RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 LDLRAP1Q5SW96 308 aa18.78■□□□□ 0.6
CLPTM1-209ENST00000588855 TAS2R42Q7RTR8 314 aa18.78■□□□□ 0.6
CLPTM1-209ENST00000588855 ANKMY2Q8IV38 441 aa18.78■□□□□ 0.6
CLPTM1-209ENST00000588855 NXPE1Q8N323 547 aa18.78■□□□□ 0.6
CLPTM1-209ENST00000588855 OR4L1Q8NH43 312 aa18.78■□□□□ 0.6
CLPTM1-209ENST00000588855 ULK4Q96C45 1275 aa18.78■□□□□ 0.6
CLPTM1-209ENST00000588855 LRRC39Q96DD0 335 aa18.78■□□□□ 0.6
CLPTM1-209ENST00000588855 CCDC97Q96F63 343 aaPredicted RBP18.78■□□□□ 0.6
CLPTM1-209ENST00000588855 TRIM39Q9HCM9 518 aa18.78■□□□□ 0.6
CLPTM1-209ENST00000588855 TMEM9BQ9NQ34 198 aa18.78■□□□□ 0.6
CLPTM1-209ENST00000588855 IL1RAPL1Q9NZN1 696 aa18.78■□□□□ 0.6
CLPTM1-209ENST00000588855 VPS18Q9P253 973 aa18.78■□□□□ 0.6
CLPTM1-209ENST00000588855 APOBEC3BQ9UH17 382 aaKnown RBP18.78■□□□□ 0.6
CLPTM1-209ENST00000588855 SUFUQ9UMX1 484 aa18.78■□□□□ 0.6
CLPTM1-209ENST00000588855 PCYT1BQ9Y5K3 369 aaPredicted RBP18.78■□□□□ 0.6
CLPTM1-209ENST00000588855 PTPRZ1P23471 2315 aaPredicted RBP18.77■□□□□ 0.6
CLPTM1-209ENST00000588855 RASGRP1O95267 797 aa18.77■□□□□ 0.6
CLPTM1-209ENST00000588855 VAPBO95292 243 aa18.77■□□□□ 0.6
CLPTM1-209ENST00000588855 IVLP07476 585 aa18.77■□□□□ 0.6
CLPTM1-209ENST00000588855 ZNF8P17098 575 aaPredicted RBP18.77■□□□□ 0.6
CLPTM1-209ENST00000588855 EPHA8P29322 1005 aaPredicted RBP18.77■□□□□ 0.6
CLPTM1-209ENST00000588855 AKT1P31749 480 aa18.77■□□□□ 0.6
CLPTM1-209ENST00000588855 ARCN1P48444 511 aaKnown RBP18.77■□□□□ 0.6
CLPTM1-209ENST00000588855 HK3P52790 923 aa18.77■□□□□ 0.6
CLPTM1-209ENST00000588855 BNIP3Q12983 259 aa18.77■□□□□ 0.6
CLPTM1-209ENST00000588855 CBLBQ13191 982 aa18.77■□□□□ 0.6
CLPTM1-209ENST00000588855 CRYMQ14894 314 aa18.77■□□□□ 0.6
CLPTM1-209ENST00000588855 CENPUQ71F23 418 aa18.77■□□□□ 0.6
CLPTM1-209ENST00000588855 SERPINA9Q86WD7 417 aa18.77■□□□□ 0.6
CLPTM1-209ENST00000588855 ZBED8Q8IZ13 594 aa18.77■□□□□ 0.6
CLPTM1-209ENST00000588855 IFT81Q8WYA0 676 aa18.77■□□□□ 0.6
CLPTM1-209ENST00000588855 CFAP36Q96G28 342 aa18.77■□□□□ 0.6
CLPTM1-209ENST00000588855 CARS2Q9HA77 564 aaKnown RBP18.77■□□□□ 0.6
CLPTM1-209ENST00000588855 SAYSD1Q9NPB0 183 aa18.77■□□□□ 0.6
CLPTM1-209ENST00000588855 TM7SF3Q9NS93 570 aa18.77■□□□□ 0.6
CLPTM1-209ENST00000588855 DNAAF2Q9NVR5 837 aaKnown RBP18.77■□□□□ 0.6
CLPTM1-209ENST00000588855 MARCH4Q9P2E8 410 aaPredicted RBP18.77■□□□□ 0.6
CLPTM1-209ENST00000588855 DGKBQ9Y6T7 804 aa18.77■□□□□ 0.6
CLPTM1-209ENST00000588855 ZFC3H1O60293 1989 aaKnown RBP18.77■□□□□ 0.59
CLPTM1-209ENST00000588855 ASCC3Q8N3C0 2202 aaKnown RBP18.77■□□□□ 0.59
CLPTM1-209ENST00000588855 GOLGA8KD6RF30 607 aa18.76■□□□□ 0.59
CLPTM1-209ENST00000588855 GOLGA8TH3BQL2 631 aa18.76■□□□□ 0.59
CLPTM1-209ENST00000588855 DFNA5O60443 496 aa18.76■□□□□ 0.59
CLPTM1-209ENST00000588855 DNAJC6O75061 913 aa18.76■□□□□ 0.59
CLPTM1-209ENST00000588855 SLU7O95391 586 aaKnown RBP18.76■□□□□ 0.59
CLPTM1-209ENST00000588855 POLBP06746 335 aa18.76■□□□□ 0.59
CLPTM1-209ENST00000588855 PAMP19021 973 aa18.76■□□□□ 0.59
CLPTM1-209ENST00000588855 ACRV1P26436 265 aa18.76■□□□□ 0.59
CLPTM1-209ENST00000588855 ECHS1P30084 290 aa18.76■□□□□ 0.59
CLPTM1-209ENST00000588855 GNPDA1P46926 289 aa18.76■□□□□ 0.59
CLPTM1-209ENST00000588855 CARSP49589 748 aaKnown RBP18.76■□□□□ 0.59
CLPTM1-209ENST00000588855 HNRNPKP61978 463 aaKnown RBP eCLIP18.76■□□□□ 0.591e-18■■■■□ 21.2
CLPTM1-209ENST00000588855 TMEM115Q12893 351 aaPredicted RBP18.76■□□□□ 0.59
CLPTM1-209ENST00000588855 SEMA3AQ14563 771 aa18.76■□□□□ 0.59
CLPTM1-209ENST00000588855 TCEA2Q15560 299 aa18.76■□□□□ 0.59
CLPTM1-209ENST00000588855 DBN1Q16643 649 aa18.76■□□□□ 0.59
CLPTM1-209ENST00000588855 CCDC25Q86WR0 208 aa18.76■□□□□ 0.59
CLPTM1-209ENST00000588855 FBXO36Q8NEA4 188 aa18.76■□□□□ 0.59
CLPTM1-209ENST00000588855 PIEZO1Q92508 2521 aa18.76■□□□□ 0.59
CLPTM1-209ENST00000588855 SCARF2Q96GP6 870 aaPredicted RBP18.76■□□□□ 0.59
CLPTM1-209ENST00000588855 SGSM3Q96HU1 749 aa18.76■□□□□ 0.59
CLPTM1-209ENST00000588855 NAT9Q9BTE0 207 aa18.76■□□□□ 0.59
CLPTM1-209ENST00000588855 LRRC61Q9BV99 259 aa18.76■□□□□ 0.59
CLPTM1-209ENST00000588855 PLAC1Q9HBJ0 212 aa18.76■□□□□ 0.59
CLPTM1-209ENST00000588855 CATSPERZQ9NTU4 200 aa18.76■□□□□ 0.59
CLPTM1-209ENST00000588855 ZC3H7BQ9UGR2 993 aaKnown RBP18.76■□□□□ 0.59
CLPTM1-209ENST00000588855 C4orf47A7E2U8 309 aa18.75■□□□□ 0.59
CLPTM1-209ENST00000588855 H3BM21 787 aa18.75■□□□□ 0.59
CLPTM1-209ENST00000588855 EIF3HO15372 352 aaKnown RBP eCLIP18.75■□□□□ 0.59
CLPTM1-209ENST00000588855 PIAS2O75928 621 aa18.75■□□□□ 0.59
CLPTM1-209ENST00000588855 TNFP01375 233 aa18.75■□□□□ 0.59
CLPTM1-209ENST00000588855 BLKP51451 505 aa18.75■□□□□ 0.59
CLPTM1-209ENST00000588855 B4GALNT1Q00973 533 aa18.75■□□□□ 0.59
CLPTM1-209ENST00000588855 HLTFQ14527 1009 aaKnown RBP eCLIP18.75■□□□□ 0.59
CLPTM1-209ENST00000588855 FASTKD1Q53R41 847 aaKnown RBP18.75■□□□□ 0.59
CLPTM1-209ENST00000588855 UNC5AQ6ZN44 842 aa18.75■□□□□ 0.59
CLPTM1-209ENST00000588855 GATAD2AQ86YP4 633 aa18.75■□□□□ 0.59
CLPTM1-209ENST00000588855 UNC5BQ8IZJ1 945 aa18.75■□□□□ 0.59
CLPTM1-209ENST00000588855 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.75■□□□□ 0.59
CLPTM1-209ENST00000588855 ZNF548Q8NEK5 533 aaPredicted RBP18.75■□□□□ 0.59
CLPTM1-209ENST00000588855 NAT14Q8WUY8 206 aa18.75■□□□□ 0.59
CLPTM1-209ENST00000588855 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.75■□□□□ 0.59
CLPTM1-209ENST00000588855 COPS8Q99627 209 aa18.75■□□□□ 0.59
CLPTM1-209ENST00000588855 BOCQ9BWV1 1114 aa18.75■□□□□ 0.59
CLPTM1-209ENST00000588855 SLC13A1Q9BZW2 595 aa18.75■□□□□ 0.59
CLPTM1-209ENST00000588855 ZCCHC2Q9C0B9 1178 aaKnown RBP18.75■□□□□ 0.59
CLPTM1-209ENST00000588855 UCKL1Q9NWZ5 548 aa18.75■□□□□ 0.59
CLPTM1-209ENST00000588855 ZDHHC3Q9NYG2 299 aa18.75■□□□□ 0.59
CLPTM1-209ENST00000588855 PRKAB1Q9Y478 270 aa18.75■□□□□ 0.59
CLPTM1-209ENST00000588855 FAM169AQ9Y6X4 670 aa18.75■□□□□ 0.59
CLPTM1-209ENST00000588855 PIKFYVEQ9Y2I7 2098 aa18.75■□□□□ 0.59
CLPTM1-209ENST00000588855 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.74■□□□□ 0.59
CLPTM1-209ENST00000588855 CD3EAPO15446 510 aaKnown RBP18.74■□□□□ 0.59
CLPTM1-209ENST00000588855 YKT6O15498 198 aa18.74■□□□□ 0.59
CLPTM1-209ENST00000588855 VEGFDO43915 354 aa18.74■□□□□ 0.59
CLPTM1-209ENST00000588855 NUAK1O60285 661 aa18.74■□□□□ 0.59
CLPTM1-209ENST00000588855 CDK14O94921 469 aa18.74■□□□□ 0.59
CLPTM1-209ENST00000588855 TTC4O95801 387 aa18.74■□□□□ 0.59
CLPTM1-209ENST00000588855 CELA2BP08218 269 aaPredicted RBP18.74■□□□□ 0.59
CLPTM1-209ENST00000588855 ZNF883P0CG24 379 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms