBP13.48□□□□□ -0.25
VMP1-210ENST00000589823 ZNF470Q6ECI4 717 aa13.48□□□□□ -0.25
VMP1-210ENST00000589823 TRMT10CQ7L0Y3 403 aaKnown RBP13.48□□□□□ -0.25
VMP1-210ENST00000589823 ADGRG6Q86SQ4 1221 aa13.48□□□□□ -0.25
VMP1-210ENST00000589823 PARGQ86W56 976 aa13.48□□□□□ -0.25
VMP1-210ENST00000589823 SPATS2Q86XZ4 545 aaKnown RBP13.48□□□□□ -0.25
VMP1-210ENST00000589823 UNC5BQ8IZJ1 945 aa13.48□□□□□ -0.25
VMP1-210ENST00000589823 RBFAQ8N0V3 343 aa13.48□□□□□ -0.25
VMP1-210ENST00000589823 OXR1Q8N573 874 aa13.48□□□□□ -0.25
VMP1-210ENST00000589823 CDKL2Q92772 493 aa13.48□□□□□ -0.25
VMP1-210ENST00000589823 TCF12Q99081 682 aa13.48□□□□□ -0.25
VMP1-210ENST00000589823 ZDHHC5Q9C0B5 715 aa13.48□□□□□ -0.25
VMP1-210ENST00000589823 OR2AG1Q9H205 316 aa13.48□□□□□ -0.25
VMP1-210ENST00000589823 MARCH4Q9P2E8 410 aaPredicted RBP13.48□□□□□ -0.25
VMP1-210ENST00000589823 RAB21Q9UL25 225 aa13.48□□□□□ -0.25
VMP1-210ENST00000589823 SLC17A4Q9Y2C5 497 aa13.48□□□□□ -0.25
VMP1-210ENST00000589823 PRSS38A1L453 326 aa13.47□□□□□ -0.25
VMP1-210ENST00000589823 PATE3B3GLJ2 98 aa13.47□□□□□ -0.25
VMP1-210ENST00000589823 GPR89AB7ZAQ6 455 aa13.47□□□□□ -0.25
VMP1-210ENST00000589823 PROB1E7EW31 1015 aa13.47□□□□□ -0.25
VMP1-210ENST00000589823 F8W8V4 182 aa13.47□□□□□ -0.25
VMP1-210ENST00000589823 TNFP01375 233 aa13.47□□□□□ -0.25
VMP1-210ENST00000589823 CEACAM5P06731 702 aa13.47□□□□□ -0.25
VMP1-210ENST00000589823 IVLP07476 585 aa13.47□□□□□ -0.25
VMP1-210ENST00000589823 GPR89BP0CG08 455 aa13.47□□□□□ -0.25
VMP1-210ENST00000589823 ZNF7P17097 686 aaPredicted RBP13.47□□□□□ -0.25
VMP1-210ENST00000589823 CTSKP43235 329 aa13.47□□□□□ -0.25
VMP1-210ENST00000589823 POLD2P49005 469 aa13.47□□□□□ -0.25
VMP1-210ENST00000589823 BLKP51451 505 aa13.47□□□□□ -0.25
VMP1-210ENST00000589823 PMS2P54278 862 aa13.47□□□□□ -0.25
VMP1-210ENST00000589823 SRP54P61011 504 aaKnown RBP13.47□□□□□ -0.25
VMP1-210ENST00000589823 PPARDQ03181 441 aa13.47□□□□□ -0.25
VMP1-210ENST00000589823 GRIK2Q13002 908 aa13.47□□□□□ -0.25
VMP1-210ENST00000589823 FZD2Q14332 565 aa13.47□□□□□ -0.25
VMP1-210ENST00000589823 SEMA3AQ14563 771 aa13.47□□□□□ -0.25
VMP1-210ENST00000589823 KIF19Q2TAC6 998 aa13.47□□□□□ -0.25
VMP1-210ENST00000589823 MAP9Q49MG5 647 aa13.47□□□□□ -0.25
VMP1-210ENST00000589823 TPRG1LQ5T0D9 272 aa13.47□□□□□ -0.25
VMP1-210ENST00000589823 ZNF648Q5T619 568 aaPredicted RBP13.47□□□□□ -0.25
VMP1-210ENST00000589823 ZNF449Q6P9G9 518 aa13.47□□□□□ -0.25
VMP1-210ENST00000589823 TRMT10BQ6PF06 316 aaKnown RBP13.47□□□□□ -0.25
VMP1-210ENST00000589823 IL27RAQ6UWB1 636 aa13.47□□□□□ -0.25
VMP1-210ENST00000589823 CYS1Q717R9 158 aa13.47□□□□□ -0.25
VMP1-210ENST00000589823 MARK2Q7KZI7 788 aaKnown RBP13.47□□□□□ -0.25
VMP1-210ENST00000589823 LDB1Q86U70 411 aaPredicted RBP13.47□□□□□ -0.25
VMP1-210ENST00000589823 CILP2Q8IUL8 1156 aa13.47□□□□□ -0.25
VMP1-210ENST00000589823 SCG3Q8WXD2 468 aaKnown RBP13.47□□□□□ -0.25
VMP1-210ENST00000589823 SMOC1Q9H4F8 434 aa13.47□□□□□ -0.25
VMP1-210ENST00000589823 RMI1Q9H9A7 625 aa13.47□□□□□ -0.25
VMP1-210ENST00000589823 CAPN10Q9HC96 672 aa13.47□□□□□ -0.25
VMP1-210ENST00000589823 FGF22Q9HCT0 170 aa13.47□□□□□ -0.25
VMP1-210ENST00000589823 INTS10Q9NVR2 710 aaKnown RBP13.47□□□□□ -0.25
VMP1-210ENST00000589823 NSMCE4AQ9NXX6 385 aa13.47□□□□□ -0.25
VMP1-210ENST00000589823 MOCS1Q9NZB8 636 aa13.47□□□□□ -0.25
VMP1-210ENST00000589823 ZFATQ9P243 1243 aa13.47□□□□□ -0.25
VMP1-210ENST00000589823 ATXN10Q9UBB4 475 aa13.47□□□□□ -0.25
VMP1-210ENST00000589823 VPS9D1Q9Y2B5 631 aa13.47□□□□□ -0.25
VMP1-210ENST00000589823 SNX11Q9Y5W9 270 aa13.47□□□□□ -0.25
VMP1-210ENST00000589823 DMDP11532 3685 aa13.47□□□□□ -0.25
VMP1-210ENST00000589823 GON4LQ3T8J9 2241 aa13.47□□□□□ -0.25
VMP1-210ENST00000589823 SDK1Q7Z5N4 2213 aa13.47□□□□□ -0.25
VMP1-210ENST00000589823 IGLV3-16A0A075B6K0 115 aa13.46□□□□□ -0.25
VMP1-210ENST00000589823 TCRBV9S1A1TA0A576 114 aa13.46□□□□□ -0.25
VMP1-210ENST00000589823 UBA6A0AVT1 1052 aaPredicted RBP13.46□□□□□ -0.25
VMP1-210ENST00000589823 H3BM21 787 aa13.46□□□□□ -0.25
VMP1-210ENST00000589823 ARHGAP33O14559 1287 aa13.46□□□□□ -0.25
VMP1-210ENST00000589823 DFNA5O60443 496 aa13.46□□□□□ -0.25
VMP1-210ENST00000589823 LRP3O75074 770 aa13.46□□□□□ -0.25
VMP1-210ENST00000589823 RASGRP1O95267 797 aa13.46□□□□□ -0.25
VMP1-210ENST00000589823 ACSL3O95573 720 aa13.46□□□□□ -0.25
VMP1-210ENST00000589823 ATP1B2P14415 290 aaPredicted RBP13.46□□□□□ -0.25
VMP1-210ENST00000589823 ZNF8P17098 575 aaPredicted RBP13.46□□□□□ -0.25
VMP1-210ENST00000589823 NSG1P42857 185 aa13.46□□□□□ -0.25
VMP1-210ENST00000589823 SLC1A2P43004 574 aa13.46□□□□□ -0.25
VMP1-210ENST00000589823 ATXN3P54252 364 aaPredicted RBP13.46□□□□□ -0.25
VMP1-210ENST00000589823 NHLH1Q02575 133 aa13.46□□□□□ -0.25
VMP1-210ENST00000589823 EIF2B5Q13144 721 aaKnown RBP13.46□□□□□ -0.25
VMP1-210ENST00000589823 CTBP1Q13363 440 aa13.46□□□□□ -0.25
VMP1-210ENST00000589823 TYSND1Q2T9J0 566 aa13.46□□□□□ -0.25
VMP1-210ENST00000589823 ALG11Q2TAA5 492 aa13.46□□□□□ -0.25
VMP1-210ENST00000589823 KHDC1Q4VXA5 237 aaKnown RBP13.46□□□□□ -0.25
VMP1-210ENST00000589823 TEDDM1Q5T9Z0 273 aa13.46□□□□□ -0.25
VMP1-210ENST00000589823 EMBQ6PCB8 327 aa13.46□□□□□ -0.25
VMP1-210ENST00000589823 PACS1Q6VY07 963 aa13.46□□□□□ -0.25
VMP1-210ENST00000589823 KIAA0408Q6ZU52 694 aa13.46□□□□□ -0.25
VMP1-210ENST00000589823 DET1Q7L5Y6 550 aa13.46□□□□□ -0.25
VMP1-210ENST00000589823 RD3Q7Z3Z2 195 aa13.46□□□□□ -0.25
VMP1-210ENST00000589823 GALNT13Q8IUC8 556 aa13.46□□□□□ -0.25
VMP1-210ENST00000589823 HID1Q8IV36 788 aa13.46□□□□□ -0.25
VMP1-210ENST00000589823 DENND6AQ8IWF6 608 aa13.46□□□□□ -0.25
VMP1-210ENST00000589823 CNTN4Q8IWV2 1026 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms