RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 SRPRAP08240 638 aaKnown RBP8.69□□□□□ -1.02
SMAD4-206ENST00000588860 C1SP09871 688 aa8.69□□□□□ -1.02
SMAD4-206ENST00000588860 CISD3P0C7P0 127 aa8.69□□□□□ -1.02
SMAD4-206ENST00000588860 TPBGLP0DKB5 382 aa8.69□□□□□ -1.02
SMAD4-206ENST00000588860 ESRRAP11474 423 aaPredicted RBP8.69□□□□□ -1.02
SMAD4-206ENST00000588860 CHRM3P20309 590 aa8.69□□□□□ -1.02
SMAD4-206ENST00000588860 PPARGP37231 505 aaPredicted RBP8.69□□□□□ -1.02
SMAD4-206ENST00000588860 NNMTP40261 264 aa8.69□□□□□ -1.02
SMAD4-206ENST00000588860 KCNC1P48547 511 aa8.69□□□□□ -1.02
SMAD4-206ENST00000588860 RASSF2P50749 326 aa8.69□□□□□ -1.02
SMAD4-206ENST00000588860 ATP6V0D1P61421 351 aa8.69□□□□□ -1.02
SMAD4-206ENST00000588860 FOXK2Q01167 660 aa8.69□□□□□ -1.02
SMAD4-206ENST00000588860 KDSRQ06136 332 aa8.69□□□□□ -1.02
SMAD4-206ENST00000588860 NFATC2Q13469 925 aa8.69□□□□□ -1.02
SMAD4-206ENST00000588860 UBAP2LQ14157 1087 aaKnown RBP8.69□□□□□ -1.02
SMAD4-206ENST00000588860 TBCCQ15814 346 aa8.69□□□□□ -1.02
SMAD4-206ENST00000588860 TTC31Q49AM3 519 aaPredicted RBP8.69□□□□□ -1.02
SMAD4-206ENST00000588860 SLC9B1Q4ZJI4 515 aa8.69□□□□□ -1.02
SMAD4-206ENST00000588860 SETMARQ53H47 684 aaPredicted RBP8.69□□□□□ -1.02
SMAD4-206ENST00000588860 PTRHD1Q6GMV3 140 aaKnown RBP8.69□□□□□ -1.02
SMAD4-206ENST00000588860 UGT3A1Q6NUS8 523 aa8.69□□□□□ -1.02
SMAD4-206ENST00000588860 EPGNQ6UW88 154 aa8.69□□□□□ -1.02
SMAD4-206ENST00000588860 SERPINA9Q86WD7 417 aa8.69□□□□□ -1.02
SMAD4-206ENST00000588860 C12orf40Q86WS4 652 aa8.69□□□□□ -1.02
SMAD4-206ENST00000588860 RBFAQ8N0V3 343 aa8.69□□□□□ -1.02
SMAD4-206ENST00000588860 AFAP1L2Q8N4X5 818 aa8.69□□□□□ -1.02
SMAD4-206ENST00000588860 NKAPQ8N5F7 415 aaKnown RBP8.69□□□□□ -1.02
SMAD4-206ENST00000588860 PTGR2Q8N8N7 351 aaPredicted RBP8.69□□□□□ -1.02
SMAD4-206ENST00000588860 ST13P5Q8NFI4 369 aaPredicted RBP8.69□□□□□ -1.02
SMAD4-206ENST00000588860 OR2A12Q8NGT7 310 aa8.69□□□□□ -1.02
SMAD4-206ENST00000588860 GIMAP7Q8NHV1 300 aa8.69□□□□□ -1.02
SMAD4-206ENST00000588860 MAPK15Q8TD08 544 aa8.69□□□□□ -1.02
SMAD4-206ENST00000588860 CD200R1Q8TD46 325 aa8.69□□□□□ -1.02
SMAD4-206ENST00000588860 FRS2Q8WU20 508 aa8.69□□□□□ -1.02
SMAD4-206ENST00000588860 FGF13Q92913 245 aa8.69□□□□□ -1.02
SMAD4-206ENST00000588860 KIAA1191Q96A73 305 aa8.69□□□□□ -1.02
SMAD4-206ENST00000588860 PBXIP1Q96AQ6 731 aa8.69□□□□□ -1.02
SMAD4-206ENST00000588860 VOPP1Q96AW1 172 aa8.69□□□□□ -1.02
SMAD4-206ENST00000588860 LINGO1Q96FE5 620 aa8.69□□□□□ -1.02
SMAD4-206ENST00000588860 SCRN2Q96FV2 425 aa8.69□□□□□ -1.02
SMAD4-206ENST00000588860 ZFYVE19Q96K21 471 aa8.69□□□□□ -1.02
SMAD4-206ENST00000588860 CNDP1Q96KN2 507 aa8.69□□□□□ -1.02
SMAD4-206ENST00000588860 PPP1R36Q96LQ0 422 aa8.69□□□□□ -1.02
SMAD4-206ENST00000588860 MCCC1Q96RQ3 725 aaPredicted RBP8.69□□□□□ -1.02
SMAD4-206ENST00000588860 LYSMD1Q96S90 227 aa8.69□□□□□ -1.02
SMAD4-206ENST00000588860 SLC30A3Q99726 388 aa8.69□□□□□ -1.02
SMAD4-206ENST00000588860 C19orf43Q9BQ61 176 aa8.69□□□□□ -1.02
SMAD4-206ENST00000588860 HEPHQ9BQS7 1158 aa8.69□□□□□ -1.02
SMAD4-206ENST00000588860 P2RY12Q9H244 342 aa8.69□□□□□ -1.02
SMAD4-206ENST00000588860 MTG2Q9H4K7 406 aa8.69□□□□□ -1.02
SMAD4-206ENST00000588860 EBF3Q9H4W6 596 aa8.69□□□□□ -1.02
SMAD4-206ENST00000588860 BRD9Q9H8M2 597 aa8.69□□□□□ -1.02
SMAD4-206ENST00000588860 COG4Q9H9E3 785 aa8.69□□□□□ -1.02
SMAD4-206ENST00000588860 EML4Q9HC35 981 aaKnown RBP8.69□□□□□ -1.02
SMAD4-206ENST00000588860 SARS2Q9NP81 518 aaKnown RBP8.69□□□□□ -1.02
SMAD4-206ENST00000588860 IL26Q9NPH9 171 aa8.69□□□□□ -1.02
SMAD4-206ENST00000588860 ARHGEF3Q9NR81 526 aa8.69□□□□□ -1.02
SMAD4-206ENST00000588860 B4GALT6Q9UBX8 382 aa8.69□□□□□ -1.02
SMAD4-206ENST00000588860 VTI1BQ9UEU0 232 aa8.69□□□□□ -1.02
SMAD4-206ENST00000588860 IL36AQ9UHA7 158 aa8.69□□□□□ -1.02
SMAD4-206ENST00000588860 ZDHHC2Q9UIJ5 367 aa8.69□□□□□ -1.02
SMAD4-206ENST00000588860 LNPEPQ9UIQ6 1025 aa8.69□□□□□ -1.02
SMAD4-206ENST00000588860 GNPTGQ9UJJ9 305 aa8.69□□□□□ -1.02
SMAD4-206ENST00000588860 FBXO10Q9UK96 956 aa8.69□□□□□ -1.02
SMAD4-206ENST00000588860 APPL1Q9UKG1 709 aa8.69□□□□□ -1.02
SMAD4-206ENST00000588860 RNF112Q9ULX5 631 aa8.69□□□□□ -1.02
SMAD4-206ENST00000588860 STK38LQ9Y2H1 464 aa8.69□□□□□ -1.02
SMAD4-206ENST00000588860 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.69□□□□□ -1.02
SMAD4-206ENST00000588860 MED16Q9Y2X0 877 aa8.69□□□□□ -1.02
SMAD4-206ENST00000588860 PPIL1Q9Y3C6 166 aa8.69□□□□□ -1.02
SMAD4-206ENST00000588860 PCDHB1Q9Y5F3 818 aa8.69□□□□□ -1.02
SMAD4-206ENST00000588860 ATG2BQ96BY7 2078 aa8.68□□□□□ -1.02
SMAD4-206ENST00000588860 GOLGA8QA0A0J9YX86 632 aa8.68□□□□□ -1.02
SMAD4-206ENST00000588860 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.68□□□□□ -1.02
SMAD4-206ENST00000588860 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.68□□□□□ -1.02
SMAD4-206ENST00000588860 GOLGA8OA6NCC3 632 aa8.68□□□□□ -1.02
SMAD4-206ENST00000588860 IQCF5A8MTL0 148 aa8.68□□□□□ -1.02
SMAD4-206ENST00000588860 CAPN14A8MX76 684 aa8.68□□□□□ -1.02
SMAD4-206ENST00000588860 PRR5-ARHGAP8B1AHC4 643 aa8.68□□□□□ -1.02
SMAD4-206ENST00000588860 GOLGA8NF8WBI6 632 aa8.68□□□□□ -1.02
SMAD4-206ENST00000588860 RFXAPO00287 272 aa8.68□□□□□ -1.02
SMAD4-206ENST00000588860 CDC7O00311 574 aa8.68□□□□□ -1.02
SMAD4-206ENST00000588860 MATN2O00339 956 aa8.68□□□□□ -1.02
SMAD4-206ENST00000588860 BTN3A1O00481 513 aa8.68□□□□□ -1.02
SMAD4-206ENST00000588860 HDAC3O15379 428 aa8.68□□□□□ -1.02
SMAD4-206ENST00000588860 GRID2O43424 1007 aa8.68□□□□□ -1.02
SMAD4-206ENST00000588860 TULP3O75386 442 aa8.68□□□□□ -1.02
SMAD4-206ENST00000588860 ECI2O75521 394 aa8.68□□□□□ -1.02
SMAD4-206ENST00000588860 LEFTY1O75610 366 aa8.68□□□□□ -1.02
SMAD4-206ENST00000588860 RASSF9O75901 435 aa8.68□□□□□ -1.02
SMAD4-206ENST00000588860 KRT16P08779 473 aa8.68□□□□□ -1.02
SMAD4-206ENST00000588860 CYP2A6P11509 494 aaPredicted RBP8.68□□□□□ -1.02
SMAD4-206ENST00000588860 GFAPP14136 432 aa8.68□□□□□ -1.02
SMAD4-206ENST00000588860 HNRNPLP14866 589 aaKnown RBP eCLIP8.68□□□□□ -1.025e-7■■□□□ 14.3
SMAD4-206ENST00000588860 ZNF7P17097 686 aaPredicted RBP8.68□□□□□ -1.02
SMAD4-206ENST00000588860 ITGB6P18564 788 aa8.68□□□□□ -1.02
SMAD4-206ENST00000588860 UGT1A6P19224 532 aa8.68□□□□□ -1.02
SMAD4-206ENST00000588860 NCF2P19878 526 aaPredicted RBP8.68□□□□□ -1.02
SMAD4-206ENST00000588860 IMPDH1P20839 514 aa8.68□□□□□ -1.02
SMAD4-206ENST00000588860 CD9P21926 228 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms