RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 NDRG2Q9UN36 371 aaKnown RBP25.79■■□□□ 1.72
SCAMP4-210ENST00000588555 BPGMP07738 259 aa25.78■■□□□ 1.72
SCAMP4-210ENST00000588555 CCDC166P0CW27 439 aa25.78■■□□□ 1.72
SCAMP4-210ENST00000588555 TSNAXIP1Q2TAA8 658 aa25.78■■□□□ 1.72
SCAMP4-210ENST00000588555 ZNF284Q2VY69 593 aa25.78■■□□□ 1.72
SCAMP4-210ENST00000588555 TMEM92Q6UXU6 159 aa25.78■■□□□ 1.72
SCAMP4-210ENST00000588555 CXorf40AQ8TE69 158 aa25.78■■□□□ 1.72
SCAMP4-210ENST00000588555 NAT14Q8WUY8 206 aa25.78■■□□□ 1.72
SCAMP4-210ENST00000588555 CHMP6Q96FZ7 201 aa25.78■■□□□ 1.72
SCAMP4-210ENST00000588555 SLC30A3Q99726 388 aa25.78■■□□□ 1.72
SCAMP4-210ENST00000588555 SIRPGQ9P1W8 387 aa25.78■■□□□ 1.72
SCAMP4-210ENST00000588555 MMP17Q9ULZ9 603 aa25.78■■□□□ 1.72
SCAMP4-210ENST00000588555 TCP11X1B4DZS4 312 aa25.77■■□□□ 1.72
SCAMP4-210ENST00000588555 TSPAN6O43657 245 aa25.77■■□□□ 1.72
SCAMP4-210ENST00000588555 RNASEH2AO75792 299 aaKnown RBP25.77■■□□□ 1.72
SCAMP4-210ENST00000588555 SBK3P0C264 359 aa25.77■■□□□ 1.72
SCAMP4-210ENST00000588555 NSG1P42857 185 aa25.77■■□□□ 1.72
SCAMP4-210ENST00000588555 PDAP1Q13442 181 aaKnown RBP25.77■■□□□ 1.72
SCAMP4-210ENST00000588555 CSHL1Q14406 222 aa25.77■■□□□ 1.72
SCAMP4-210ENST00000588555 EOGTQ5NDL2 527 aa25.77■■□□□ 1.72
SCAMP4-210ENST00000588555 ZNF852Q6ZMS4 543 aa25.77■■□□□ 1.72
SCAMP4-210ENST00000588555 FSTL5Q8N475 847 aaPredicted RBP25.77■■□□□ 1.72
SCAMP4-210ENST00000588555 GIMAP7Q8NHV1 300 aa25.77■■□□□ 1.72
SCAMP4-210ENST00000588555 ZNF75CPQ92670 426 aaPredicted RBP25.77■■□□□ 1.72
SCAMP4-210ENST00000588555 TSNARE1Q96NA8 513 aa25.77■■□□□ 1.72
SCAMP4-210ENST00000588555 VPS35Q96QK1 796 aa25.77■■□□□ 1.72
SCAMP4-210ENST00000588555 GNPTGQ9UJJ9 305 aa25.77■■□□□ 1.72
SCAMP4-210ENST00000588555 CA14Q9ULX7 337 aa25.77■■□□□ 1.72
SCAMP4-210ENST00000588555 SORCS3Q9UPU3 1222 aa25.77■■□□□ 1.72
SCAMP4-210ENST00000588555 TARM1B6A8C7 271 aa25.77■■□□□ 1.72
SCAMP4-210ENST00000588555 BIRC5O15392 142 aa25.77■■□□□ 1.72
SCAMP4-210ENST00000588555 VPS26AO75436 327 aa25.77■■□□□ 1.72
SCAMP4-210ENST00000588555 SOD1P00441 154 aa25.77■■□□□ 1.72
SCAMP4-210ENST00000588555 DNTTP04053 509 aa25.77■■□□□ 1.72
SCAMP4-210ENST00000588555 LTA4HP09960 611 aaKnown RBP25.77■■□□□ 1.72
SCAMP4-210ENST00000588555 GLRBP48167 497 aa25.77■■□□□ 1.72
SCAMP4-210ENST00000588555 PCLAFQ15004 111 aa25.77■■□□□ 1.72
SCAMP4-210ENST00000588555 FAM83EQ2M2I3 478 aa25.77■■□□□ 1.72
SCAMP4-210ENST00000588555 LRRC8EQ6NSJ5 796 aa25.77■■□□□ 1.72
SCAMP4-210ENST00000588555 PAQR3Q6TCH7 311 aa25.77■■□□□ 1.72
SCAMP4-210ENST00000588555 MACC1Q6ZN28 852 aa25.77■■□□□ 1.72
SCAMP4-210ENST00000588555 PELI3Q8N2H9 469 aa25.77■■□□□ 1.72
SCAMP4-210ENST00000588555 CCDC63Q8NA47 563 aa25.77■■□□□ 1.72
SCAMP4-210ENST00000588555 CD200R1Q8TD46 325 aa25.77■■□□□ 1.72
SCAMP4-210ENST00000588555 NUS1Q96E22 293 aa25.77■■□□□ 1.72
SCAMP4-210ENST00000588555 UNKQ9C0B0 810 aaKnown RBP25.77■■□□□ 1.72
SCAMP4-210ENST00000588555 ARHGEF3Q9NR81 526 aa25.77■■□□□ 1.72
SCAMP4-210ENST00000588555 FBXL12Q9NXK8 326 aa25.77■■□□□ 1.72
SCAMP4-210ENST00000588555 COPG2Q9UBF2 871 aa25.77■■□□□ 1.72
SCAMP4-210ENST00000588555 IQCF5A8MTL0 148 aa25.76■■□□□ 1.71
SCAMP4-210ENST00000588555 PYGLP06737 847 aa25.76■■□□□ 1.71
SCAMP4-210ENST00000588555 CHRNB1P11230 501 aa25.76■■□□□ 1.71
SCAMP4-210ENST00000588555 CLCN7P51798 805 aa25.76■■□□□ 1.71
SCAMP4-210ENST00000588555 PRKCQQ04759 706 aa25.76■■□□□ 1.71
SCAMP4-210ENST00000588555 DPTQ07507 201 aa25.76■■□□□ 1.71
SCAMP4-210ENST00000588555 CCDC15Q0P6D6 951 aa25.76■■□□□ 1.71
SCAMP4-210ENST00000588555 LRRC34Q8IZ02 419 aa25.76■■□□□ 1.71
SCAMP4-210ENST00000588555 DDHD1Q8NEL9 900 aa25.76■■□□□ 1.71
SCAMP4-210ENST00000588555 RABEP2Q9H5N1 569 aa25.76■■□□□ 1.71
SCAMP4-210ENST00000588555 G3V2L1 256 aa25.75■■□□□ 1.71
SCAMP4-210ENST00000588555 TK2O00142 265 aa25.75■■□□□ 1.71
SCAMP4-210ENST00000588555 LZTS3O60299 673 aaPredicted RBP25.75■■□□□ 1.71
SCAMP4-210ENST00000588555 ZBTB16Q05516 673 aa25.75■■□□□ 1.71
SCAMP4-210ENST00000588555 AGAP9Q5VTM2 703 aa25.75■■□□□ 1.71
SCAMP4-210ENST00000588555 PTRHD1Q6GMV3 140 aaKnown RBP25.75■■□□□ 1.71
SCAMP4-210ENST00000588555 SIDT2Q8NBJ9 832 aaKnown RBP25.75■■□□□ 1.71
SCAMP4-210ENST00000588555 LRRC8CQ8TDW0 803 aa25.75■■□□□ 1.71
SCAMP4-210ENST00000588555 BTN2A2Q8WVV5 523 aa25.75■■□□□ 1.71
SCAMP4-210ENST00000588555 MRGPRX1Q96LB2 322 aa25.75■■□□□ 1.71
SCAMP4-210ENST00000588555 SCML1Q9UN30 329 aa25.75■■□□□ 1.71
SCAMP4-210ENST00000588555 PIKFYVEQ9Y2I7 2098 aa25.75■■□□□ 1.71
SCAMP4-210ENST00000588555 H3BMM5 538 aa25.74■■□□□ 1.71
SCAMP4-210ENST00000588555 APOA4P06727 396 aa25.74■■□□□ 1.71
SCAMP4-210ENST00000588555 CHRM3P20309 590 aa25.74■■□□□ 1.71
SCAMP4-210ENST00000588555 SKIV2L2P42285 1042 aaKnown RBP25.74■■□□□ 1.71
SCAMP4-210ENST00000588555 Q6ZS52 159 aa25.74■■□□□ 1.71
SCAMP4-210ENST00000588555 NLRP8Q86W28 1048 aa25.74■■□□□ 1.71
SCAMP4-210ENST00000588555 LKAAEAR1Q8TD35 194 aa25.74■■□□□ 1.71
SCAMP4-210ENST00000588555 SYTL2Q9HCH5 934 aa25.74■■□□□ 1.71
SCAMP4-210ENST00000588555 CPSF2Q9P2I0 782 aaKnown RBP25.74■■□□□ 1.71
SCAMP4-210ENST00000588555 XPR1Q9UBH6 696 aa25.74■■□□□ 1.71
SCAMP4-210ENST00000588555 E5RI56 91 aa25.74■■□□□ 1.71
SCAMP4-210ENST00000588555 PLRG1O43660 514 aaKnown RBP25.74■■□□□ 1.71
SCAMP4-210ENST00000588555 BGNP21810 368 aa25.74■■□□□ 1.71
SCAMP4-210ENST00000588555 DRD4P21917 467 aa25.74■■□□□ 1.71
SCAMP4-210ENST00000588555 ALDH3A1P30838 453 aa25.74■■□□□ 1.71
SCAMP4-210ENST00000588555 CRY1Q16526 586 aa25.74■■□□□ 1.71
SCAMP4-210ENST00000588555 KHDC1Q4VXA5 237 aaKnown RBP25.74■■□□□ 1.71
SCAMP4-210ENST00000588555 TECRLQ5HYJ1 363 aa25.74■■□□□ 1.71
SCAMP4-210ENST00000588555 NUDCD3Q8IVD9 361 aa25.74■■□□□ 1.71
SCAMP4-210ENST00000588555 GLYATL1Q969I3 302 aa25.74■■□□□ 1.71
SCAMP4-210ENST00000588555 SIPA1Q96FS4 1042 aa25.74■■□□□ 1.71
SCAMP4-210ENST00000588555 MANSC1Q9H8J5 431 aa25.74■■□□□ 1.71
SCAMP4-210ENST00000588555 MBD1Q9UIS9 605 aaPredicted RBP25.74■■□□□ 1.71
SCAMP4-210ENST00000588555 TRMT6Q9UJA5 497 aaKnown RBP25.74■■□□□ 1.71
SCAMP4-210ENST00000588555 DHRS7Q9Y394 339 aa25.74■■□□□ 1.71
SCAMP4-210ENST00000588555 KRBA1A5PL33 1030 aa25.73■■□□□ 1.71
SCAMP4-210ENST00000588555 C19orf67A6NJJ6 358 aa25.73■■□□□ 1.71
SCAMP4-210ENST00000588555 K7ESM1 405 aa25.73■■□□□ 1.71
SCAMP4-210ENST00000588555 TSPAN12O95859 305 aa25.73■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms