RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 PRPF19Q9UMS4 504 aaKnown RBP10.3□□□□□ -0.76
VPS25-203ENST00000589520 CCL26Q9Y258 94 aa10.3□□□□□ -0.76
VPS25-203ENST00000589520 SLC27A6Q9Y2P4 619 aa10.3□□□□□ -0.76
VPS25-203ENST00000589520 PRUNE2Q8WUY3 3088 aa10.29□□□□□ -0.76
VPS25-203ENST00000589520 SUPT3HB4E1H0 165 aa10.29□□□□□ -0.76
VPS25-203ENST00000589520 BTN3A1O00481 513 aa10.29□□□□□ -0.76
VPS25-203ENST00000589520 SDHDO14521 159 aa10.29□□□□□ -0.76
VPS25-203ENST00000589520 AZIN1O14977 448 aa10.29□□□□□ -0.76
VPS25-203ENST00000589520 UBDO15205 165 aa10.29□□□□□ -0.76
VPS25-203ENST00000589520 RAD51BO15315 384 aa10.29□□□□□ -0.76
VPS25-203ENST00000589520 HOXC11O43248 304 aaPredicted RBP10.29□□□□□ -0.76
VPS25-203ENST00000589520 SUPT3HO75486 399 aa10.29□□□□□ -0.76
VPS25-203ENST00000589520 ECI2O75521 394 aa10.29□□□□□ -0.76
VPS25-203ENST00000589520 NFATC1O95644 943 aa10.29□□□□□ -0.76
VPS25-203ENST00000589520 TSPAN12O95859 305 aa10.29□□□□□ -0.76
VPS25-203ENST00000589520 CHEK2O96017 543 aa10.29□□□□□ -0.76
VPS25-203ENST00000589520 RPS17P08708 135 aaKnown RBP10.29□□□□□ -0.76
VPS25-203ENST00000589520 ENO3P13929 434 aaPredicted RBP10.29□□□□□ -0.76
VPS25-203ENST00000589520 HNRNPLP14866 589 aaKnown RBP eCLIP10.29□□□□□ -0.76
VPS25-203ENST00000589520 PCSK2P16519 638 aa10.29□□□□□ -0.76
VPS25-203ENST00000589520 BPIP17213 487 aa10.29□□□□□ -0.76
VPS25-203ENST00000589520 PIK3R1P27986 724 aa10.29□□□□□ -0.76
VPS25-203ENST00000589520 EPHA3P29320 983 aa10.29□□□□□ -0.76
VPS25-203ENST00000589520 GCKP35557 465 aa10.29□□□□□ -0.76
VPS25-203ENST00000589520 CPOXP36551 454 aa10.29□□□□□ -0.76
VPS25-203ENST00000589520 ACADVLP49748 655 aa10.29□□□□□ -0.76
VPS25-203ENST00000589520 PGGT1BP53609 377 aa10.29□□□□□ -0.76
VPS25-203ENST00000589520 PKNOX1P55347 436 aa10.29□□□□□ -0.76
VPS25-203ENST00000589520 ST8SIA6P61647 398 aa10.29□□□□□ -0.76
VPS25-203ENST00000589520 CLCQ05315 142 aa10.29□□□□□ -0.76
VPS25-203ENST00000589520 BTKQ06187 659 aa10.29□□□□□ -0.76
VPS25-203ENST00000589520 ARHGEF7Q14155 803 aa10.29□□□□□ -0.76
VPS25-203ENST00000589520 E2F5Q15329 346 aa10.29□□□□□ -0.76
VPS25-203ENST00000589520 PCBP2Q15366 365 aaKnown RBP eCLIP10.29□□□□□ -0.764e-13■□□□□ 8.9
VPS25-203ENST00000589520 DHCR24Q15392 516 aa10.29□□□□□ -0.76
VPS25-203ENST00000589520 PDCD2Q16342 344 aaPredicted RBP10.29□□□□□ -0.76
VPS25-203ENST00000589520 SLC5A9Q2M3M2 681 aa10.29□□□□□ -0.76
VPS25-203ENST00000589520 SWT1Q5T5J6 900 aaKnown RBP10.29□□□□□ -0.76
VPS25-203ENST00000589520 WLSQ5T9L3 541 aa10.29□□□□□ -0.76
VPS25-203ENST00000589520 AAGABQ6PD74 315 aa10.29□□□□□ -0.76
VPS25-203ENST00000589520 DPY19L3Q6ZPD9 716 aa10.29□□□□□ -0.76
VPS25-203ENST00000589520 GRASPQ7Z6J2 395 aaPredicted RBP10.29□□□□□ -0.76
VPS25-203ENST00000589520 ULK2Q8IYT8 1036 aa10.29□□□□□ -0.76
VPS25-203ENST00000589520 MYO1HQ8N1T3 1032 aa10.29□□□□□ -0.76
VPS25-203ENST00000589520 PELI3Q8N2H9 469 aa10.29□□□□□ -0.76
VPS25-203ENST00000589520 NXPE1Q8N323 547 aa10.29□□□□□ -0.76
VPS25-203ENST00000589520 KYQ8NBH2 561 aa10.29□□□□□ -0.76
VPS25-203ENST00000589520 SMG7Q92540 1137 aaKnown RBP10.29□□□□□ -0.76
VPS25-203ENST00000589520 STMN2Q93045 179 aa10.29□□□□□ -0.76
VPS25-203ENST00000589520 PPP2R3CQ969Q6 453 aa10.29□□□□□ -0.76
VPS25-203ENST00000589520 FUBP1Q96AE4 644 aaKnown RBP10.29□□□□□ -0.76
VPS25-203ENST00000589520 FAM122AQ96E09 287 aa10.29□□□□□ -0.76
VPS25-203ENST00000589520 LINGO1Q96FE5 620 aa10.29□□□□□ -0.76
VPS25-203ENST00000589520 RPL10LQ96L21 214 aaKnown RBP10.29□□□□□ -0.76
VPS25-203ENST00000589520 LENG8Q96PV6 779 aaPredicted RBP10.29□□□□□ -0.76
VPS25-203ENST00000589520 TACO1Q9BSH4 297 aaKnown RBP10.29□□□□□ -0.76
VPS25-203ENST00000589520 THTPAQ9BU02 230 aa10.29□□□□□ -0.76
VPS25-203ENST00000589520 UNKQ9C0B0 810 aaKnown RBP10.29□□□□□ -0.76
VPS25-203ENST00000589520 SMG9Q9H0W8 520 aaKnown RBP10.29□□□□□ -0.76
VPS25-203ENST00000589520 TNKS2Q9H2K2 1166 aa10.29□□□□□ -0.76
VPS25-203ENST00000589520 LINC00597Q9H2U6 94 aa10.29□□□□□ -0.76
VPS25-203ENST00000589520 DENND2DQ9H6A0 471 aaPredicted RBP10.29□□□□□ -0.76
VPS25-203ENST00000589520 WDR55Q9H6Y2 383 aaPredicted RBP10.29□□□□□ -0.76
VPS25-203ENST00000589520 BRD9Q9H8M2 597 aa10.29□□□□□ -0.76
VPS25-203ENST00000589520 SFXN1Q9H9B4 322 aa10.29□□□□□ -0.76
VPS25-203ENST00000589520 RDH14Q9HBH5 336 aa10.29□□□□□ -0.76
VPS25-203ENST00000589520 DUS2Q9NX74 493 aaKnown RBP10.29□□□□□ -0.76
VPS25-203ENST00000589520 NFKBIL1Q9UBC1 381 aaPredicted RBP10.29□□□□□ -0.76
VPS25-203ENST00000589520 STOML1Q9UBI4 398 aa10.29□□□□□ -0.76
VPS25-203ENST00000589520 HCFC2Q9Y5Z7 792 aa10.29□□□□□ -0.76
VPS25-203ENST00000589520 LAMA2P24043 3122 aaKnown RBP10.29□□□□□ -0.76
VPS25-203ENST00000589520 TTC28Q96AY4 2481 aa10.29□□□□□ -0.76
VPS25-203ENST00000589520 DENND4CQ5VZ89 1909 aa10.29□□□□□ -0.76
VPS25-203ENST00000589520 OBSL1O75147 1896 aa10.28□□□□□ -0.76
VPS25-203ENST00000589520 CFAP99D6REC4 459 aa10.28□□□□□ -0.76
VPS25-203ENST00000589520 UBXN8O00124 270 aa10.28□□□□□ -0.76
VPS25-203ENST00000589520 OR1I1O60431 355 aa10.28□□□□□ -0.76
VPS25-203ENST00000589520 CCNT2O60583 730 aaKnown RBP10.28□□□□□ -0.76
VPS25-203ENST00000589520 PEX11AO75192 247 aa10.28□□□□□ -0.76
VPS25-203ENST00000589520 NIPSNAP2O75323 286 aa10.28□□□□□ -0.76
VPS25-203ENST00000589520 FKBP6O75344 327 aa10.28□□□□□ -0.76
VPS25-203ENST00000589520 CDK14O94921 469 aa10.28□□□□□ -0.76
VPS25-203ENST00000589520 AP2A2O94973 939 aa10.28□□□□□ -0.76
VPS25-203ENST00000589520 PRAMEF12O95522 483 aa10.28□□□□□ -0.76
VPS25-203ENST00000589520 ESRRBO95718 433 aa10.28□□□□□ -0.76
VPS25-203ENST00000589520 ENO2P09104 434 aaPredicted RBP10.28□□□□□ -0.76
VPS25-203ENST00000589520 OR56A5P0C7T3 313 aa10.28□□□□□ -0.76
VPS25-203ENST00000589520 PRSS56P0CW18 603 aa10.28□□□□□ -0.76
VPS25-203ENST00000589520 VIPR1P32241 457 aa10.28□□□□□ -0.76
VPS25-203ENST00000589520 IRS1P35568 1242 aa10.28□□□□□ -0.76
VPS25-203ENST00000589520 CTSOP43234 321 aaPredicted RBP10.28□□□□□ -0.76
VPS25-203ENST00000589520 CPA2P48052 419 aa10.28□□□□□ -0.76
VPS25-203ENST00000589520 MRPL19P49406 292 aaKnown RBP10.28□□□□□ -0.76
VPS25-203ENST00000589520 DGKGP49619 791 aa10.28□□□□□ -0.76
VPS25-203ENST00000589520 CDKN1CP49918 316 aaPredicted RBP10.28□□□□□ -0.76
VPS25-203ENST00000589520 DCDC1P59894 354 aa10.28□□□□□ -0.76
VPS25-203ENST00000589520 ACTR3P61158 418 aa10.28□□□□□ -0.76
VPS25-203ENST00000589520 PTSQ03393 145 aa10.28□□□□□ -0.76
VPS25-203ENST00000589520 TSNQ15631 228 aaKnown RBP10.28□□□□□ -0.76
VPS25-203ENST00000589520 CHRNA6Q15825 494 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms