RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	COL6A2	P12110	1019 aa		15.3	■□□□□ 0.04
DDX39A-209	ENST00000589318	KCNA4	P22459	653 aa		15.3	■□□□□ 0.04
DDX39A-209	ENST00000589318	MC4R	P32245	332 aa		15.3	■□□□□ 0.04
DDX39A-209	ENST00000589318	BST1	Q10588	318 aa		15.3	■□□□□ 0.04
DDX39A-209	ENST00000589318	PSAPL1	Q6NUJ1	521 aa		15.3	■□□□□ 0.04
DDX39A-209	ENST00000589318	RIPOR1	Q6ZS17	1223 aa		15.3	■□□□□ 0.04
DDX39A-209	ENST00000589318	RAB3IL1	Q8TBN0	382 aa		15.3	■□□□□ 0.04
DDX39A-209	ENST00000589318	E2F7	Q96AV8	911 aa		15.3	■□□□□ 0.04
DDX39A-209	ENST00000589318	MYADM	Q96S97	322 aa		15.3	■□□□□ 0.04
DDX39A-209	ENST00000589318	GPR63	Q9BZJ6	419 aa		15.3	■□□□□ 0.04
DDX39A-209	ENST00000589318	S1PR5	Q9H228	398 aa		15.3	■□□□□ 0.04
DDX39A-209	ENST00000589318		Q9H521	79 aa		15.3	■□□□□ 0.04
DDX39A-209	ENST00000589318	ZDHHC6	Q9H6R6	413 aa		15.3	■□□□□ 0.04
DDX39A-209	ENST00000589318	NMRAL1	Q9HBL8	299 aa		15.3	■□□□□ 0.04
DDX39A-209	ENST00000589318	DMTF1	Q9Y222	760 aa		15.3	■□□□□ 0.04
DDX39A-209	ENST00000589318	VWA7	Q9Y334	891 aa		15.3	■□□□□ 0.04
DDX39A-209	ENST00000589318	UNC80	Q8N2C7	3258 aa		15.3	■□□□□ 0.04
DDX39A-209	ENST00000589318		A0A0G2JND7	137 aa		15.29	■□□□□ 0.04
DDX39A-209	ENST00000589318	TARM1	B6A8C7	271 aa		15.29	■□□□□ 0.04
DDX39A-209	ENST00000589318	GAPDHS	O14556	408 aa	Predicted RBP	15.29	■□□□□ 0.04
DDX39A-209	ENST00000589318	SNN	O75324	88 aa	Predicted RBP	15.29	■□□□□ 0.04
DDX39A-209	ENST00000589318	DLD	P09622	509 aa	Known RBP	15.29	■□□□□ 0.04
DDX39A-209	ENST00000589318	ETS2	P15036	469 aa		15.29	■□□□□ 0.04
DDX39A-209	ENST00000589318	SLC6A11	P48066	632 aa		15.29	■□□□□ 0.04
DDX39A-209	ENST00000589318	DLX2	Q07687	328 aa	Predicted RBP	15.29	■□□□□ 0.04
DDX39A-209	ENST00000589318	FCHO2	Q0JRZ9	810 aa		15.29	■□□□□ 0.04
DDX39A-209	ENST00000589318	ZCCHC23	Q6ZST2	131 aa		15.29	■□□□□ 0.04
DDX39A-209	ENST00000589318	DHDDS	Q86SQ9	333 aa		15.29	■□□□□ 0.04
DDX39A-209	ENST00000589318	C10orf107	Q8IVU9	208 aa		15.29	■□□□□ 0.04
DDX39A-209	ENST00000589318	WFIKKN2	Q8TEU8	576 aa		15.29	■□□□□ 0.04
DDX39A-209	ENST00000589318	LPGAT1	Q92604	370 aa		15.29	■□□□□ 0.04
DDX39A-209	ENST00000589318	NXPE3	Q969Y0	559 aa		15.29	■□□□□ 0.04
DDX39A-209	ENST00000589318	C20orf27	Q9GZN8	174 aa		15.29	■□□□□ 0.04
DDX39A-209	ENST00000589318	INTS10	Q9NVR2	710 aa	Known RBP	15.29	■□□□□ 0.04
DDX39A-209	ENST00000589318	KCNK4	Q9NYG8	393 aa		15.29	■□□□□ 0.04
DDX39A-209	ENST00000589318	SORCS3	Q9UPU3	1222 aa		15.29	■□□□□ 0.04
DDX39A-209	ENST00000589318	TCF20	Q9UGU0	1960 aa	Known RBP	15.29	■□□□□ 0.04
DDX39A-209	ENST00000589318	C1orf232	A0A0U1RR37	186 aa		15.29	■□□□□ 0.04
DDX39A-209	ENST00000589318	NPIPB15	A6NHN6	443 aa	Predicted RBP	15.29	■□□□□ 0.04
DDX39A-209	ENST00000589318		B2RBV5	119 aa		15.29	■□□□□ 0.04
DDX39A-209	ENST00000589318	PRRT4	C9JH25	899 aa		15.29	■□□□□ 0.04
DDX39A-209	ENST00000589318	SPECC1L-ADORA2A	F8WAN1	911 aa		15.29	■□□□□ 0.04
DDX39A-209	ENST00000589318	GPR39	O43194	453 aa		15.29	■□□□□ 0.04
DDX39A-209	ENST00000589318	KLHL2	O95198	593 aa		15.29	■□□□□ 0.04
DDX39A-209	ENST00000589318	UGT2B4	P06133	528 aa		15.29	■□□□□ 0.04
DDX39A-209	ENST00000589318	HOXB8	P17481	243 aa	Predicted RBP	15.29	■□□□□ 0.04
DDX39A-209	ENST00000589318	CCDC92	Q53HC0	331 aa	Predicted RBP	15.29	■□□□□ 0.04
DDX39A-209	ENST00000589318	TMEM207	Q6UWW9	146 aa		15.29	■□□□□ 0.04
DDX39A-209	ENST00000589318	PHTF2	Q8N3S3	785 aa		15.29	■□□□□ 0.04
DDX39A-209	ENST00000589318	SPATA6L	Q8N4H0	392 aa		15.29	■□□□□ 0.04
DDX39A-209	ENST00000589318	RFWD2	Q8NHY2	731 aa		15.29	■□□□□ 0.04
DDX39A-209	ENST00000589318	NXNL1	Q96CM4	212 aa		15.29	■□□□□ 0.04
DDX39A-209	ENST00000589318	SCRN2	Q96FV2	425 aa		15.29	■□□□□ 0.04
DDX39A-209	ENST00000589318	UBXN10	Q96LJ8	280 aa		15.29	■□□□□ 0.04
DDX39A-209	ENST00000589318	ZNF641	Q96N77	438 aa	Predicted RBP	15.29	■□□□□ 0.04
DDX39A-209	ENST00000589318	MCCC1	Q96RQ3	725 aa	Predicted RBP	15.29	■□□□□ 0.04
DDX39A-209	ENST00000589318	C19orf43	Q9BQ61	176 aa		15.29	■□□□□ 0.04
DDX39A-209	ENST00000589318	TMEM120A	Q9BXJ8	343 aa		15.29	■□□□□ 0.04
DDX39A-209	ENST00000589318	MRPS26	Q9BYN8	205 aa	Known RBP	15.29	■□□□□ 0.04
DDX39A-209	ENST00000589318	PLA2G2F	Q9BZM2	168 aa		15.29	■□□□□ 0.04
DDX39A-209	ENST00000589318	CIPC	Q9C0C6	399 aa		15.29	■□□□□ 0.04
DDX39A-209	ENST00000589318	ZNF395	Q9H8N7	513 aa	Predicted RBP	15.29	■□□□□ 0.04
DDX39A-209	ENST00000589318	ZFYVE1	Q9HBF4	777 aa		15.29	■□□□□ 0.04
DDX39A-209	ENST00000589318	ZFP14	Q9HCL3	533 aa		15.29	■□□□□ 0.04
DDX39A-209	ENST00000589318	IGSF5	Q9NSI5	407 aa		15.29	■□□□□ 0.04
DDX39A-209	ENST00000589318	DCTN4	Q9UJW0	460 aa		15.29	■□□□□ 0.04
DDX39A-209	ENST00000589318	MED16	Q9Y2X0	877 aa		15.29	■□□□□ 0.04
DDX39A-209	ENST00000589318	PKP3	Q9Y446	797 aa		15.29	■□□□□ 0.04
DDX39A-209	ENST00000589318		A0A087X1B8	175 aa		15.28	■□□□□ 0.04
DDX39A-209	ENST00000589318	TK2	O00142	265 aa		15.28	■□□□□ 0.04
DDX39A-209	ENST00000589318	CLDN7	O95471	211 aa		15.28	■□□□□ 0.04
DDX39A-209	ENST00000589318	SRPRA	P08240	638 aa	Known RBP	15.28	■□□□□ 0.04
DDX39A-209	ENST00000589318	VCL	P18206	1134 aa		15.28	■□□□□ 0.04
DDX39A-209	ENST00000589318	FDXR	P22570	491 aa		15.28	■□□□□ 0.04
DDX39A-209	ENST00000589318	SUOX	P51687	545 aa		15.28	■□□□□ 0.04
DDX39A-209	ENST00000589318	OVGP1	Q12889	678 aa		15.28	■□□□□ 0.04
DDX39A-209	ENST00000589318	PDGFRL	Q15198	375 aa		15.28	■□□□□ 0.04
DDX39A-209	ENST00000589318	SLC44A4	Q53GD3	710 aa		15.28	■□□□□ 0.04
DDX39A-209	ENST00000589318	FAM45BP	Q6NSW5	357 aa		15.28	■□□□□ 0.04
DDX39A-209	ENST00000589318	ATG14	Q6ZNE5	492 aa		15.28	■□□□□ 0.04
DDX39A-209	ENST00000589318	TSPAN33	Q86UF1	283 aa		15.28	■□□□□ 0.04
DDX39A-209	ENST00000589318	PIM3	Q86V86	326 aa		15.28	■□□□□ 0.04
DDX39A-209	ENST00000589318	ULK2	Q8IYT8	1036 aa		15.28	■□□□□ 0.04
DDX39A-209	ENST00000589318	FSTL5	Q8N475	847 aa	Predicted RBP	15.28	■□□□□ 0.04
DDX39A-209	ENST00000589318	FAM45A	Q8TCE6	357 aa		15.28	■□□□□ 0.04
DDX39A-209	ENST00000589318	C7orf26	Q96N11	449 aa		15.28	■□□□□ 0.04
DDX39A-209	ENST00000589318	TCF12	Q99081	682 aa		15.28	■□□□□ 0.04
DDX39A-209	ENST00000589318	AARSD1	Q9BTE6	412 aa	Known RBP	15.28	■□□□□ 0.04
DDX39A-209	ENST00000589318	MTG2	Q9H4K7	406 aa		15.28	■□□□□ 0.04
DDX39A-209	ENST00000589318	S100A14	Q9HCY8	104 aa		15.28	■□□□□ 0.04
DDX39A-209	ENST00000589318	TAGLN3	Q9UI15	199 aa		15.28	■□□□□ 0.04
DDX39A-209	ENST00000589318	PLA2G4C	Q9UP65	541 aa		15.28	■□□□□ 0.04
DDX39A-209	ENST00000589318	RUVBL2	Q9Y230	463 aa	Known RBP	15.28	■□□□□ 0.04
DDX39A-209	ENST00000589318	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	15.27	■□□□□ 0.04
DDX39A-209	ENST00000589318	FCHO1	O14526	889 aa		15.27	■□□□□ 0.04
DDX39A-209	ENST00000589318	PML	P29590	882 aa		15.27	■□□□□ 0.04
DDX39A-209	ENST00000589318	GLRB	P48167	497 aa		15.27	■□□□□ 0.04
DDX39A-209	ENST00000589318	SLC12A2	P55011	1212 aa		15.27	■□□□□ 0.04
DDX39A-209	ENST00000589318	ILF2	Q12905	390 aa	Known RBP	15.27	■□□□□ 0.04
DDX39A-209	ENST00000589318	PDK3	Q15120	406 aa		15.27	■□□□□ 0.04

Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms