RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 KCTD5Q9NXV2 234 aa22.07■■□□□ 1.12
ATG4D-209ENST00000588857 TAS2R13Q9NYV9 303 aa22.07■■□□□ 1.12
ATG4D-209ENST00000588857 SLC17A7Q9P2U7 560 aa22.07■■□□□ 1.12
ATG4D-209ENST00000588857 FZD4Q9ULV1 537 aa22.07■■□□□ 1.12
ATG4D-209ENST00000588857 PLLPQ9Y342 182 aa22.07■■□□□ 1.12
ATG4D-209ENST00000588857 C7P10643 843 aa22.06■■□□□ 1.12
ATG4D-209ENST00000588857 COL6A2P12110 1019 aa22.06■■□□□ 1.12
ATG4D-209ENST00000588857 NDUFV2P19404 249 aa22.06■■□□□ 1.12
ATG4D-209ENST00000588857 RPS3P23396 243 aaKnown RBP eCLIP22.06■■□□□ 1.12
ATG4D-209ENST00000588857 AVPR2P30518 371 aa22.06■■□□□ 1.12
ATG4D-209ENST00000588857 DGKEP52429 567 aa22.06■■□□□ 1.12
ATG4D-209ENST00000588857 PGGT1BP53609 377 aa22.06■■□□□ 1.12
ATG4D-209ENST00000588857 PTRHD1Q6GMV3 140 aaKnown RBP22.06■■□□□ 1.12
ATG4D-209ENST00000588857 CDHR3Q6ZTQ4 885 aa22.06■■□□□ 1.12
ATG4D-209ENST00000588857 SYT13Q7L8C5 426 aa22.06■■□□□ 1.12
ATG4D-209ENST00000588857 TBC1D1Q86TI0 1168 aaPredicted RBP22.06■■□□□ 1.12
ATG4D-209ENST00000588857 LCA5Q86VQ0 697 aa22.06■■□□□ 1.12
ATG4D-209ENST00000588857 FAM131CQ96AQ9 280 aa22.06■■□□□ 1.12
ATG4D-209ENST00000588857 CENPTQ96BT3 561 aa22.06■■□□□ 1.12
ATG4D-209ENST00000588857 BOCQ9BWV1 1114 aa22.06■■□□□ 1.12
ATG4D-209ENST00000588857 POPDC3Q9HBV1 291 aa22.06■■□□□ 1.12
ATG4D-209ENST00000588857 GPAMQ9HCL2 828 aa22.06■■□□□ 1.12
ATG4D-209ENST00000588857 GNPTGQ9UJJ9 305 aa22.06■■□□□ 1.12
ATG4D-209ENST00000588857 IGLON5A6NGN9 336 aa22.05■■□□□ 1.12
ATG4D-209ENST00000588857 PLRG1O43660 514 aaKnown RBP22.05■■□□□ 1.12
ATG4D-209ENST00000588857 VPS26AO75436 327 aa22.05■■□□□ 1.12
ATG4D-209ENST00000588857 TM7SF2O76062 418 aa22.05■■□□□ 1.12
ATG4D-209ENST00000588857 NSG1P42857 185 aa22.05■■□□□ 1.12
ATG4D-209ENST00000588857 IRF9Q00978 393 aa22.05■■□□□ 1.12
ATG4D-209ENST00000588857 PDAP1Q13442 181 aaKnown RBP22.05■■□□□ 1.12
ATG4D-209ENST00000588857 GPRC6AQ5T6X5 926 aa22.05■■□□□ 1.12
ATG4D-209ENST00000588857 LVRNQ6Q4G3 990 aa22.05■■□□□ 1.12
ATG4D-209ENST00000588857 HMGB4Q8WW32 186 aa22.05■■□□□ 1.12
ATG4D-209ENST00000588857 FAM111AQ96PZ2 611 aa22.05■■□□□ 1.12
ATG4D-209ENST00000588857 FOXQ1Q9C009 403 aa22.05■■□□□ 1.12
ATG4D-209ENST00000588857 C12orf65Q9H3J6 166 aaKnown RBP22.05■■□□□ 1.12
ATG4D-209ENST00000588857 ZDBF2Q9HCK1 2354 aa22.05■■□□□ 1.12
ATG4D-209ENST00000588857 E5RI56 91 aa22.04■■□□□ 1.12
ATG4D-209ENST00000588857 H3BMM5 538 aa22.04■■□□□ 1.12
ATG4D-209ENST00000588857 STK25O00506 426 aa22.04■■□□□ 1.12
ATG4D-209ENST00000588857 TOP3BO95985 862 aaKnown RBP22.04■■□□□ 1.12
ATG4D-209ENST00000588857 PYGLP06737 847 aa22.04■■□□□ 1.12
ATG4D-209ENST00000588857 GABRG2P18507 467 aa22.04■■□□□ 1.12
ATG4D-209ENST00000588857 CHRM3P20309 590 aa22.04■■□□□ 1.12
ATG4D-209ENST00000588857 AKT1P31749 480 aa22.04■■□□□ 1.12
ATG4D-209ENST00000588857 WDR4P57081 412 aaKnown RBP22.04■■□□□ 1.12
ATG4D-209ENST00000588857 RPS21P63220 83 aaKnown RBP22.04■■□□□ 1.12
ATG4D-209ENST00000588857 IL9RQ01113 521 aa22.04■■□□□ 1.12
ATG4D-209ENST00000588857 DPTQ07507 201 aa22.04■■□□□ 1.12
ATG4D-209ENST00000588857 CTSL3PQ5NE16 218 aa22.04■■□□□ 1.12
ATG4D-209ENST00000588857 KYAT3Q6YP21 454 aaKnown RBP22.04■■□□□ 1.12
ATG4D-209ENST00000588857 CLEC14AQ86T13 490 aa22.04■■□□□ 1.12
ATG4D-209ENST00000588857 BTN2A2Q8WVV5 523 aa22.04■■□□□ 1.12
ATG4D-209ENST00000588857 DCUN1D1Q96GG9 259 aa22.04■■□□□ 1.12
ATG4D-209ENST00000588857 VPS35Q96QK1 796 aa22.04■■□□□ 1.12
ATG4D-209ENST00000588857 CAMSAP3Q9P1Y5 1249 aaPredicted RBP22.04■■□□□ 1.12
ATG4D-209ENST00000588857 NUMA1Q14980 2115 aa22.04■■□□□ 1.12
ATG4D-209ENST00000588857 DOCK9Q9BZ29 2069 aa22.04■■□□□ 1.12
ATG4D-209ENST00000588857 FADS2P1A8MWK0 482 aa22.04■■□□□ 1.12
ATG4D-209ENST00000588857 CFAP99D6REC4 459 aa22.04■■□□□ 1.12
ATG4D-209ENST00000588857 RALBP11234 206 aa22.04■■□□□ 1.12
ATG4D-209ENST00000588857 GMPRP36959 345 aa22.04■■□□□ 1.12
ATG4D-209ENST00000588857 ADPRHP54922 357 aa22.04■■□□□ 1.12
ATG4D-209ENST00000588857 GNGT1P63211 74 aa22.04■■□□□ 1.12
ATG4D-209ENST00000588857 LDLRAP1Q5SW96 308 aa22.04■■□□□ 1.12
ATG4D-209ENST00000588857 N4BP2L1Q5TBK1 243 aaPredicted RBP22.04■■□□□ 1.12
ATG4D-209ENST00000588857 KIAA1161Q6NSJ0 714 aa22.04■■□□□ 1.12
ATG4D-209ENST00000588857 UGT3A1Q6NUS8 523 aa22.04■■□□□ 1.12
ATG4D-209ENST00000588857 FAM124AQ86V42 546 aa22.04■■□□□ 1.12
ATG4D-209ENST00000588857 PIM3Q86V86 326 aa22.04■■□□□ 1.12
ATG4D-209ENST00000588857 NLRP8Q86W28 1048 aa22.04■■□□□ 1.12
ATG4D-209ENST00000588857 PLD6Q8N2A8 252 aaKnown RBP22.04■■□□□ 1.12
ATG4D-209ENST00000588857 PGBD3Q8N328 593 aa22.04■■□□□ 1.12
ATG4D-209ENST00000588857 CLDN19Q8N6F1 224 aa22.04■■□□□ 1.12
ATG4D-209ENST00000588857 HEXDCQ8WVB3 486 aa22.04■■□□□ 1.12
ATG4D-209ENST00000588857 KCNJ9Q92806 393 aa22.04■■□□□ 1.12
ATG4D-209ENST00000588857 FAM136AQ96C01 138 aa22.04■■□□□ 1.12
ATG4D-209ENST00000588857 PREBQ9HCU5 417 aa22.04■■□□□ 1.12
ATG4D-209ENST00000588857 TMPRSS11EQ9UL52 423 aa22.04■■□□□ 1.12
ATG4D-209ENST00000588857 IGLV3-16A0A075B6K0 115 aa22.03■■□□□ 1.12
ATG4D-209ENST00000588857 TBC1D3DA0A087WVF3 549 aa22.03■■□□□ 1.12
ATG4D-209ENST00000588857 TBC1D3IA0A087WXS9 549 aa22.03■■□□□ 1.12
ATG4D-209ENST00000588857 TBC1D3EA0A087X179 549 aa22.03■■□□□ 1.12
ATG4D-209ENST00000588857 TBC1D3KA0A087X1G2 549 aa22.03■■□□□ 1.12
ATG4D-209ENST00000588857 TBC1D3FA6NER0 549 aaPredicted RBP22.03■■□□□ 1.12
ATG4D-209ENST00000588857 PRR23AA6NEV1 266 aa22.03■■□□□ 1.12
ATG4D-209ENST00000588857 TBC1D3LB9A6J9 549 aa22.03■■□□□ 1.12
ATG4D-209ENST00000588857 DNAJC6O75061 913 aa22.03■■□□□ 1.12
ATG4D-209ENST00000588857 NIPSNAP2O75323 286 aa22.03■■□□□ 1.12
ATG4D-209ENST00000588857 ASMTLO95671 621 aa22.03■■□□□ 1.12
ATG4D-209ENST00000588857 TBC1D3HP0C7X1 549 aa22.03■■□□□ 1.12
ATG4D-209ENST00000588857 CD9P21926 228 aa22.03■■□□□ 1.12
ATG4D-209ENST00000588857 SLC26A3P40879 764 aa22.03■■□□□ 1.12
ATG4D-209ENST00000588857 SKIV2L2P42285 1042 aaKnown RBP22.03■■□□□ 1.12
ATG4D-209ENST00000588857 GPR1P46091 355 aa22.03■■□□□ 1.12
ATG4D-209ENST00000588857 SGCGQ13326 291 aa22.03■■□□□ 1.12
ATG4D-209ENST00000588857 FZD5Q13467 585 aa22.03■■□□□ 1.12
ATG4D-209ENST00000588857 TBC1D3GQ6DHY5 549 aa22.03■■□□□ 1.12
ATG4D-209ENST00000588857 RAET1GQ6H3X3 334 aa22.03■■□□□ 1.12
ATG4D-209ENST00000588857 TBC1D3CQ6IPX1 549 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms